Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14339
Subject:
NM_001321522.1
Aligned Length:
2911
Identities:
166
Gaps:
2733

Alignment

Query    1  ATGGCTC-TCCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  73
            ||||||| |.|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||
Sbjct    1  ATGGCTCTTTCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAAGAGTGGAAGTGCCT  74

Query   74  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGAGTTGT  147
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|.|
Sbjct   75  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCT  148

Query  148  C------AGG---------GGAGTGTC-CATTGACAGCACCTGCC-------------TCC-------------  179
            |      |.|         ||||| || |||..|||||||..|.|             |||             
Sbjct  149  CTTCCAAATGCATGATGAAGGAGT-TCTCATCAACAGCACAAGGCAATACAGAAGTGATCCACACAGGGACATT  221

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  222  GCAAAGACATGAACGTCATCACATTGGAGATTTTTGCTTCCAGGAAATGGAGAAAGATATTCATGATTTTGAGT  295

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  296  TTCAGTGGAAAGAAGATGAAAGAAATAGCCATGAAGCACCCATGACAGAAATCAAACAGTTGACGGGTAGTACA  369

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  370  AACCGACATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTCATTCGCATCT  443

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  444  GCCTGAACTCCACATGTTTCAGACCGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAGTGCTTCGT  517

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  518  TGGTTTCAACATCCCAAAGAATTTCTTGTAGGCCTAAAACCCACATTTCTAAGAACTATGGGAATAATTTCCTG  591

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  592  AATTCTTCATTACTCACACAAAAGCAGGAAGTACACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAA  665

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  666  AGCCTTTAATTATAGCTCAGTCTTAAGGAAACATCAGATAATCCATTTAGGAGCGAAACAATATAAATGTGATG  739

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  740  TGTGTGGCAAGGTCTTTAATCAAAAGCGATATCTTGCATGTCATCGTAGATGTCACACTGGCAAGAAACCTTAC  813

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  814  AAGTGTAATGATTGTGGCAAGACCTTCAGTCAGGAGTTAACCCTTACATGCCATCATAGACTTCATACTGGAGA  887

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  888  GAAACATTACAAGTGCAGTGAGTGTGGCAAGACCTTCAGTCGAAATTCAGCCCTTGTAATTCATAAGGCAATTC  961

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  962  ATACTGGAGAGAAATCTTACAAGTGTAATGAATGTGGCAAGACCTTCAGTCAAACGTCATACCTTGTGTACCAT  1035

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1036  CGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAACCT  1109

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1110  TGAAAGACATAGGAAAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGCAGCAGGACCTTTAGTCGGA  1183

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1184  AGTCATCCCTTACACGCCATCGTAGACTTCATACTGGAGAGAAACCTTATAAGTGTAATGATTGTGGCAAGACC  1257

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1258  TTCAGTCAGATGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATG  1331

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1332  TGATGAAGCTTTCAGTTTCAAATCGAACCTTGAAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAGT  1405

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1406  GTAATGATTGTGGCAAGACCTTCAGTCAGACATCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGAAA  1479

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1480  CCTTACAAATGTGAAGAATGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATAGGATAATTCATAC  1553

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1554  TGGAGAGAAACTTTACAAGTGTAATGAATGTGGCAAGACCTTTAGTCGGAAGTCATCCCTTACACGCCATTGTA  1627

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1628  GACTTCATACTGGAGAGAAACCTTACCAGTGTAATGAGTGTGGCAAAGCCTTTCGTGGGCAGTCAGCACTTATT  1701

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1702  TACCATCAAGCAATCCATGGTATAGGGAAACTTTACAAATGTAATGATTGTCACCAAGTCTTTAGTAATGCTAC  1775

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1776  AACCATTGCAAATCATTGGAGAATCCATAATGAAGAGAGATCGTACAAGTGTAATAGATGTGGCAAATTTTTCA  1849

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1850  GACATCGTTCATACCTTGCAGTTCATTGGCGAACTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTGAT  1923

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1924  GAAGCTTTCAGTTTCAAATCAAACCTTCAAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAGGTGTAA  1997

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1998  TGAATGTGGCAAGACCTTTAGTCGGAAGTCATACCTTACATGCCATCGTAGACTTCATACTGGAGAGAAACCTT  2071

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2072  ACAAGTGTAATGAGTGTGGCAAGACCTTCGGTCGAAATTCAGCCCTTATAATTCACAAGGCAATTCATACTGGA  2145

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2146  GAGAAACCTTACAAGTGTAATGAGTGTGGCAAGGCCTTCAGTCAGAAGTCATCCCTTACATGCCATCTTAGACT  2219

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2220  TCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCAAGCCTTGAAAAAC  2293

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2294  ACAGGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTTGGGCGTGATTCACAC  2367

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2368  CTGGCACAACATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGAACTTCCGTCA  2441

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2442  CAATTCAGCCCTTGTAATTCATAAGGCAATTCATAGTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGA  2515

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2516  CCTTCCGTCACAATTCAGCCCTTGAAATTCATAAGGCAATTCATACTGGAGAAAAACCTTACAAGTGTAGTGAA  2589

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2590  TGTGGCAAGGTTTTTAATAGAAAAGCAAACCTTTCACGTCATCATAGACTTCATACTGGAGAGAAACCTTACAA  2663

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2664  GTGTAATAAATGTGGTAAGGTTTTTAATCAACAAGCACACCTTGCATGTCATCATAGAATTCATACTGGAGAGA  2737

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2738  AACCTTACAAGTGTAATGAGTGTGGCAAAACCTTCCGTCACAATTCAGTCCTTGTAATTCATAAGACAATTCAT  2811

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2812  ACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAAGCAAAACTTGCACGTCATCA  2885

Query  180  -------------------------  179
                                     
Sbjct 2886  TAGAATTCATACTGGAAAGAAACAT  2910

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