Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14483
Subject:
XM_011538315.2
Aligned Length:
1163
Identities:
408
Gaps:
719

Alignment

Query    1  ---------------------------------------------------------ATGTCTACAGTGATATG  17
                                                                     |||||||||||||||||
Sbjct    1  ATGCATCTTAGGGGCTGTGAAAAGAAGCTAAAGAAGGGAGTTGAACTTGTCAAATTAATGTCTACAGTGATATG  74

Query   18  TATGAAACAAAGGGACGAAGAATTCTTGCTAACCATCAGACCTTTTGCAAACAGGATGCAGAAATCCCCTTGCT  91
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TATGAAACAAAGGGAAGAAGAATTCTTGCTAACCATCAGACCTTTTGCAAACAGGATGCAGAAATCCCCTTGCT  148

Query   92  ATATTCCCATTGTGAGCAGTGCCACCCTGTGGGATAGAAGCACACCCAGTGCAAAGCACATCCCTTGTTATGAA  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATATTCCCATTGTGAGCAGTGCCACCCTGTGGGATAGAAGCACACCCAGTGCAAAGCACATCCCTTGTTATGAA  222

Query  166  AGAACTTCAGTACCCTGCTCCAGATTCATTAATCACATGAAGAATTTCTCTGAATCTCCTAAATTTCGTAGTCT  239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGAACTTCAGTACCCTGCTCCAGATTCATTAATCACATGAAGAATTTCTCTGAATCTCCTAAATTTCGTAGTCT  296

Query  240  ACACTTTCTGAATTTTCCAGTA--TTTCCA--GAAAGGACTCA---AAATTCAATGGCGTGTAAAAGACTACTT  306
            ||||||||||||||||||||.|  |..|||  ||.|||.|.||   |||||..|.||.|         |||   
Sbjct  297  ACACTTTCTGAATTTTCCAGGAAGTCACCATGGACAGGCCACACAGAAATTACAGGGAG---------CTA---  358

Query  307  CATACTTGCCAGTACATAGTCCCCAGGTGTTCTGTAAGCACAGTTTCTTTTGATGAAGAAAGCTATGAAGAATT  380
                  ||                    |||||    .|||     ||     ||||| |.||..||||.|   
Sbjct  359  ------TG--------------------GTTCT----TCAC-----CT-----TGAAG-ATGCCTTGAATA---  388

Query  381  CCGTTCCTCTCCAGCACCATCCAGTGAAACTGATGAGGCCCCATTGATTTTTACTGCCAGAGGAGAAACTGAGG  454
               |.||||||   |.||||||..||              |||||                             
Sbjct  389  ---TCCCTCTC---CTCCATCCTTTG--------------CCATT-----------------------------  413

Query  455  AGAGAGCCAGAGG--AGCAC-CCAAGCAGGCTTGGAACAGTTCATTTTTGGAACAACTGGTTAAAAAGCCTAAC  525
                  .||||.|  |.||| ||.||.||.|.|       |||.|     |.||      ||      |||   
Sbjct  414  ------TCAGATGTCACCACTCCTAGAAGCCCT-------TTCCT-----GCAC------TT------CCT---  454

Query  526  TGGGCACACTCAG--TAAATCCTG-TTCA-CCTGGAGGCTCAGGGCATACACATCAGTAGACACACAAGACCTA  595
              |||.| |||||  |   ||||| |||| ||||.|                                      
Sbjct  455  --GGCTC-CTCAGGTT---TCCTGCTTCATCCTGCA--------------------------------------  484

Query  596  AGGGCCAGCC--CTTGAGCAGTCCCAAGAAAA-----------ATTCTGGTTCTGCCGCCAGACCTTCCACTGC  656
                ||.|||  |||||        |||||||           ||.||..||       ||.|           
Sbjct  485  ----CCTGCCTTCTTGA--------AAGAAAACAAGACATCAGATACTTATT-------CAAA-----------  528

Query  657  CATCGGCCTCTGCAGGAGGAGCCAGACGCCCGGCGCTCTGCAGAGCACCGGCCCGAGTAACACAGAGCTCGAGC  730
                                                                                      
Sbjct  529  --------------------------------------------------------------------------  528

Query  731  CGGAGGAGAGGATGGCAGTCCCAGCAGGCGCTCAGGCACACCCCGACGACATCCAAAGCAGACTCCTGGGCGCG  804
                                                                                      
Sbjct  529  --------------------------------------------------------------------------  528

Query  805  TCCGGAAATCCCGTCGGAAAAGGCGCGGTTGCCATGGCGCCGGAGATGCTCCCCAAGCATCCTCATACCCCGCG  878
                                                                                      
Sbjct  529  --------------------------------------------------------------------------  528

Query  879  GGACAGGAGGCCTCAGGCGGACACCTCCCTCCATGGCAATCTGGCAGGAGCGCCCCTTCCTCTGCTGGCCGGTG  952
                                                                                      
Sbjct  529  --------------------------------------------------------------------------  528

Query  953  CTTCCACCCATTTCCCCTCCAAGAGGTTAATAAAGGTTTGCTCCTCAGCACCCCCCCGCCCAACCCGGCGTTTC  1026
                                                                                      
Sbjct  529  --------------------------------------------------------------------------  528

Query 1027  CATACGGTTTGTTCACAGGCCCTTTCTAGGCCGGTGGTGATGCTCACTTACAT  1079
                                                                 
Sbjct  529  -----------------------------------------------------  528

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