Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14968
Subject:
NM_176830.2
Aligned Length:
1336
Identities:
1161
Gaps:
32

Alignment

Query    1  ATGGCTCGGGTGGCGTGGGGGCTGCTGTGGTTGCTGCTGGGCAGCGCCGGGGCGCAGTACGAGAAGTACAGCTT  74
            ||||||||.|.|||||||||||||||||||.||||||||||||||||||||||.|||||||||||.||||||||
Sbjct    1  ATGGCTCGCGGGGCGTGGGGGCTGCTGTGGCTGCTGCTGGGCAGCGCCGGGGCCCAGTACGAGAAATACAGCTT  74

Query   75  CCGGGGCTTCCCGCCCGAGGACCTGATGCCGCTGGCCGCGGCGTACGGGCACGCTCTGGAGCAGTACGAGGGAG  148
            |||.||.|||||.||.||||||||||||||.||||||.||||.|||||.||||||||||||||.|||||.||.|
Sbjct   75  CCGAGGATTCCCTCCGGAGGACCTGATGCCACTGGCCACGGCCTACGGCCACGCTCTGGAGCAATACGAAGGCG  148

Query  149  AGAGCTGGCGCGAGAGCGCGCGCTACCTGGAGGCGGCGCTGCGGCTGCACCGGCTCCTGCGCGACAGCGAGGCC  222
            |.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  149  AAAGCTGGCGCGAGAGCGCGCGCTACCTGGAGGCGGCGCTGCGGCTGCACCGGCTGCTGCGCGACAGCGAGGCC  222

Query  223  TTCTGCCACGCCAACTGCAGCGGCCCCGC---------------GCCCGCGGCCAAGCCCGATCCCGACGGCGG  281
            |||||||||||||||||.||.||||||||               |||||||.|| .|||||     |||||||.
Sbjct  223  TTCTGCCACGCCAACTGTAGTGGCCCCGCCACCTCTCAGCCTCGGCCCGCGTCC-GGCCCG-----GACGGCGA  290

Query  282  CC------GCGCAGACGAG---TGGGCCTGCGAGCTGCGGCTCTTCGGCCGCGTCCTGGAGCGAGCCGCCTGCC  346
            ||      |||..|.||||   |||||..|||||||||||||||||||.|.||||||||||||.||||||||||
Sbjct  291  CCACGACGGCGATGGCGAGGACTGGGCTCGCGAGCTGCGGCTCTTCGGTCACGTCCTGGAGCGCGCCGCCTGCC  364

Query  347  TGCGGCGCTGCAAGCGGACGCTGCCCGCCTTCCAGGTGCCCTACCCGCCGCGGCAGCTGCTGCGTGACTTCCAG  420
            ||||||||||||||..|||||||||||||||.||.||.||.|||||.|||||||||||||||||.|||||||||
Sbjct  365  TGCGGCGCTGCAAGAAGACGCTGCCCGCCTTTCAAGTCCCTTACCCACCGCGGCAGCTGCTGCGCGACTTCCAG  438

Query  421  AGCCGCCTGCCCTACCAGTACCTGCACTACGCGCTGTTCAAGGCTAACCGGCTGGAGAAGGCGGTGGCGGCGGC  494
            ||||||||||||||.|||||||||||||||||||..||||||||.|||||.|||||||||||||||||.|||||
Sbjct  439  AGCCGCCTGCCCTATCAGTACCTGCACTACGCGCACTTCAAGGCGAACCGACTGGAGAAGGCGGTGGCTGCGGC  512

Query  495  CTACACCTTCCTCCAGAGGAACCCGAAGCACGAGCTGACCGCCAAGTATCTCAACTACTATCA-GGGGATGCTG  567
            ||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct  513  CTACACCTTCCTCCAGAGGAACCCCAAGCACGAGCTGACCGCCAAGTATCTCAACTACTA-CAGGGGGATGCTG  585

Query  568  GACGTCGCCGACGAGTCCCTCACGGACCTAGAGGCCCAGCCCTACGAGGCCGTGTTCCTCCGGGCTGTGAAGCT  641
            ||..|.|..||.|||||||||||.|||||.||||||||||||||||||||.||||||||||||||||||||.||
Sbjct  586  GATATTGGAGATGAGTCCCTCACCGACCTGGAGGCCCAGCCCTACGAGGCTGTGTTCCTCCGGGCTGTGAAACT  659

Query  642  CTACAACAGCGGGGATTTCCGCAGCAGCACGGAGGACATGGAGCGGGCCTTGTCAGAGTACCTGGCAGTCTTTG  715
            .||||||||||||||.||.|||||||||||.||.|||||||||||||||.||.|.||.||..||.|.|||||||
Sbjct  660  TTACAACAGCGGGGACTTTCGCAGCAGCACAGAAGACATGGAGCGGGCCCTGGCTGAATATATGACGGTCTTTG  733

Query  716  CCCGGTGCCTGGCCGGCTGTGAAGGGGCCCATGAGCAGGTGGACTTCAAGGACTTCTACCCGGCCATAGCAGAT  789
            |.|||||.||.||.||||||||.||||||||.||||||||.||||||||||||||||||||.||.|||||||||
Sbjct  734  CTCGGTGTCTAGCTGGCTGTGAGGGGGCCCACGAGCAGGTAGACTTCAAGGACTTCTACCCAGCGATAGCAGAT  807

Query  790  CTCTTTGCAGAGTCCCTGCAGTGCAAGGTGGACTGTGAGGCCAATTTGACCCCCAATGTGGGTGGCTACTTCGT  863
            |||||.|||||.|||||||||||||||||||||||||||.|||||.|.||||||||.||.|||||||.|||.||
Sbjct  808  CTCTTCGCAGAATCCCTGCAGTGCAAGGTGGACTGTGAGACCAATCTCACCCCCAACGTAGGTGGCTTCTTTGT  881

Query  864  GGACAAGTTCGTGGCCACCATGTACCACTACCTGCAGTTTGCCTACTATAAGTTGAATGATGTGCGCCAGGCTG  937
            |||||||||.||||||||||||||.|||||||||||||||||||||||.||..||||||||||.||||||||||
Sbjct  882  GGACAAGTTTGTGGCCACCATGTATCACTACCTGCAGTTTGCCTACTACAAACTGAATGATGTACGCCAGGCTG  955

Query  938  CCCGCAGCGCCGCCAGCTACATGCTCTTCGACCCCAAGGACAGCGTCATGCAGCAGAACCTGGTGTATTACCGG  1011
            |||||||.||.||.||||||||||||||.|||||||||||||||||.|||||||||||||||||.||||||||.
Sbjct  956  CCCGCAGTGCTGCTAGCTACATGCTCTTTGACCCCAAGGACAGCGTTATGCAGCAGAACCTGGTATATTACCGC  1029

Query 1012  TTCCACCGGGCTCGCTGGGGCCTGGAAGAGGAGGACTTCCAGCCCCGGGAGGAGGCCATGCTCTACCACAACCA  1085
            |||||||||||||||||||||||.|||||.||||||||.||.|||||||||||.||.|||||||||||||||||
Sbjct 1030  TTCCACCGGGCTCGCTGGGGCCTTGAAGACGAGGACTTTCAACCCCGGGAGGAAGCTATGCTCTACCACAACCA  1103

Query 1086  GACCGCCGAGCTGCGGGAGCTGCTGGAGTTCACCCACATGTACCTGCAGTCAGATGATGAGATGGAGCTGGAGG  1159
            ||||.|.|||||.||||||.||||.||.|||||.|||||||||||.||||||||.|||||||||||.|||||||
Sbjct 1104  GACCTCTGAGCTCCGGGAGTTGCTAGACTTCACACACATGTACCTTCAGTCAGACGATGAGATGGAACTGGAGG  1177

Query 1160  AGACAGAACCGCCCCTGGAGCCTGAGGATGCCCTATCTGACGCCGAGTTTGAGGGGGAGGGTGACTACGAGGAG  1233
            ||||||||.|.|.||..||||||||.||..|.||||||||.||.|||||.||.||.|||||.|||||.|||||.
Sbjct 1178  AGACAGAATCACTCCCAGAGCCTGAAGAACCTCTATCTGATGCTGAGTTCGAAGGCGAGGGCGACTATGAGGAA  1251

Query 1234  GGCATGTATGCTGACTGGTGGCAGGAGCCGGATGCCAAGGGTGACGAGGCCGAGGCTGAGCCAGAGTCTGAACT  1307
            ||..|.|||||||||||||||||.|||||.||.|||||||||||||||||||||||.|||||||||.|||||||
Sbjct 1252  GGTCTCTATGCTGACTGGTGGCAAGAGCCAGAAGCCAAGGGTGACGAGGCCGAGGCCGAGCCAGAGCCTGAACT  1325

Query 1308  CGCA  1311
            ..||
Sbjct 1326  GACA  1329

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