Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15013
Subject:
XM_006524693.2
Aligned Length:
4207
Identities:
1518
Gaps:
2489

Alignment

Query    1  ATGTCTGCGGAGAGCGGCCCTGGGACGAGATTGAGAAATCTGCCAGTAATGGGGGATGGACTAGAAACTTCCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AATGTCTACAACACAGGCCCAGGCCCAACCCCAGCCAGCCAACGCAGCCAGCACCAACCCCCCGCCCCCAGAGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCTCCAACCCTAACAAGCCCAAGAGGCAGACCAACCAACTGCAATACCTGCTCAGAGTGGTGCTCAAGACACTA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGGAAACACCAGTTTGCATGGCCTTTCCAGCAGCCTGTGGATGCCGTCAAGCTGAACCTCCCTGATTACTATAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GATCATTAAAACGCCTATGGATATGGGAACAATAAAGAAGCGCTTGGAAAACAACTATTACTGGAATGCTCAGG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AATGTATCCAGGACTTCAACACTATGTTTACAAATTGTTACATCTACAACAAGCCTGGAGATGACATAGTCTTA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ATGGCAGAAGCTCTGGAAAAGCTCTTCTTGCAAAAAATAAATGAGCTACCCACAGAAGAAACCGAGATCATGAT  518
            |||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||||||||.|||||||||||
Sbjct    1  ATGGCAGAAGCTCTGGAGAAGCTCTTCTTGCAAAAAATCAATGAACTGCCTACAGAAGAAACTGAGATCATGAT  74

Query  519  AGTCCAGGCAAAAGGAAGAGGACGTGGGAGGAAAGAAACAGGGACAGCAAAACCTGGCGTTTCCACGGTACCAA  592
            ||||||||||||||||||||||||.||||||||||||||||||.|||||||.|||||.||.|||||||||||||
Sbjct   75  AGTCCAGGCAAAAGGAAGAGGACGAGGGAGGAAAGAAACAGGGGCAGCAAAGCCTGGTGTATCCACGGTACCAA  148

Query  593  ACACAACTCAAGCATCGACTCCTCCGCAGACCCAGACCCCTCAGCCGAA---TCCTCCTCCTGTGCAGGCCACG  663
            ||||||||||||||||.|||.||||||||||||||||.|||||||.|||   ||||||.||||||||||||||.
Sbjct  149  ACACAACTCAAGCATCAACTTCTCCGCAGACCCAGACGCCTCAGCAGAACCCTCCTCCACCTGTGCAGGCCACA  222

Query  664  CCTCACCCCTTCCCTGCCGTCACCCCGGACCTCATCGTCCAGACCCCTGTCATGACAGTGGTGCCTCCCCAGCC  737
            .||||||||||.|||||.||||||||.||||||||.|.||||.|.||||||||||||.|||||||.||.|||||
Sbjct  223  ACTCACCCCTTTCCTGCTGTCACCCCAGACCTCATTGCCCAGCCTCCTGTCATGACAATGGTGCCCCCTCAGCC  296

Query  738  ACTGCAGACGCC--CCCCGCCAGTGCCCCCCCAGCCACAACCCCAACCCGCTTCAGCTCCCCAGCCCGTACAGA  809
            |||.|||||.||  |.|||   ||.|||||||||||||.|||||.|||.|||.|||.|||.|||||.||.||||
Sbjct  297  ACTTCAGACTCCTTCACCG---GTACCCCCCCAGCCACCACCCCCACCTGCTCCAGTTCCACAGCCTGTGCAGA  367

Query  810  GCCACCCACCCATCATCGCGGCCACCCCACAGCCTGTGAAGACAAAGAAGGGAGTGAAGAGGAAAGCAGACACC  883
            |.|||||.||||||||.|||.|||||||.||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct  368  GTCACCCGCCCATCATTGCGACCACCCCCCAGCCTGTGAAGACAAAGAAAGGGGTGAAGAGGAAAGCAGATACC  441

Query  884  ACCACCCCCACCACCATTGACCCCATTCACGAGCCACCCTCGCTGCCCCCGGAGCCCAAGACCACCAAGCTGGG  957
            ||||||||.||||||||.|||||||||||.|||||||||||.|||.||||.||||||||||||.||||||||||
Sbjct  442  ACCACCCCTACCACCATCGACCCCATTCATGAGCCACCCTCACTGGCCCCAGAGCCCAAGACCGCCAAGCTGGG  515

Query  958  CCAGCGGCGGGAGAGCAGCCGGCCTGTGAAACCTCCAAAGAAGGACGTGCCCGACTCTCAGCAGCACCCAGCAC  1031
            .|..|||||||||||||||.|.||||||||.||||||||||||||.||.||.|||||.|||||||||||||..|
Sbjct  516  TCCTCGGCGGGAGAGCAGCAGACCTGTGAAGCCTCCAAAGAAGGATGTACCGGACTCACAGCAGCACCCAGGGC  589

Query 1032  CAGAGAAGAGCAGCAAGGTCTCGGAGCAGCTCAAGTGCTGCAGCGGCATCCTCAAGGAGATGTTTGCCAAGAAG  1105
            |||||||||||||||||.||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.
Sbjct  590  CAGAGAAGAGCAGCAAGATCTCTGAGCAGCTAAAGTGCTGCAGTGGCATCCTCAAGGAGATGTTTGCCAAGAAA  663

Query 1106  CACGCCGCCTACGCCTGGCCCTTCTACAAGCCTGTGGACGTGGAGGCACTGGGCCTACACGACTACTGTGACAT  1179
            ||.||.|||||.||||||||.|||||||||||||||||.||||||||||||||.||.|||||||||||||||||
Sbjct  664  CATGCTGCCTATGCCTGGCCTTTCTACAAGCCTGTGGATGTGGAGGCACTGGGTCTGCACGACTACTGTGACAT  737

Query 1180  CATCAAGCACCCCATGGACATGAGCACAATCAAGTCTAAACTGGAGGCCCGTGAGTACCGTGATGCTCAGGAGT  1253
            ||||||.||.||||||||||||||||||||||||||||||||.|||.||||.||||||.|.|||||.|||||.|
Sbjct  738  CATCAAACATCCCATGGACATGAGCACAATCAAGTCTAAACTAGAGTCCCGAGAGTACAGAGATGCCCAGGAAT  811

Query 1254  TTGGTGCTGACGTCCGATTGATGTTCTCCAACTGCTATAAGTACAACCCTCCTGACCATGAGGTGGTGGCCATG  1327
            ||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||
Sbjct  812  TTGGTGCTGATGTCCGATTGATGTTCTCCAACTGCTACAAGTACAACCCCCCTGACCATGAAGTGGTAGCCATG  885

Query 1328  GCCCGCAAGCTCCAGGATGTGTTCGAAATGCGCTTTGCCAAGATGCCGGACGAGCCTGAGGAGCCAGTGGTGGC  1401
            ||.||.||.||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||.||..|
Sbjct  886  GCTCGAAAACTCCAGGATGTGTTTGAAATGCGCTTTGCCAAGATGCCTGATGAGCCTGAAGAGCCAGTTGTTAC  959

Query 1402  CGTGTCCTCCCCCGGCAGTGCTCCCTCCCACCAAGGTTGTGGCCCCGCCCTCATCCCAGCGACAGCAGCAGCGA  1475
            .||||||| |.||.|||||||..||.||.||.|||||.||.|||||.||||||| |.||.||||||||||||||
Sbjct  960  AGTGTCCT-CTCCTGCAGTGCCACCCCCTACAAAGGTGGTAGCCCCACCCTCAT-CTAGTGACAGCAGCAGCGA  1031

Query 1476  TAGCTCCTCGGACAGTGACAGTTCGACTGATGACTCTGAGGAGGAGCGAGCCCAGCGGCTGGCTGAGCTCCAGG  1549
            .||.||.||.|||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||||
Sbjct 1032  CAGTTCTTCCGACAGCGACAGTTCCACTGACGACTCTGAGGAAGAGCGAGCCCAGCGGCTGGCTGAACTCCAGG  1105

Query 1550  AGCAGCTCAAAGCCGTGCACGAGCAGCTTGCAGCCCTCTCTCAGCCCCAGCAGAACAAACCAAAGAAAAAGGAG  1623
            |.||||||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1106  AACAGCTCAAGGCCGTGCATGAGCAGCTTGCAGCCCTCTCACAGCCCCAGCAGAACAAACCAAAGAAAAAGGAG  1179

Query 1624  AAAGACAAGAAGGAAAAGAAAAAAGAAAAGCACAAAAGGAAAGAGGAAGTGGAAGAGAATAAAAAAAGCAAAGC  1697
            ||.||||||||||||||||||||.|||||||||||||.||||||.||||||||.||.|||||||||||||||.|
Sbjct 1180  AAGGACAAGAAGGAAAAGAAAAAGGAAAAGCACAAAAAGAAAGAAGAAGTGGAGGAAAATAAAAAAAGCAAAAC  1253

Query 1698  CAAGGAACCTCCTCCTAAAAAGACGAAGAAAAATAATAGCAGCAACAGCAATGTGAGCAAGAAGGAGCCAGCGC  1771
            ||||||||.||||||.||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||..|
Sbjct 1254  CAAGGAACTTCCTCCCAAAAAGACAAAGAAAAATAACAGCAGCAACAGCAATGTGAGCAAGAAGGAACCAGTAC  1327

Query 1772  CCATGAAGAGCAAGCCCCCTCCCACGTATGAGTCGGAGGAAGAGGACAAGTGCAAGCCTATGTCCTATGAGGAG  1845
            |||.|||||.||||||.||||||||.|||||.||.||.||.|||||.|||||.|||||.|||||.|||||||||
Sbjct 1328  CCACGAAGACCAAGCCGCCTCCCACATATGAATCAGAAGAGGAGGATAAGTGTAAGCCCATGTCTTATGAGGAG  1401

Query 1846  AAGCGGCAGCTCAGCTTGGACATCAACAAGCTCCCCGGCGAGAAGCTGGGCCGCGTGGTGCACATCATCCAGTC  1919
            |||||||||||.||..|.||.||||||||.||.||.||.||||||||.|||||.||.||.|||||.||.|||||
Sbjct 1402  AAGCGGCAGCTAAGTCTAGATATCAACAAACTTCCTGGTGAGAAGCTAGGCCGTGTAGTACACATAATTCAGTC  1475

Query 1920  ACGGGAGCCCTCCCTGAAGAATTCCAACCCCGACGAGATTGAAATCGACTTTGAGACCCTGAAGCCGTCCACAC  1993
            |.||||.||.||.||.||.||.|||||||||||.||||||||.||.||||||||||||||||||||.||.||||
Sbjct 1476  AAGGGAACCATCACTTAAAAACTCCAACCCCGATGAGATTGAGATTGACTTTGAGACCCTGAAGCCATCTACAC  1549

Query 1994  TGCGTGAGCTGGAGCGCTATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAGAAAGTTGATGTG  2067
            |.||.|||.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||
Sbjct 1550  TACGAGAGTTGGAGCGATATGTCACCTCCTGTTTGCGGAAGAAAAGGAAACCTCAAGCTGAAAAAGTTGACGTG  1623

Query 2068  ATTGCCGGCTCCTCCAAGATGAAGGGCTTCTCGTCCTCAGAGTCGGAGAGCTCCAGTGAGTCCAGCTCCTCTGA  2141
            |||||.||.||.||||||||||||||.|||||.|||||.||||||||||||.||||.||.||||||||||||||
Sbjct 1624  ATTGCTGGTTCTTCCAAGATGAAGGGATTCTCATCCTCTGAGTCGGAGAGCACCAGCGAATCCAGCTCCTCTGA  1697

Query 2142  CAGCGAAGACTCCGAAACA-----GGTCCTGCC-----------------------------------------  2169
            |||.||||||||.||||||     ||  ||.||                                         
Sbjct 1698  CAGTGAAGACTCTGAAACAGAGATGG--CTCCCAAGTCAAAAAAGAAGGGGCACACTGGGAGGGACCAGAAAAA  1769

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 1770  GCATCATCACCATCACCATCCACAGATGCAGCCAGCCCCAGCTCCTGTGCCCCAGCAGCCGCCCCCACCTCCAC  1843

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 1844  AGCAGCCTCCTCCACCCCCACCTCCGCAGCAGCAGCAGCAGCAACCTCCACCCCCACCACCTCCGCCCTCCATG  1917

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 1918  CCACAGCAGACTGCCCCAGCGATGAAGTCCTCGCCCCCACCCTTCATCACTGCCCAGGTCCCCGTCCTGGAACC  1991

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 1992  ACAGCTGCCAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCACCTGCCGCAGCCGGAGC  2065

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2066  TGCCTCCTCACCTGCCCCAGCCACCTGAGCACAGCACTCCACCCCATCTCAACCAGCATGCTGTGGTCTCTCCT  2139

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2140  CCAGCTTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACCGAGCTGCTGCTCTGCCCCCAAAGCC  2213

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2214  TACCCGACCCCCAGCTGTGTCCCCTGCCCTGGCCCAGCCCCCCCTGCTCCCACAACCACCAATGGCTCAGCCCC  2287

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2288  CCCAAGTGCTGCTGGAGGATGAAGAGCCACCTGCCCCACCCCTCACCTCCATGCAGATGCAGTTGTACCTACAG  2361

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2362  CAGCTGCAGAAGGTGCAGCCTCCCACACCACTACTCCCTTCCGTGAAGGTGCAGTCCCAACCCCCACCGCCTTT  2435

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2436  GCCGCCTCCACCCCACCCTTCTGTGCAGCAGCAGCAGCTCCAGCCACAGCCACCGCCACCCCCACCTCCTCAGC  2509

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2510  CACAGCCACCACCCCAGCAACAACACCAGCCTCCACCACGACCAGTTCACTTGCCATCCATGCCCTTTTCTGCT  2583

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2584  CATATTCAGCAGCCCCCACCACCCCCAGGACAGCAACCTACTCACCCACCCCCAGGACAGCAGCCCCCACCACC  2657

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2658  ACAGCCTGCCAAGCCCCAGCAAGTCATCCAGCATCACCCTTCCCCCCGGCACCACAAGTCAGACCCCTACTCAG  2731

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2732  CTGGTCATCTTCGTGAGGCTCCCTCTCCGCTTATGATACATTCCCCTCAGATGCCACAGTTCCAGAGCCTGACC  2805

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2806  CATCAGTCTCCTCCCCAGCAAAACGTCCAGCCTAAGAAGCAGGTAAAGGGCAGGGCTGAGCCACAGCCACCAGG  2879

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2880  GCCAGTCATGGGCCAAGGCCAGGGATGCCCACCTGCCTCACCGGCTGCCGTGCCTATGCTGTCCCAGGAGCTGC  2953

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 2954  GACCACCTTCAGTCGTCCAGCCCCAGCCCCTGGTGGTAGTAAAGGAGGAGAAGATTCACTCACCAATCATTCGC  3027

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3028  AGCGAGCCTTTCAGCACCTCACTTCGACCAGAGCCCCCCAAGCACCCAGAGAACATCAAGGCCCCAGTCCACCT  3101

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3102  GCCCCAGCGGCCTGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATCCGGCCTCCAGAGCAGAGTGCACCCC  3175

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3176  CACCAGGGGCCCCTGACAAGGACAAACAGAAGCAGGAGCCAAAAACACCAGTGGCACCCAAAAAGGACCTGAAA  3249

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3250  ATTAAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCACCCCATCCTCCACAGCCAAGTCCTC  3323

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3324  AAGTGACAGCTTTGAGCATTTCCGCCGTGCTGCTCGGGAGAAGGAGGAGAGGGAAAAGGCCCTGAAGGCTCAGG  3397

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3398  CTGAGCATGCAGAGAAGGAGAAGGAGCGGCTGAGGCAGGAGCGCATGAGGAGCCGAGAGGATGAAGATGCGCTG  3471

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3472  GAACAGGCACGTCGAGCCCATGAGGAGGCACGACGGCGCCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGAGACA  3545

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3546  GGAGCAGCAGCAGCAGCAGCAGCAGGCAGCTGCTGTGGCCGCTGCCTCTGCCCCCCAGGCCCAGAGCTCCCAGC  3619

Query 2170  --------------------------------------------------------------------------  2169
                                                                                      
Sbjct 3620  CCCAGTCTATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCAGGAGCGGAGGCGCAGGGAGGCAATG  3693

Query 2170  ---------------------------------------------------------------  2169
                                                                           
Sbjct 3694  GCAGCTACAATTGACATGAATTTCCAGAGTGATCTTTTGTCAATATTTGAAGAAAATCTTTTT  3756

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