Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15026
Subject:
XM_011509394.2
Aligned Length:
2793
Identities:
2014
Gaps:
774

Alignment

Query    1  ATGGAGGGCGACGGGGTGCCATGGGGCAGCGAGCCCGTCTCGGGTCCCGGCCCCGGCGGCGGCGGAATGATCCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGAGCTGTGCCGGGGCTTCGGCCGCTACCGCCGCTACCTGGGACGGCTGCGACAGAACCTGCGCGAGACCCAGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGTTCTTCCGCGACATCAAGTGCTCCCACAACCACACTTGTCTCTCCTCCCTCACGGGCGGCGGCGGGGCCGAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGCGGCCCTGCAGGCGATGTCGCCGAAACCGGGCTGCAGGCGGGCCAACTGAGCTGCATTTCCTTCCCACCTAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGAAGAGAAGTACCTCCAGCAGATTGTGGACTGCCTCCCTTGCATACTGATCCTCGGCCAGGATTGTAACGTCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGTGCCAGCTGTTGAATCTGCTGTTGGGGGTGCAGGTGCTTCCCACCACCAAGCTGGGCAGTGAGGAGAGCTGT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AAGCTTCGGCGCCTCCGCTTCACCTATGGGACTCAGACTCGGGTCAGCCTGGCGCTCCCTGGACAGTATGAACT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AGTGCACACGCTGGTTGCTCATCAGGGCAACTGGGAGACCATCCCTGAGGAGGATCTGGAGGTCCAAGAGAACA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  ATGAGGATGCTGCTCATGTTTTAGCGGAA------CTGGAGGTAACGATGCACCATGCTCTCTTACAGGAAGTG  660
                           |||   |.||.|||      |||.|||                       |.|||||||
Sbjct    1  ---------------ATG---TCGCCGAAACCGGGCTGCAGG-----------------------CGGGAAGTG  33

Query  661  GACGTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCACAGTGGATGTTCTGGGTGACTTGGTGAATGATTTCTT  734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   34  GACGTTGTGGTAGCACCATGCCAAGGCCTCCGGCCCACAGTGGATGTTCTGGGTGACTTGGTGAATGATTTCTT  107

Query  735  GCCTGTGATAACCTATGCACTCCACAAAGATGAACTCTCTGAGAGGGATGAGCAAGAGCTTCAGGAAATCCGAA  808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  108  GCCTGTGATAACCTATGCACTCCACAAAGATGAACTCTCTGAGAGGGATGAGCAAGAGCTTCAGGAAATCCGAA  181

Query  809  AGTATTTCTCCTTTCCTGTATTCTTTTTCAAAGTGCCGAAACTGGGCTCGGAGATAATAGACTCCTCAACCAGG  882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  182  AGTATTTCTCCTTTCCTGTATTCTTTTTCAAAGTGCCGAAACTGGGCTCGGAGATAATAGACTCCTCAACCAGG  255

Query  883  AGAATGGAGAGCGAAAGATCACCGCTTTATCGCCAGCTAATTGACCTGGGCTATCTGAGCAGCAGTCACTGGAA  956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  256  AGAATGGAGAGCGAAAGATCACCGCTTTATCGCCAGCTAATTGACCTGGGCTATCTGAGCAGCAGTCACTGGAA  329

Query  957  CTGTGGGGCTCCTGGCCAGGATACTAAAGCTCAGAGCATGTTGGTGGAACAGAGTGAAAAGCTGAGACACTTGA  1030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  330  CTGTGGGGCTCCTGGCCAGGATACTAAAGCTCAGAGCATGTTGGTGGAACAGAGTGAAAAGCTGAGACACTTGA  403

Query 1031  GCACATTTTCTCACCAGGTGTTACAGACTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCAC  1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  404  GCACATTTTCTCACCAGGTGTTACAGACTCGCCTGGTGGATGCAGCCAAGGCCCTGAACCTGGTGCACTGCCAC  477

Query 1105  TGCCTTGACATCTTTATTAACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGGAATA  1178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  478  TGCCTTGACATCTTTATTAACCAGGCATTTGACATGCAGCGGGACCTGCAGATCACTCCCAAACGTCTGGAATA  551

Query 1179  TACTCGAAAAAAGGAGAATGAGTTGTATGAATCATTGATGAATATTGCCAACCGAAAGCAGGAGGAAATGAAGG  1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  TACTCGAAAAAAGGAGAATGAGTTGTATGAATCATTGATGAATATTGCCAACCGAAAGCAGGAGGAAATGAAGG  625

Query 1253  ATATGATTGTTGAGACACTTAATACCATGAAGGAGGAACTTCTGGATGATGCTACTAACATGGAGTTTAAAGAC  1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  626  ATATGATTGTTGAGACACTTAATACCATGAAGGAGGAACTTCTGGATGATGCTACTAACATGGAGTTTAAAGAC  699

Query 1327  GTCATTGTCCCTGAGAATGGAGAACCAGTAGGCACCAGAGAGATCAAATGCTGCATCCGACAGATCCAGGAACT  1400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  700  GTCATTGTCCCTGAGAATGGAGAACCAGTAGGCACCAGAGAGATCAAATGCTGCATCCGACAGATCCAGGAACT  773

Query 1401  CATCATCTCCCGACTTAATCAGGCAGTGGCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGGGAAAGCTTCG  1474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  774  CATCATCTCCCGACTTAATCAGGCAGTGGCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGGGAAAGCTTCG  847

Query 1475  TCGGAACCCTGGAACGATGTCTGCAGAGCCTGGAGAAGTCTCAGGATGTCTCAGTTCACATCACCAGTAATTAT  1548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  848  TCGGAACCCTGGAACGATGTCTGCAGAGCCTGGAGAAGTCTCAGGATGTCTCAGTTCACATCACCAGTAATTAT  921

Query 1549  CTCAAACAGATCTTAAATGCTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGTCGTCAGTTACAAGGATGCT  1622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  922  CTCAAACAGATCTTAAATGCTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGTCGTCAGTTACAAGGATGCT  995

Query 1623  ATGGGAGCAAATCAAACAGATCATCCAGCGCATCACATGGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGA  1696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  996  ATGGGAGCAAATCAAACAGATCATCCAGCGCATCACATGGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGA  1069

Query 1697  GGAAGGTGGCCCAGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGG  1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1070  GGAAGGTGGCCCAGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGG  1143

Query 1771  ACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCTGGAAGCTGGCCACTCAGGCCGGTT  1844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144  ACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCTGGAAGCTGGCCACTCAGGCCGGTT  1217

Query 1845  AGAGAAAACGGAAGATCTATGGCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGCCCGCCTTTCTCTGGAAA  1918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1218  AGAGAAAACGGAAGATCTATGGCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGCCCGCCTTTCTCTGGAAA  1291

Query 1919  GCCGTTCTTTACAGGATGTCTTGCTTCATCGTAAACCTAAACTGGGACAGGAACTGGGCCGGGGCCAGTATGGT  1992
            ||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292  GCTGTTCTTTACAGGATGTCTTGCTTCATCGTAAACCTAAACTGGGACAGGAACTGGGCCGGGGCCAGTATGGT  1365

Query 1993  GTGGTATACCTGTGTGACAACTGGGGAGGACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTCCAGATGAGAA  2066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366  GTGGTATACCTGTGTGACAACTGGGGAGGACACTTCCCTTGTGCCCTCAAATCAGTTGTCCCTCCAGATGAGAA  1439

Query 2067  GCACTGGAATGATCTGGCTTTGGAATTTCACTATATGAGGTCTCTGCCGAAGCATGAGCGATTGGTGGATCTCC  2140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440  GCACTGGAATGATCTGGCTTTGGAATTTCACTATATGAGGTCTCTGCCGAAGCATGAGCGATTGGTGGATCTCC  1513

Query 2141  ATGGTTCAGTCATTGACTACAACTATGGTGGTGGCTCCAGCATTGCTGTGCTCCTCATTATGGAGCGGCTACAC  2214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514  ATGGTTCAGTCATTGACTACAACTATGGTGGTGGCTCCAGCATTGCTGTGCTCCTCATTATGGAGCGGCTACAC  1587

Query 2215  CGGGATCTCTACACAGGGCTGAAGGCTGGGCTGACCCTGGAGACACGTTTGCAGATAGCACTAGATGTGGTGGA  2288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588  CGGGATCTCTACACAGGGCTGAAGGCTGGGCTGACCCTGGAGACACGTTTGCAGATAGCACTAGATGTGGTGGA  1661

Query 2289  GGGAATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAAAAATGTGCTGCTGGATAAGC  2362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662  GGGAATCCGCTTCCTGCACAGCCAGGGACTTGTCCATCGTGATATCAAACTGAAAAATGTGCTGCTGGATAAGC  1735

Query 2363  AGAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGGACA  2436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736  AGAACCGTGCCAAGATCACTGACTTAGGATTCTGCAAGCCAGAGGCCATGATGTCAGGCAGCATTGTGGGGACA  1809

Query 2437  CCAATCCATATGGCCCCTGAACTTTTCACA--------------------------------------------  2466
            ||||||||||||||||||||||||||||||                                            
Sbjct 1810  CCAATCCATATGGCCCCTGAACTTTTCACAGGGAAGTACGATAATTCCGTGGATGTCTACGCTTTTGGAATTCT  1883

Query 2467  --------------------------------------------------------------------------  2466
                                                                                      
Sbjct 1884  TTTCTGGTATATCTGCTCAGGCTCTGTCAAGCTCCCTGAGGCATTTGAGAGGTGTGCTAGCAAAGACCATCTCT  1957

Query 2467  -----------------GGGGCTCGCCCAGAACGTCTTCCTGTGTTTGATGAGGAGTGCTGGCAGTTGATGGAA  2523
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1958  GGAACAATGTGCGGAGGGGGGCTCGCCCAGAACGTCTTCCTGTGTTTGATGAGGAGTGCTGGCAGTTGATGGAA  2031

Query 2524  GCCTGTTGGGATGGCGACCCCTTGAAGAGGCCTCTCTTGGGCATTGTCCAGCCCATGCTCCAGGGCATCATGAA  2597
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2032  GCCTGTTGGGATGGCGACCCCTTGAAGAGGCCTCTCTTGGGCATTGTCCAGCCCATGCTCCAGGGCATCATGAA  2105

Query 2598  TCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGATTCTACT  2652
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2106  TCGGCTCTGCAAGTCCAATTCTGAGCAGCCAAACAGAGGACTAGATGATTCTACT  2160

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