Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15076
Subject:
NM_017420.5
Aligned Length:
2343
Identities:
2280
Gaps:
63

Alignment

Query    1  ---------------------------------------------------------------ATGGAAAGCGC  11
                                                                           |||||||||||
Sbjct    1  ATGTCCTCTTCCTCCCCCACCGGGCAGATCGCAAGTGCGGCGGACATCAAGCAAGAGAATGGGATGGAAAGCGC  74

Query   12  CTCGGAAGGGCAGGAGGCGCACCGAGAAGTGGCGGGGGGCGCGGCGGTAGGGCTGAGCCCCCCGGCTCCAGCCC  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTCGGAAGGGCAGGAGGCGCACCGAGAAGTGGCGGGGGGCGCGGCGGTAGGGCTGAGCCCCCCGGCTCCAGCCC  148

Query   86  CTTTTCCCCTGGAGCCGGGGGACGCCGCGACCGCTGCCGCCAGGGTGAGCGGAGAGGAAGGGGCAGTGGCGGCG  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTTTTCCCCTGGAGCCGGGGGACGCCGCGACCGCTGCCGCCAGGGTGAGCGGAGAGGAAGGGGCAGTGGCGGCG  222

Query  160  GCGGCGGCCGGAGCGGCGGCGGATCAGGTACAACTCCACTCGGAACTTCTGGGCAGGCACCACCACGCCGCCGC  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCGGCGGCCGGAGCGGCGGCGGATCAGGTACAACTCCACTCGGAACTTCTGGGCAGGCACCACCACGCCGCCGC  296

Query  234  CGCCGCCGCGCAGACCCCGCTGGCCTTCTCGCCCGACCACGTCGCCTGCGTGTGCGAGGCACTGCAGCAGGGGG  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGCCGCCGCGCAGACCCCGCTGGCCTTCTCGCCCGACCACGTCGCCTGCGTGTGCGAGGCACTGCAGCAGGGGG  370

Query  308  GCAACCTGGACCGCCTGGCCCGGTTCCTGTGGTCCCTGCCCCAGAGCGACCTGCTACGTGGCAACGAGAGCCTG  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCAACCTGGACCGCCTGGCCCGGTTCCTGTGGTCCCTGCCCCAGAGCGACCTGCTACGTGGCAACGAGAGCCTG  444

Query  382  CTGAAGGCGCGGGCGCTCGTGGCCTTCCACCAGGGCATCTACCCCGAGCTCTACAGCATCCTCGAGAGCCACAG  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGAAGGCGCGGGCGCTCGTGGCCTTCCACCAGGGCATCTACCCCGAGCTCTACAGCATCCTCGAGAGCCACAG  518

Query  456  CTTCGAGTCGGCCAACCACCCGCTGCTGCAGCAGCTCTGGTACAAGGCGCGCTACACCGAGGCCGAGCGAGCCC  529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTTCGAGTCGGCCAACCACCCGCTGCTGCAGCAGCTCTGGTACAAGGCGCGCTACACCGAGGCCGAGCGAGCCC  592

Query  530  GCGGCCGGCCGCTGGGAGCCGTAGACAAGTACCGGCTGCGCAGGAAATTCCCCCTGCCCCGCACCATCTGGGAC  603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCGGCCGGCCGCTGGGAGCCGTAGACAAGTACCGGCTGCGCAGGAAATTCCCCCTGCCCCGCACCATCTGGGAC  666

Query  604  GGCGAGGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCAACGCGCTCAAGGAGCTCTACAAGCAGAATCGCTA  677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGCGAGGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCAACGCGCTCAAGGAGCTCTACAAGCAGAATCGCTA  740

Query  678  CCCTTCGCCCGCCGAGAAGCGGCACCTGGCCAAGATCACCGGCCTCTCCCTCACCCAGGTCAGCAACTGGTTCA  751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCTTCGCCCGCCGAGAAGCGGCACCTGGCCAAGATCACCGGCCTCTCCCTCACCCAGGTCAGCAACTGGTTCA  814

Query  752  AGAACCGCCGGCAGCGCGACAGGAACCCCTCCGAGACCCAGTCCAAAAGTGAGTCAGATGGCAACCCCAGCACT  825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGAACCGCCGGCAGCGCGACAGGAACCCCTCCGAGACCCAGTCCAAAAGTGAGTCAGATGGCAACCCCAGCACT  888

Query  826  GAAGATGAATCCAGCAAGGGACATGAGGATTTATCTCCTCACCCACTCTCCAGTTCATCTGATGGCATCACCAA  899
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAAGATGAATCCAGCAAGGGACATGAGGATTTATCTCCTCACCCACTCTCCAGTTCATCTGATGGCATCACCAA  962

Query  900  CCTCAGCCTTTCCAGTCATATGGAGCCAGTATATATGCAACAAATTGGAAATGCTAAGATATCATTAAGCTCTT  973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTCAGCCTTTCCAGTCATATGGAGCCAGTATATATGCAACAAATTGGAAATGCTAAGATATCATTAAGCTCTT  1036

Query  974  CTGGAGTTCTGTTGAATGGAAGCTTGGTACCTGCAAGTACTTCACCTGTCTTCCTTAATGGAAATTCTTTTATT  1047
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTGGAGTTCTGTTGAATGGAAGCTTGGTACCTGCAAGTACTTCACCTGTCTTCCTTAATGGAAATTCTTTTATT  1110

Query 1048  CAGGGACCCAGTGGAGTTATCCTTAATGGATTAAATGTGGGAAATACACAGGCAGTGGCATTGAACCCACCAAA  1121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CAGGGACCCAGTGGAGTTATCCTTAATGGATTAAATGTGGGAAATACACAGGCAGTGGCATTGAACCCACCAAA  1184

Query 1122  AATGTCATCAAACATTGTGAGCAATGGTATATCCATGACTGACATACTGGGGTCTACTTCCCAGGACGTGAAGG  1195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AATGTCATCAAACATTGTGAGCAATGGTATATCCATGACTGACATACTGGGGTCTACTTCCCAGGACGTGAAGG  1258

Query 1196  AATTCAAAGTCCTCCAGAGTTCTGCTAACTCAGCAACCACCACGTCCTACAGCCCCAGTGTCCCTGTCTCATTC  1269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AATTCAAAGTCCTCCAGAGTTCTGCTAACTCAGCAACCACCACGTCCTACAGCCCCAGTGTCCCTGTCTCATTC  1332

Query 1270  CCAGGCCTGATACCCAGCACTGAGGTGAAAAGAGAAGGCATTCAAACAGTGGCTTCCCAAGATGGAGGGTCTGT  1343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCAGGCCTGATACCCAGCACTGAGGTGAAAAGAGAAGGCATTCAAACAGTGGCTTCCCAAGATGGAGGGTCTGT  1406

Query 1344  AGTGACTTTTACTACACCAGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCCAATTCCGGAGCAAACAGCC  1417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AGTGACTTTTACTACACCAGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCCAATTCCGGAGCAAACAGCC  1480

Query 1418  AGTTCCTTAATGGGAGCATTGGATTCTCTCCACTGCAGCTGCCCCCTGTGTCAGTGGCAGCTTCACAAGGTAAT  1491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AGTTCCTTAATGGGAGCATTGGATTCTCTCCACTGCAGCTGCCCCCTGTGTCAGTGGCAGCTTCACAAGGTAAT  1554

Query 1492  ATCTCAGTAAGCTCAAGCACTTCAGATGGAAGCACATTTACAAGTGAGTCTACCACAGTCCAGCAAGGAAAGGT  1565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  ATCTCAGTAAGCTCAAGCACTTCAGATGGAAGCACATTTACAAGTGAGTCTACCACAGTCCAGCAAGGAAAGGT  1628

Query 1566  TTTCTTGAGCTCTCTTGCTCCCAGTGCAGTGGTATACACGGTTCCTAATACAGGCCAGACTATAGGATCTGTGA  1639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TTTCTTGAGCTCTCTTGCTCCCAGTGCAGTGGTATACACGGTTCCTAATACAGGCCAGACTATAGGATCTGTGA  1702

Query 1640  AACAGGAAGGCTTGGAAAGGAGCCTGGTATTTTCTCAGTTGATGCCTGTCAATCAGAATGCACAAGTAAATGCA  1713
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AACAGGAAGGCTTGGAAAGGAGCCTGGTATTTTCTCAGTTGATGCCTGTCAATCAGAATGCACAAGTAAATGCA  1776

Query 1714  AACCTGTCTTCTGAAAACATCTCGGGGAGTGGCCTGCATCCACTGGCCTCCTCATTAGTTAATGTATCTCCAAC  1787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AACCTGTCTTCTGAAAACATCTCGGGGAGTGGCCTGCATCCACTGGCCTCCTCATTAGTTAATGTATCTCCAAC  1850

Query 1788  TCACAATTTTTCTCTCAGTCCCTCTACACTACTAAATCCCACTGAGCTAAACCGCGACATTGCCGATAGCCAAC  1861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TCACAATTTTTCTCTCAGTCCCTCTACACTACTAAATCCCACTGAGCTAAACCGCGACATTGCCGATAGCCAAC  1924

Query 1862  CAATGTCTGCACCGGTGGCAAGCAAATCTACTGTGACATCTGTCAGCAACACTAACTATGCAACTCTTCAGAAC  1935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CAATGTCTGCACCGGTGGCAAGCAAATCTACTGTGACATCTGTCAGCAACACTAACTATGCAACTCTTCAGAAC  1998

Query 1936  TGCTCCCTTATTACTGGTCAAGACCTATTGTCAGTCCCTATGACTCAGGCTGCCCTTGGGGAAATAGTTCCTAC  2009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TGCTCCCTTATTACTGGTCAAGACCTATTGTCAGTCCCTATGACTCAGGCTGCCCTTGGGGAAATAGTTCCTAC  2072

Query 2010  AGCTGAAGATCAGGTAGGTCACCCCTCCCCAGCAGTACATCAGGATTTTGTCCAAGAACATCGTTTGGTTCTGC  2083
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AGCTGAAGATCAGGTAGGTCACCCCTCCCCAGCAGTACATCAGGATTTTGTCCAAGAACATCGTTTGGTTCTGC  2146

Query 2084  AATCGGTAGCTAACATGAAAGAGAATTTCTTATCAAATTCTGAGAGCAAAGCAACAAGTAGCTTAATGATGCTG  2157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AATCGGTAGCTAACATGAAAGAGAATTTCTTATCAAATTCTGAGAGCAAAGCAACAAGTAGCTTAATGATGCTG  2220

Query 2158  GACTCTAAATCCAAGTATGTCTTAGATGGCATGGTTGATACTGTCTGTGAAGACCTGGAAACAGACAAAAAAGA  2231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GACTCTAAATCCAAGTATGTCTTAGATGGCATGGTTGATACTGTCTGTGAAGACCTGGAAACAGACAAAAAAGA  2294

Query 2232  GCTTGCCAAGCTCCAGACTGTCCAGCTGGATGAAGATATGCAAGACTTA  2280
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GCTTGCCAAGCTCCAGACTGTCCAGCTGGATGAAGATATGCAAGACTTA  2343

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