Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15308
Subject:
NR_144521.1
Aligned Length:
1876
Identities:
938
Gaps:
933

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGGCTCCGAAGTCGCTGGGTACACGGCGCCTCCTCCGAGCGACACGCGCGGGAGCTGGGGCTGGGGCTGTTCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCTGCTCGAAGCTTCGTCACCGTCGCCCTGTGGGTGCAGTGCAGCATTGTACTGCAAGTCAATCGATACAATA  148

Query    1  ---------------------ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGT  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATTTAAGTCACTTCAGCTATAATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGT  222

Query   54  ATTCAAATGCAGAAACAAAACCTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTG  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATTCAAATGCAGAAACAAAACCTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTG  296

Query  128  TTGTTAAGAAAATAGCACTAAGAGAAATACGTATGTTGAAGCAAATTAAAACAATNCCAAATCTTGTGAACCTC  201
            |||||||||||||||||||||||||||||||||||||||||| ||||||||||  .||||||||||||||||||
Sbjct  297  TTGTTAAGAAAATAGCACTAAGAGAAATACGTATGTTGAAGC-AATTAAAACA--TCCAAATCTTGTGAACCTC  367

Query  202  ATCGAAGGTGTTCAGGAGAAAAAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAG  275
            |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  368  ATCG-AGGTGTTCAGGAG-AAAAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAG  439

Query  276  CTGGAAAGAAACCCAAATGGAGTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAA  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  440  CTGGAAAGAAACCCAAATGGAGTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAA  513

Query  350  TTTCTGTCATATACATAACTGTATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAA  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  514  TTTCTGTCATATACATAACTGTATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAA  587

Query  424  TCAAGATTTGTGACTTCGGGTTTGCACAAATTCTGA--------------------------------------  459
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct  588  TCAAGATTTGTGACTTCGGGTTTGCACAAATTCTGAGTTGGACTTCATCTTTCTCTGGTGCCTCCTTGATTGGC  661

Query  460  -----------------------------------------------------------------------TTC  462
                                                                                   |||
Sbjct  662  TTAATAGTTGACCTTCTGAATTCTTTTTCTGCCAATTCAGAGATTTTTCTCCTGGCTTGGATCCATTGCTGTTC  735

Query  463  CAGGAGATGCCTACACCGATTATGTAGCTACGAGATGGTACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAG  536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  736  CAGGAGATGCCTACACCGATTATGTAGCTACGAGATGGTACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAG  809

Query  537  TATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAGCTCCTGACAGGCCAGCCACTGTGGCC  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  810  TATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAGCTCCTGACAGGCCAGCCACTGTGGCC  883

Query  611  TGGAAAATCAGATGTGGACCAACTTTATCTGATAATCAGAACACTAGGAAAATTAATCCCAAGACATCAATCAA  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  884  TGGAAAATCAGATGTGGACCAACTTTATCTGATAATCAGAACACTAGGAAAATTAATCCCAAGACATCAATCAA  957

Query  685  TCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATACCTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAG  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  958  TCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATACCTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAG  1031

Query  759  TTCTCAGATGTTCATCCTGTGGCTTCTGAACTTCATGAANGGNTGTCTGAAGATGAATCCAGATGACAGATTAA  832
            ||||||||||||||||||||||| |||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 1032  TTCTCAGATGTTCATCCTGTGGC-TCTGAACTTCATGAAGGGGTGTCTGAAGATGAATCCAGATGACAGATTAA  1104

Query  833  CCTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTTTTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAAT  906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105  CCTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTTTTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAAT  1178

Query  907  GAAGGAAGAAACAGAAGACGCCAACAGGT---------------------------------ACTTCCGC----  943
            |||||||||||||||||||||||||||.|                                 ||.|||||    
Sbjct 1179  GAAGGAAGAAACAGAAGACGCCAACAGATGGAGTTTCAATGGCGCTATCTCAGCTCACTGCAACCTCCGCCTCC  1252

Query  944  -----TCAAAAGT-------------------------------------------------------------  951
                 ||  ||||                                                             
Sbjct 1253  TGGGTTC--AAGTGATTCTCCTGCCTCAGCCTACTAAGTAGCTGAGATTACAGATATGAGCCACCACACCCAGC  1324

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1325  TAATTTTGTATTTTTAATATAGATGGGGTTTCACCATGTTGACCAGGCTGGTCTTGAACTCCTGACCTTGGGTG  1398

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1399  ATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATAAGCCACCGCGCCTGGCCTGGCTCAGTCAAC  1472

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1473  TTTTAATTTACCCCAAAATTTGCTTAAGCTGAGAATTGGTAATCCTACTCAACAGGCATATAAATGATTTGTAT  1546

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1547  TTTTAAAGTTAAAATTTTTCTTTCTGTTATGAACACTACTCATTGACCATATGTCTAAATATTGTCATATTGAA  1620

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1621  GATTCTGTGTGTCCATTTATTATTTTAGCACATATTTGTGTAGAAGCAGGTATATTTCAAATCACTTGAAGTCG  1694

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1695  TAGCTATATGTTAGTTAACATTGATAATTAGCCTAATCGTAATTTAAACTACTAGAAACAATTCACTAAAAGCA  1768

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct 1769  ATTTTAGTTTTATTATGTTAAATATACATAATATTATGGTTTTTAAAAATTTAGCTTAAGATACTTTGAAAACC  1842

Query  952  --------------------------  951
                                      
Sbjct 1843  CACATATGAGATTAAATATTTTGGTG  1868

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