Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15336
Subject:
NM_013490.4
Aligned Length:
1316
Identities:
817
Gaps:
368

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAAAACCAAGTTCTGCACCGGGGGCGAGGCCGAGCCGTCGCCTCTCGGGCTGCTGCTGAGCTGCGGTGGCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCTGCCCCGACGCCCGGCGTAGGGCAGCAGCGGGACGCCGCAGGCGAGCTGGAGTCCAAGCAGCTTGGTGGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAACCCAACCTCTCGCGCTGCCGCCGCCGCCGCCGCCGCCCCTGCCGCTGCCCCCGCCGCCATCACCGCCGCTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCGGACGAACAACCCGAGCCCCGGACCAGGCGCAGGGCCTACCTGTGGTGTAAGGAATTCCTGCCCGGAGCCTG  296

Query    1  ----------------------------------------------------------ATGCTGTTCCAGTGCT  16
                                                                      ||||||||||||||||
Sbjct  297  GCGAGGCCTTCGCGAGGACCAGTTCCACATCAGTGTCATCAGGGGTGGTCTCAGTAACATGCTGTTCCAGTGCT  370

Query   17  CCCTACCTGACACCACAGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGCGATTTTG  90
            ||||.||.|||.|||.|||||.|.||||.|||||||||||||||||||||.|||||||.|||||.||.||.||.
Sbjct  371  CCCTGCCAGACTCCATAGCCAGCGTTGGCGATGAGCCTCGGAAAGTGCTCTTGCGGCTCTATGGGGCAATCTTA  444

Query   91  CAGATGGGGGCTGAGGCCATGGTTCTGGAGAGCGTTATGTTTGCCATTCTCGCAGAGAGGTCACTTGGGCCAAA  164
            .||||||||||||||||.||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||
Sbjct  445  AAGATGGGGGCTGAGGCGATGGTTCTGGAGAGTGTTATGTTTGCCATTCTTGCAGAGAGGTCACTTGGGCCAAA  518

Query  165  ACTCTATGGCATCTTTCCCCAAGGCCGACTGGAGCAGTTCATCCCGAGCCGGCGATTAGATACTGAAGAATTAA  238
            |||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||.|||.
Sbjct  519  ACTCTTTGGCATCTTTCCCCAAGGCCGACTGGAGCAGTTTATCCCGAGCCGGCGATTGGACACTGAAGAGTTAC  592

Query  239  GTTTGCCAGATATTTCTGCAGAAATCGCCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTCAATAAG  312
            ||||.||||||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  593  GTTTACCAGATATTTCTGCAGAAATAGCTGAGAAAATGGCCACATTTCATGGTATGAAAATGCCATTCAATAAG  666

Query  313  GAACCAAAATGGCTTTTTGGCACAATGGAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTA-CTGAGGAAT  385
            ||||||||||||||||||||.|||||||||||.||.||.||..||||.||.|||.|.|||||.| |.| |||..
Sbjct  667  GAACCAAAATGGCTTTTTGGAACAATGGAAAAATACCTGAATCAAGTACTAAGACTCAAATTCAGCAG-GGAGG  739

Query  386  CCAGAATTAAAAAGCTCCACAAATTGCTCAGTTACAATCTGCC-CTTGGAACTGGAAAACCTGAGATCATTGCT  458
            |||||.||.|..|.||.|||||..|.|||..||||||.||||| ||| ||.||.||.||||||||.||||||||
Sbjct  740  CCAGAGTTCAGCAACTGCACAAGATCCTCTCTTACAACCTGCCTCTT-GAGCTCGAGAACCTGAGGTCATTGCT  812

Query  459  TGAATCTACTCCATCTCCAGTTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAAGGCC  532
            ..|.|.||||..||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||
Sbjct  813  GCAGTATACTAGATCTCCAGTTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTATTGTTGGAAGGCC  886

Query  533  GAGAGAATTCTGAAAAACAGAAACTGATGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATTCGAC  606
            ..|||||.|||||||..|.|||.||||||||.|||||.||.||.||||||||||||||||||||||||||.|||
Sbjct  887  AGGAGAACTCTGAAAGGCGGAAGCTGATGCTTATTGACTTTGAGTACAGCAGTTACAATTACAGGGGATTTGAC  960

Query  607  ATTGGAAATCACTTCTGTGAGTGGATGTATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAANNNNCCG  680
            |||||||||||.||||||||.||||||||||||||||.||||||.||.||.|||||.||||||||.|.....|.
Sbjct  961  ATTGGAAATCATTTCTGTGAATGGATGTATGATTATACCTATGAGAAGTATCCTTTCTTCAGAGCGAACATTCA  1034

Query  681  GAAGTATCCCACCAAGAAACAACAGCTCCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTTGAAA  754
            |||||||||..||...|||||||||||||||||||||||||||||||||.||.|||||||||||||.|||||||
Sbjct 1035  GAAGTATCCTTCCCGAAAACAACAGCTCCATTTTATTTCCAGTTACTTGACTACATTCCAAAATGATTTTGAAA  1108

Query  755  ACCTCAGTACTGAAGAAAAATCCATTATAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGCATCT  828
            .||||||||.||||||..|.|....||.|||||||||.||||||||||||||.||.||.|||||.|||||.|||
Sbjct 1109  GCCTCAGTAGTGAAGAGCAGTTTGCTACAAAAGAAGACATGTTGCTTGAAGTCAACAGATTTGCTCTTGCCTCT  1182

Query  829  CATTTCCTCTGGGGACTGTGGTCCATTGTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATGNNCNACGC  902
            |||||||||||||||||.||||||||||||||.||||||||.|||||.||||||||||||||||||....|.||
Sbjct 1183  CATTTCCTCTGGGGACTTTGGTCCATTGTACAGGCCAAGATCTCATCCATTGAATTTGGGTACATGGAATATGC  1256

Query  903  CCAAGCAAGGTTTGATGCCTATTTCCAGTTACTTG-CCNGNAGAGGAAGCTTGGGGTG  959
            ||||||.||.||.||.|||||.|         ||| ||.|.|||||||||||||||||
Sbjct 1257  CCAAGCCAGATTCGAGGCCTACT---------TTGACCAGAAGAGGAAGCTTGGGGTG  1305

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