Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15336
Subject:
NR_073190.1
Aligned Length:
2698
Identities:
817
Gaps:
1750

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGTGACGCTGGGCTCTCCGCGTGCAGCGCTGTAAAGGAGCGAGCGCCGCGGCCCCCTATAGCAGTCGCCTGCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCAGCCTCCCGCGCTCGTCTCTCGTTACTGCTGCCTGACGTCCATTGCTGCCTCTCCCCGCCGTCGCCGACGTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCTCCCCGCGCGCTCCCACAACCGCCGCCCGGCCGGTCAGTGAAGCCGGCGAGCCATTCCCCGCGCCGGCCCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGAGGCGGGCATCCAGCCGGACCCTGAGTGTGGCCCTCTCGTGCTGTGGCCGCCCGCGCCTTCTCGGCCGCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTCCAGCATGAAAACCAAGTTCTGCACCGGGGGCGAGGCCGAGCCGTCGCCTCTCGGGCTGCTGCTGAGCTGCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGGCAACGCTGCCCCGACGCCCGGCGTAGGGCAGCAGCGGGACGCCGCAGGCGAGCTGGAGTCCAAGCAGCTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGTGGCCGAACCCAACCTCTCGCGCTGCCGCCGCCGCCGCCGCCGCCCCTGCCGCTGCCCCCGCCGCCATCACC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCGCTAGCGGACGAACAACCCGAGCCCCGGACCAGGCGCAGGGCCTACCTGTGGTGTAAGGAATTCCTGCCCG  592

Query    1  -----------------------------------------------------------------ATGCTGTTC  9
                                                                             |||||||||
Sbjct  593  GAGCCTGGCGAGGCCTTCGCGAGGACCAGTTCCACATCAGTGTCATCAGGGGTGGTCTCAGTAACATGCTGTTC  666

Query   10  CAGTGCTCCCTACCTGACACCACAGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGC  83
            |||||||||||.||.|||.|||.|||||.|.||||.|||||||||||||||||||||.|||||||.|||||.||
Sbjct  667  CAGTGCTCCCTGCCAGACTCCATAGCCAGCGTTGGCGATGAGCCTCGGAAAGTGCTCTTGCGGCTCTATGGGGC  740

Query   84  GATTTTGCAGATG-------------------------------------------------------------  96
            .||.||..|||||                                                             
Sbjct  741  AATCTTAAAGATGGCTTGTCCATGCGATCGTGCCTGGAGCACTCTGGTTTCCAGGTGACAGACACGATTCACGA  814

Query   97  -----------------------------------------------------GGGGCTGAGGCCATGGTTCTG  117
                                                                 |||||||||||.|||||||||
Sbjct  815  GGTCCTGTAATAAAGAGGGATCCGAACAAGCTCAGAATGAAAATGAATTTCAAGGGGCTGAGGCGATGGTTCTG  888

Query  118  GAGAGCGTTATGTTTGCCATTCTCGCAGAGAGGTCACTTGGGCCAAAACTCTATGGCATCTTTCCCCAAGGCCG  191
            |||||.|||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  889  GAGAGTGTTATGTTTGCCATTCTTGCAGAGAGGTCACTTGGGCCAAAACTCTTTGGCATCTTTCCCCAAGGCCG  962

Query  192  ACTGGAGCAGTTCATCCCGAGCCGGCGATTAGATACTGAAGAATTAAGTTTGCCAGATATTTCTGCAGAAATCG  265
            ||||||||||||.|||||||||||||||||.||.||||||||.|||.||||.||||||||||||||||||||.|
Sbjct  963  ACTGGAGCAGTTTATCCCGAGCCGGCGATTGGACACTGAAGAGTTACGTTTACCAGATATTTCTGCAGAAATAG  1036

Query  266  CCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTCAATAAGGAACCAAAATGGCTTTTTGGCACAATG  339
            |.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1037  CTGAGAAAATGGCCACATTTCATGGTATGAAAATGCCATTCAATAAGGAACCAAAATGGCTTTTTGGAACAATG  1110

Query  340  GAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTA-CTGAGGAATCCAGAATTAAAAAGCTCCACAAATTGC  412
            |||||.||.||.||..||||.||.|||.|.|||||.| |.| |||..|||||.||.|..|.||.|||||..|.|
Sbjct 1111  GAAAAATACCTGAATCAAGTACTAAGACTCAAATTCAGCAG-GGAGGCCAGAGTTCAGCAACTGCACAAGATCC  1183

Query  413  TCAGTTACAATCTGCC-CTTGGAACTGGAAAACCTGAGATCATTGCTTGAATCTACTCCATCTCCAGTTGTATT  485
            ||..||||||.||||| ||| ||.||.||.||||||||.||||||||..|.|.||||..|||||||||||||||
Sbjct 1184  TCTCTTACAACCTGCCTCTT-GAGCTCGAGAACCTGAGGTCATTGCTGCAGTATACTAGATCTCCAGTTGTATT  1256

Query  486  TTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAAGGCCGAGAGAATTCTGAAAAACAGAAACTGA  559
            |||||||||||||||||||||||||||||||||.|||.|||||||||..|||||.|||||||..|.|||.||||
Sbjct 1257  TTGTCATAATGACTGTCAAGAAGGTAATATCTTATTGTTGGAAGGCCAGGAGAACTCTGAAAGGCGGAAGCTGA  1330

Query  560  TGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATTCGACATTGGAAATCACTTCTGTGAGTGGATG  633
            ||||.|||||.||.||.||||||||||||||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct 1331  TGCTTATTGACTTTGAGTACAGCAGTTACAATTACAGGGGATTTGACATTGGAAATCATTTCTGTGAATGGATG  1404

Query  634  TATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAANNNNCCGGAAGTATCCCACCAAGAAACAACAGCT  707
            ||||||||||.||||||.||.||.|||||.||||||||.|.....|.|||||||||..||...|||||||||||
Sbjct 1405  TATGATTATACCTATGAGAAGTATCCTTTCTTCAGAGCGAACATTCAGAAGTATCCTTCCCGAAAACAACAGCT  1478

Query  708  CCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTTGAAAACCTCAGTACTGAAGAAAAATCCATTA  781
            ||||||||||||||||||||||.||.|||||||||||||.|||||||.||||||||.||||||..|.|....||
Sbjct 1479  CCATTTTATTTCCAGTTACTTGACTACATTCCAAAATGATTTTGAAAGCCTCAGTAGTGAAGAGCAGTTTGCTA  1552

Query  782  TAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGCATCTCATTTCCTCTGGGGACTGTGGTCCATT  855
            .|||||||||.||||||||||||||.||.||.|||||.|||||.||||||||||||||||||||.|||||||||
Sbjct 1553  CAAAAGAAGACATGTTGCTTGAAGTCAACAGATTTGCTCTTGCCTCTCATTTCCTCTGGGGACTTTGGTCCATT  1626

Query  856  GTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATGNNCNACGCCCAAGCAAGGTTTGATGCCTATTTCCA  929
            |||||.||||||||.|||||.||||||||||||||||||....|.||||||||.||.||.||.|||||.|    
Sbjct 1627  GTACAGGCCAAGATCTCATCCATTGAATTTGGGTACATGGAATATGCCCAAGCCAGATTCGAGGCCTACT----  1696

Query  930  GTTACTTG-CCNGNAGAGGAAGCTTGGGGTG-------------------------------------------  959
                 ||| ||.|.|||||||||||||||||                                           
Sbjct 1697  -----TTGACCAGAAGAGGAAGCTTGGGGTGTGAATGGGGTGGCTCCATTCTTCACCACTGGACTGCGGGAGGC  1765

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1766  GGCTGCACCAGGCCCTCAGTGGAGCGCTGCTGTGACCACTGCCCTGGGCAGAAGGCCTGGATGTCTCACTACTG  1839

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1840  AGCACCGATGTGTATGATACTACAGACTATATTAAAGTGGAGTAACATTTCTTTCATCTTTGTTTACACTCTCA  1913

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1914  CTAGGACTCTGAACCATGATTGGAAGCAGAAATATAGTACGATAGTGCAATAGCTCAGAACCCGCCTAAACTGA  1987

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1988  AGGCCTTTTGGCTGCATGGCTACAGCTTTCAGCCACTTACGGCCCCAGCTGGACAGAGCAGTGCTGTGTGGGTA  2061

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2062  CTCCAAGTGCTGACTTAGGATATTAATGTGCTGCAACACATTTGTCACCAGGCTTTGAAGGTGACAGCCTGACA  2135

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2136  ATGTGTTGGAGACACTTCTGAAGGGCAAGTGAACAGACATACTGTGAAGTGGCTCAACAGGAGGAGCCTGAGTT  2209

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2210  GTGGGGTCTATGGATGGCAACCAGCTGATTCTGTACAGGGTACACTTGACTGTGGGTATGCAGGTGGCAGCTGC  2283

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2284  AGCCCTCCTGTGCTTGTGTACGCATGACTGCATGGACCAGCACCACTGCCTGGCCATAACTTCAGTGTCTCCTA  2357

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2358  ACTGGGTGTGCTTTATAGCTCCAGCTTCCTGGGAGGAGCAGTGGAGCCAGCTCCCTCACCCCTTCTTGCCTTCC  2431

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2432  CTCTGCCTGGCCTGGAACTCGGGCTTCTGCCCATTGCCCTCTGAAGCTGCTTCCCATCTGATGTCACTGGGAGA  2505

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2506  CAGCAGCTGTCTGTGGGGTATTGGGGTGCAGGTAGATTAGAGCTGTGAAATCCATGTACATTAATACCCAATGG  2579

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2580  GATAAACTTAGATTTTTTTTTTACTCTGAACTCTGAATTGTTTGTGCACATATTTCTGCTACCACCAAGACTGT  2653

Query  960  ----------------------------------  959
                                              
Sbjct 2654  ATTATACAGATAAATAAACAACTTGAAACCTGTT  2687

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