Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15336
Subject:
XR_428904.3
Aligned Length:
1993
Identities:
942
Gaps:
1042

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGAGGAGCGAGTGCAGCGGCCAGCAGCACATCCCCGCTCCACAGTCGCCGCAGTCGCCGCAGCCGCCGCCGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCCCGCGCGCCCAACCGCCGCGGCCCCCTGCCCCGCCGGCCTGCCAGTGAGAGAGCGGCGAGGGGGCGCCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGGACTCTGAGCCTAGTCCTCTCGCGCTGCGGCCGCCCGCGCCTCCTCGGCCGCCTGTCGGGCATGAAAACCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATTCTGCACCGGGGGCGAGGCGGAGCCCTCGCCGCTCGGGCTGCTGCTGAGCTGCGGTAGCGGCAGCGCGGCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCGGCGCCCGGCGTGGGGCAGCAGCGCGACGCCGCCAGCGACCTCGAGTCCAAGCAGCTGGGCGGCCAACAGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCGCTCGCGCTGCCCCCTCCGCCGCCGCTGCCGCTGCCGCTGCCGCTGCCCCAGCCCCCGCCGCCGCAGCCGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCGCAGACGAGCAGCCGGAGCCCCGGACGCGGCGCAGGGCCTATCTGTGGTGCAAGGAGTTCCTGCCCGGCGCC  518

Query    1  ------------------------------------------------------------ATGCTGTTCCAGTG  14
                                                                        ||||||||||||||
Sbjct  519  TGGCGGGGCCTCCGCGAGGACGAGTTCCACATCAGTGTCATCAGAGGCGGCCTTAGCAACATGCTGTTCCAGTG  592

Query   15  CTCCCTACCTGACACCACAGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGCGATTT  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCCCTACCTGACACCACAGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGCGATTT  666

Query   89  TGCAGATG------------------------------------------------------GGGGCTGAGGCC  108
            ||||||||                                                      ||||||||||||
Sbjct  667  TGCAGATGAGGTCCTGTAATAAAGAGGGATCCGAACAAGCTCAGAAAGAAAATGAATTTCAAGGGGCTGAGGCC  740

Query  109  ATGGTTCTGGAGAGCGTTATGTTTGCCATTCTCGCAGAGAGGTCACTTGGGCCAAAACTCTATGGCATCTTTCC  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATGGTTCTGGAGAGCGTTATGTTTGCCATTCTCGCAGAGAGGTCACTTGGGCCAAAACTCTATGGCATCTTTCC  814

Query  183  CCAAGGCCGACTGGAGCAGTTCATCCCGAGCCGGCGATTAGATACTGAAGAATTAAGTTTGCCAGATATTTCTG  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCAAGGCCGACTGGAGCAGTTCATCCCGAGCCGGCGATTAGATACTGAAGAATTAAGTTTGCCAGATATTTCTG  888

Query  257  CAGAAATCGCCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTCAATAAGGAACCAAAATGGCTTTTT  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CAGAAATCGCCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTCAATAAGGAACCAAAATGGCTTTTT  962

Query  331  GGCACAATGGAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTACTGAGGAATCCAGAATTAAAAAGCTCCA  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCACAATGGAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTACTGAGGAATCCAGAATTAAAAAGCTCCA  1036

Query  405  CAAATTGCTCAGTTACAATCTGCCCTTGGAACTGGAAAACCTGAGATCATTGCTTGAATCTACTCCATCTCCAG  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CAAATTGCTCAGTTACAATCTGCCCTTGGAACTGGAAAACCTGAGATCATTGCTTGAATCTACTCCATCTCCAG  1110

Query  479  TTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAAGGCCGAGAGAATTCTGAAAAACAG  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAAGGCCGAGAGAATTCTGAAAAACAG  1184

Query  553  AAACTGATGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATTCGACATTGGAAATCACTTCTGTGA  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AAACTGATGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATTCGACATTGGAAATCACTTCTGTGA  1258

Query  627  GTGGATGTATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAANNNNCCGGAAGTATCCCACCAAGAAAC  700
            |||||||||||||||||||||||||||||||||||||||||||||||....|||||||||||||||||||||||
Sbjct 1259  GTGGATGTATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAAACATCCGGAAGTATCCCACCAAGAAAC  1332

Query  701  AACAGCTCCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTTGAAAACCTCAGTACTGAAGAAAAA  774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AACAGCTCCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTTGAAAACCTCAGTACTGAAGAAAAA  1406

Query  775  TCCATTATAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGCATCTCATTTCCTCTGGGGACTGTG  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCCATTATAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGCATCTCATTTCCTCTGGGGACTGTG  1480

Query  849  GTCCATTGTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATG----------------------------  894
            ||||||||||||||||||||||||||||||||||||||||||||||                            
Sbjct 1481  GTCCATTGTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATGTACCCGAATGTGGTGACCTGGTGGCATC  1554

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1555  AGGACAGTGTGGCTCAGCCCAGGAAGCCGGGGGAGAAGCCGCTGTCACTGATGCTGTGGTTGCCTTTGGAGGTT  1628

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1629  GCCCTCACTTCCAGGCCAGCTGACCTTGCCTCCCCTGCTTCAGAGAAGTGCCTGCAATCCTGATGGGGAATGTA  1702

Query  895  -------------------------------------------------------NNCNACGCCCAAGCAAGGT  913
                                                                   ..|.|||||||||||||||
Sbjct 1703  GGCATCTGCACCCTCGAAGTCCAGCTCTGACCTCAGTCCCTTCTGACACGGGACAGACTACGCCCAAGCAAGGT  1776

Query  914  TTGATGCCTATTTCCAGTTACTTGCCNGNAGAGGAAGCTTGGGGTG----------------------------  959
            ||||||||||||||||        ||.|.|||||||||||||||||                            
Sbjct 1777  TTGATGCCTATTTCCA--------CCAGAAGAGGAAGCTTGGGGTGTGACTGTGGGGAGGACTCCATCCACCTC  1842

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1843  ATCACTGGACTGCATGGGGAGGCAGCAGAGCGGGGTCCCCTCTGTGCTTCGACTACTGCTCCTGTGGCAGGAGG  1916

Query  960  ---------------------------------------------------------------------  959
                                                                                 
Sbjct 1917  CTTTGGGTGGCTCACTACTGAACACATGTGTATGATACTAAAGACGGTATTAAAATGGAGCGACGTTTA  1985

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