Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15336
Subject:
XR_949772.2
Aligned Length:
2882
Identities:
942
Gaps:
1931

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCCAGCAGCACATCCCCGCTCCACAGTCGCCGCAGTCGCCGCAGCCGCCGCCGCCGCCCCGCGCGCCCAACCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGCGGCCCCCTGCCCCGCCGGCCTGCCAGTGAGAGAGCGGCGAGGGGGCGCCCGGCCGGACTCTGAGCCTAGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTCTCGCGCTGCGGCCGCCCGCGCCTCCTCGGCCGCCTGTCGGGCATGAAAACCAAATTCTGCACCGGGGGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGCGGAGCCCTCGCCGCTCGGGCTGCTGCTGAGCTGCGGTAGCGGCAGCGCGGCCCCGGCGCCCGGCGTGGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGCAGCGCGACGCCGCCAGCGACCTCGAGTCCAAGCAGCTGGGCGGCCAACAGCCGCCGCTCGCGCTGCCCCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCGCCGCCGCTGCCGCTGCCGCTGCCGCTGCCCCAGCCCCCGCCGCCGCAGCCGCCCGCAGACGAGCAGCCGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGCCCCGGACGCGGCGCAGGGCCTATCTGTGGTGCAAGGAGTTCCTGCCCGGCGCCTGGCGGGGCCTCCGCGAG  518

Query    1  ------------------------------------------ATGCTGTTCCAGTGCTCCCTACCTGACACCAC  32
                                                      ||||||||||||||||||||||||||||||||
Sbjct  519  GACGAGTTCCACATCAGTGTCATCAGAGGCGGCCTTAGCAACATGCTGTTCCAGTGCTCCCTACCTGACACCAC  592

Query   33  AGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGCGATTTTGCAGATGGGGGCTGAGG  106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGCGATTTTGCAGATGGGGGCTGAGG  666

Query  107  CCATGGTTCTGGAGAGCGTTATGTTTGCCATTCTCGCAGAGAGGTCACTTGGGCCAAAACTCTATGGCATCTTT  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCATGGTTCTGGAGAGCGTTATGTTTGCCATTCTCGCAGAGAGGTCACTTGGGCCAAAACTCTATGGCATCTTT  740

Query  181  CCCCAAGGCCGACTGGAGCAGTTCATCCCGAGCCGGCGATTAGATACTGAAGAATTAAGTTTGCCAGATATTTC  254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCCAAGGCCGACTGGAGCAGTTCATCCCGAGCCGGCGATTAGATACTGAAGAATTAAGTTTGCCAGATATTTC  814

Query  255  TGCAGAAATCGCCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTCAATAAGGAACCAAAATGGCTTT  328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGCAGAAATCGCCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTCAATAAGGAACCAAAATGGCTTT  888

Query  329  TTGGCACAATGGAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTACTGAGGAATCCAGAATTAAAAAGCTC  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTGGCACAATGGAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTACTGAGGAATCCAGAATTAAAAAGCTC  962

Query  403  CACAAATTGCTCAGTTACAATCTGCCCTTGGAACTGGAAAACCTGAGATCATTGCTTGAATCTACTCCATCTCC  476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CACAAATTGCTCAGTTACAATCTGCCCTTGGAACTGGAAAACCTGAGATCATTGCTTGAATCTACTCCATCTCC  1036

Query  477  AGTTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAAGGCCGAGAGAATTCTGAAAAAC  550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGTTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAAGGCCGAGAGAATTCTGAAAAAC  1110

Query  551  AGAAACTGATGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATTCGACATTGGAAATCACTTCTGT  624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGAAACTGATGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATTCGACATTGGAAATCACTTCTGT  1184

Query  625  GAGTGGATGTATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAANNNNCCGGAAGTATCCCACCAAGAA  698
            |||||||||||||||||||||||||||||||||||||||||||||||||....|||||||||||||||||||||
Sbjct 1185  GAGTGGATGTATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAAACATCCGGAAGTATCCCACCAAGAA  1258

Query  699  ACAACAGCTCCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTTGAAAACCTCAGTACTGAAGAAA  772
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ACAACAGCTCCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTTGAAAACCTCAGTACTGAAGAAA  1332

Query  773  AATCCATTATAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGCATCTCATTTCCTCTGGGGACTG  846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AATCCATTATAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGCATCTCATTTCCTCTGGGGACTG  1406

Query  847  TGGTCCATTGTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATG--------------------------  894
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct 1407  TGGTCCATTGTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATGTACCCGAATGTGGTGACCTGGTGGCA  1480

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1481  TCAGGACAGTGTGGCTCAGCCCAGGAAGCCGGGGGAGAAGCCGCTGTCACTGATGCTGTGGTTGCCTTTGGAGG  1554

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1555  TTGCCCTCACTTCCAGGCCAGCTGACCTTGCCTCCCCTGCTTCAGAGAAGTGCCTGCAATCCTGATGGGGAATG  1628

Query  895  ---------------------------------------------------------NNCNACGCCCAAGCAAG  911
                                                                     ..|.|||||||||||||
Sbjct 1629  TAGGCATCTGCACCCTCGAAGTCCAGCTCTGACCTCAGTCCCTTCTGACACGGGACAGACTACGCCCAAGCAAG  1702

Query  912  GTTTGATGCCTATTTCCAGTTACTTGCCNGNAGAGGAAGCTTGGGGTG--------------------------  959
            ||||||||||||||||||        ||.|.|||||||||||||||||                          
Sbjct 1703  GTTTGATGCCTATTTCCA--------CCAGAAGAGGAAGCTTGGGGTGTGACTGTGGGGAGGACTCCATCCACC  1768

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1769  TCATCACTGGACTGCATGGGGAGGCAGCAGAGCGGGGTCCCCTCTGTGCTTCGACTACTGCTCCTGTGGCAGGA  1842

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1843  GGCTTTGGGTGGCTCACTACTGAACACATGTGTATGATACTAAAGACGGTATTAAAATGGAGCGACGTTTATTT  1916

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1917  CATCTCTTGTTTACGATTTCACTAGGACTCAGAAACGAGATCGGGAAGCAGAAATATAGTGCAATAGTGCAACA  1990

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1991  TCTCTGAATCCTTTTAATCTAGAGAAGGCATTTCATATTTGGGGGCTAAGGTTTCCAGTCAGATGAGGCAAACA  2064

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2065  GCAAGAGTAAGCAGTGTTACTTGCAGGTACTTTGGTTAATGTTGATTTAAATTTTCATGAATGTGCTGGTGAAC  2138

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2139  ACTGTGACCAGGCTTTTGTAGATGGCGATGTGTTATAGACGGTGCTCACTCCCAAGGGACAGCAAGTGAGCAGA  2212

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2213  GATGTACTGCAAAGTCGCCAGTCACTGCTGCAAGGTGGCCTCTGCCTGGGGCCTCCAGAAGCTGCTCCTTTACC  2286

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2287  CTCTTGGTCCCATGGCTGAAGCTGGAGCAGCGGATTGCTCTGGAGCAGCCAAGGCCGCCAGCGTGTGGAGCAGA  2360

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2361  GCTCTCCCCTCCTGCTGGGCGTGTGTGACACTGATGAGTTTCACTGTACTGCATGTGACTTCTCCCCTGCCCTT  2434

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2435  CCTCCTGATGGAGTGTGCAGACAGCCATGCGTGGCCACGGGGGCAGTGTGAGGACCTCCCTGTCTCCCGGCTCC  2508

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2509  CCTCCCAGGGGAGCCAGCTGCTTGACCTAGCTCTTTGGGCCTCTCCTGCCCTCTGCTCTGCCTGGAGTGTCGGA  2582

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2583  TCCTGTGAGTAGGCTGGGCCTCCCCTGGGCAGGGTTCTCCAAGGGCCCGGTTTCCCGGCCCTTACCTTTCCTGA  2656

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2657  TGCCCCTGACATCATCATTCTTGTGGGAGACAGCAGCCTGTATGTGGTGTGGGGCGTGGATCGAGTGTAGCTGT  2730

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2731  GAAATCCATATATATGAAATGTCCTGCGGGATACAGTCTTAGCTGACTTTTTTTTACTCTGAACTCTTATTTGA  2804

Query  960  ----------------------------------------------------------------------  959
                                                                                  
Sbjct 2805  ATTGTTTTTTGTGCATATATTTCTGCTACCACAGAGATTGTACTATACAAATAAAAAAATAAAAACCCAA  2874

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