Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15336
Subject:
XR_949773.2
Aligned Length:
2904
Identities:
863
Gaps:
2017

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGAGGAGCGAGTGCAGCGGCCAGCAGCACATCCCCGCTCCACAGTCGCCGCAGTCGCCGCAGCCGCCGCCGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCCCGCGCGCCCAACCGCCGCGGCCCCCTGCCCCGCCGGCCTGCCAGTGAGAGAGCGGCGAGGGGGCGCCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGGACTCTGAGCCTAGTCCTCTCGCGCTGCGGCCGCCCGCGCCTCCTCGGCCGCCTGTCGGGCATGAAAACCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATTCTGCACCGGGGGCGAGGCGGAGCCCTCGCCGCTCGGGCTGCTGCTGAGCTGCGGTAGCGGCAGCGCGGCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCGGCGCCCGGCGTGGGGCAGCAGCGCGACGCCGCCAGCGACCTCGAGTCCAAGCAGCTGGGCGGCCAACAGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCGCTCGCGCTGCCCCCTCCGCCGCCGCTGCCGCTGCCGCTGCCGCTGCCCCAGCCCCCGCCGCCGCAGCCGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCGCAGACGAGCAGCCGGAGCCCCGGACGCGGCGCAGGGCCTATCTGTGGTGCAAGGAGTTCCTGCCCGGCGCC  518

Query    1  ------------------------------------------------------------ATGCTGTTCCAGTG  14
                                                                        ||||||||||||||
Sbjct  519  TGGCGGGGCCTCCGCGAGGACGAGTTCCACATCAGTGTCATCAGAGGCGGCCTTAGCAACATGCTGTTCCAGTG  592

Query   15  CTCCCTACCTGACACCACAGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGCGATTT  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCCCTACCTGACACCACAGCCACCCTTGGTGATGAGCCTCGGAAAGTGCTCCTGCGGCTGTATGGAGCGATTT  666

Query   89  TGCAGATGGGGGCTGAGGCCATGGTTCTGGAGAGCGTTATGTTTGC----CATTCTCGCAGAGAGGTCACTTGG  158
            ||||||       |||||.|.| ||..|..||||.|.|       |    ||..||  ||||.||         
Sbjct  667  TGCAGA-------TGAGGTCCT-GTAATAAAGAGGGAT-------CCGAACAAGCT--CAGAAAG---------  714

Query  159  GCCAAAACTCTATGGCATCTTTCCCCAAGGCCGACTGGAGCAGTTCATCCCGAGCCGGCGATTAGATACTGAAG  232
               ||||                               .|.|.||||    .||||||||||||||||||||||
Sbjct  715  ---AAAA-------------------------------TGAATTTCA----AAGCCGGCGATTAGATACTGAAG  750

Query  233  AATTAAGTTTGCCAGATATTTCTGCAGAAATCGCCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTC  306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  751  AATTAAGTTTGCCAGATATTTCTGCAGAAATCGCCGAGAAAATGGCTACATTTCATGGTATGAAAATGCCATTC  824

Query  307  AATAAGGAACCAAAATGGCTTTTTGGCACAATGGAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTACTGA  380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  825  AATAAGGAACCAAAATGGCTTTTTGGCACAATGGAAAAGTATCTAAAGGAAGTGCTGAGAATTAAATTTACTGA  898

Query  381  GGAATCCAGAATTAAAAAGCTCCACAAATTGCTCAGTTACAATCTGCCCTTGGAACTGGAAAACCTGAGATCAT  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  899  GGAATCCAGAATTAAAAAGCTCCACAAATTGCTCAGTTACAATCTGCCCTTGGAACTGGAAAACCTGAGATCAT  972

Query  455  TGCTTGAATCTACTCCATCTCCAGTTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAA  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  973  TGCTTGAATCTACTCCATCTCCAGTTGTATTTTGTCATAATGACTGTCAAGAAGGTAATATCTTGTTGCTGGAA  1046

Query  529  GGCCGAGAGAATTCTGAAAAACAGAAACTGATGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATT  602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047  GGCCGAGAGAATTCTGAAAAACAGAAACTGATGCTCATTGATTTCGAATACAGCAGTTACAATTACAGGGGATT  1120

Query  603  CGACATTGGAAATCACTTCTGTGAGTGGATGTATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAANNN  676
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||...
Sbjct 1121  CGACATTGGAAATCACTTCTGTGAGTGGATGTATGATTATAGCTATGAAAAATACCCTTTTTTCAGAGCAAACA  1194

Query  677  NCCGGAAGTATCCCACCAAGAAACAACAGCTCCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTT  750
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195  TCCGGAAGTATCCCACCAAGAAACAACAGCTCCATTTTATTTCCAGTTACTTGCCTGCATTCCAAAATGACTTT  1268

Query  751  GAAAACCTCAGTACTGAAGAAAAATCCATTATAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGC  824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269  GAAAACCTCAGTACTGAAGAAAAATCCATTATAAAAGAAGAAATGTTGCTTGAAGTTAATAGGTTTGCCCTTGC  1342

Query  825  ATCTCATTTCCTCTGGGGACTGTGGTCCATTGTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATG----  894
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct 1343  ATCTCATTTCCTCTGGGGACTGTGGTCCATTGTACAAGCCAAGATTTCATCTATTGAATTTGGGTACATGTACC  1416

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1417  CGAATGTGGTGACCTGGTGGCATCAGGACAGTGTGGCTCAGCCCAGGAAGCCGGGGGAGAAGCCGCTGTCACTG  1490

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1491  ATGCTGTGGTTGCCTTTGGAGGTTGCCCTCACTTCCAGGCCAGCTGACCTTGCCTCCCCTGCTTCAGAGAAGTG  1564

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1565  CCTGCAATCCTGATGGGGAATGTAGGCATCTGCACCCTCGAAGTCCAGCTCTGACCTCAGTCCCTTCTGACACG  1638

Query  895  -----NNCNACGCCCAAGCAAGGTTTGATGCCTATTTCCAGTTACTTGCCNGNAGAGGAAGCTTGGGGTG----  959
                 ..|.|||||||||||||||||||||||||||||||        ||.|.|||||||||||||||||    
Sbjct 1639  GGACAGACTACGCCCAAGCAAGGTTTGATGCCTATTTCCA--------CCAGAAGAGGAAGCTTGGGGTGTGAC  1704

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1705  TGTGGGGAGGACTCCATCCACCTCATCACTGGACTGCATGGGGAGGCAGCAGAGCGGGGTCCCCTCTGTGCTTC  1778

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1779  GACTACTGCTCCTGTGGCAGGAGGCTTTGGGTGGCTCACTACTGAACACATGTGTATGATACTAAAGACGGTAT  1852

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1853  TAAAATGGAGCGACGTTTATTTCATCTCTTGTTTACGATTTCACTAGGACTCAGAAACGAGATCGGGAAGCAGA  1926

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 1927  AATATAGTGCAATAGTGCAACATCTCTGAATCCTTTTAATCTAGAGAAGGCATTTCATATTTGGGGGCTAAGGT  2000

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2001  TTCCAGTCAGATGAGGCAAACAGCAAGAGTAAGCAGTGTTACTTGCAGGTACTTTGGTTAATGTTGATTTAAAT  2074

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2075  TTTCATGAATGTGCTGGTGAACACTGTGACCAGGCTTTTGTAGATGGCGATGTGTTATAGACGGTGCTCACTCC  2148

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2149  CAAGGGACAGCAAGTGAGCAGAGATGTACTGCAAAGTCGCCAGTCACTGCTGCAAGGTGGCCTCTGCCTGGGGC  2222

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2223  CTCCAGAAGCTGCTCCTTTACCCTCTTGGTCCCATGGCTGAAGCTGGAGCAGCGGATTGCTCTGGAGCAGCCAA  2296

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2297  GGCCGCCAGCGTGTGGAGCAGAGCTCTCCCCTCCTGCTGGGCGTGTGTGACACTGATGAGTTTCACTGTACTGC  2370

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2371  ATGTGACTTCTCCCCTGCCCTTCCTCCTGATGGAGTGTGCAGACAGCCATGCGTGGCCACGGGGGCAGTGTGAG  2444

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2445  GACCTCCCTGTCTCCCGGCTCCCCTCCCAGGGGAGCCAGCTGCTTGACCTAGCTCTTTGGGCCTCTCCTGCCCT  2518

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2519  CTGCTCTGCCTGGAGTGTCGGATCCTGTGAGTAGGCTGGGCCTCCCCTGGGCAGGGTTCTCCAAGGGCCCGGTT  2592

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2593  TCCCGGCCCTTACCTTTCCTGATGCCCCTGACATCATCATTCTTGTGGGAGACAGCAGCCTGTATGTGGTGTGG  2666

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2667  GGCGTGGATCGAGTGTAGCTGTGAAATCCATATATATGAAATGTCCTGCGGGATACAGTCTTAGCTGACTTTTT  2740

Query  960  --------------------------------------------------------------------------  959
                                                                                      
Sbjct 2741  TTTACTCTGAACTCTTATTTGAATTGTTTTTTGTGCATATATTTCTGCTACCACAGAGATTGTACTATACAAAT  2814

Query  960  ------------------  959
                              
Sbjct 2815  AAAAAAATAAAAACCCAA  2832

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