Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15496
- Subject:
- XR_001740148.2
- Aligned Length:
- 2564
- Identities:
- 991
- Gaps:
- 1571
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTTTTCACTGCAGCTGAATGAGTTGTGGCGCCCACAATGCTCCCATGACAAGGAGCTGACAAGTTCCATTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGTCGCGGGCATCTTGGAATCATGACTCCCACAATGCCTTGGGCACTTGGTCGACAGTGGGGCCGCCTCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAAAAAATGTGAGAGGTTGGTACTAAGAAGTGCCTTTCCTGACGTCTCTGCTGCTTGGAACCGCTTCTAGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTCTCTGCTTTTGCCTTGCTTGCTGCCAGCTAGACTGTGACGACAGCACATCCACCCTCCACCTCTAGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACACCCCCATTTCTACTTATAATCAAGAGAAAAGCTCTAAGTATCTGGCATTGCCCTAGGCTGCTTTAGTGTTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAAGAAAAGTTTGCTGAAAAAGTAAGATATCTTCTGCCAGGAAATCAAGGAGGAAAAAAAAAATCATTTTCTCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTTGCTCTAAACTGCTGCATCTGTCTATGCCAAACTAATCAATACCGATTGCACCACCAAACTCCATTGCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATTCAGCTGTGAGGAGATTCCCTTTCAGACAACTTTGCTGAAAGCAGCTTGGAAATTCGGTGTCGAAGGGTCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCACGTTTTCATGCTTGCATTTTGGGCTCCAAATTGGCACTGGGAAGGGGTTACTGAGAGCACAAGGCTGATAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGGCCCTACTTTTAAACGTTCATCTACTTACAATCCTAGTATTTCTCTAAAAACCAAAACCTCTTTGAATTAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGTTTCATGCTGTGAATTTCTAGTGGGAGATCTTTTCCTTGATATTGACGACACAATTTTCCATGTACTTTTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGCAGGGAGTGGGGAAAAGTATTTTGAGGGGACATTTTCATCATCAGTTCAGCTTTTTTTTTTTGGTTGTTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTTTTTTGGGGGGGTTGGGTTTGTTGGTTTCACTGAAACATTTAACTACCTGTAAAATCTAAACATGGCTGTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGGAAGTATGTAGAGAGTTCCAGAGGGGGACTTGCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGGCCAGACACGGAATGTAAATTTGCACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGAGTAATCGCCT 1110
Query 1 --------------ATGGGCCGTTGCTCCAGGGAGAACTGCAAATATCTTCATCCACCCCCACATTTAAAAACG 60
|..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCTTTGATTCATTGAAAGGCCGTTGCTCCAGGGAGAACTGCAAATATCTTCATCCACCCCCACATTTAAAAACG 1184
Query 61 CAGTTGGAGATAAATGGACGCAATAACTTGATTCAGCAGAAGAACATGGCCATGTTGGCCCAGCAAATGCAACT 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAGTTGGAGATAAATGGACGCAATAACTTGATTCAGCAGAAGAACATGGCCATGTTGGCCCAGCAAATGCAACT 1258
Query 135 AGCCAATGCCATGATGCCTGGTGCCCCATTACAACCCGTGCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCA 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGCCAATGCCATGATGCCTGGTGCCCCATTACAACCCGTGCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCA 1332
Query 209 ATGCATCAGCAGCCGCCTTTAATCCCTATCTGGGACCTGTTTCTCCAAGCCTGGTCCCGGCAGAGATCTTGCCG 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATGCATCAGCAGCCGCCTTTAATCCCTATCTGGGACCTGTTTCTCCAAGCCTGGTCCCGGCAGAGATCTTGCCG 1406
Query 283 ACTGCACCAATGTTGGTTACAGGGAATCCGGGTGTCCCTGTACCTGCAGCTGCTGCAGCTGCTGCACAGAAATT 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACTGCACCAATGTTGGTTACAGGGAATCCGGGTGTCCCTGTACCTGCAGCTGCTGCAGCTGCTGCACAGAAATT 1480
Query 357 AATGCGAACAGACAGACTTGAGGTATGTCGAGAGTACCAACGTGGCAATTGCAACCGAGGAGAAAATGATTGTC 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AATGCGAACAGACAGACTTGAGGTATGTCGAGAGTACCAACGTGGCAATTGCAACCGAGGAGAAAATGATTGTC 1554
Query 431 GGTTTGCTCATCCTGCTGACAGCACAATGATTGACACCAATGACAACACAGTCACTGTGTGTATGGATTACATC 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGTTTGCTCATCCTGCTGACAGCACAATGATTGACACCAATGACAACACAGTCACTGTGTGTATGGATTACATC 1628
Query 505 AAAGGGAGATGCTCTCGGGAAAAGTGCAAATACTTTCATCCCCCTGCACATTTGCAAGCCAAGATCAAGGCTGC 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAAGGGAGATGCTCTCGGGAAAAGTGCAAATACTTTCATCCCCCTGCACATTTGCAAGCCAAGATCAAGGCTGC 1702
Query 579 CCAATACCAGGTCAACCAGGCTGCAGCTGCACAGGCTGCAGCCACCGCAGCTGCCATGACTCAGTCGGCTGTCA 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CCAATACCAGGTCAACCAGGCTGCAGCTGCACAGGCTGCAGCCACCGCAGCTGCCATGACTCAGTCGGCTGTCA 1776
Query 653 AATCACTGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCATTACCAAAG 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AATCACTGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCATTACCAAAG 1850
Query 727 AGGCCTGCTCTTGAAAAAACCAACGGTGCCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCT 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGGCCTGCTCTTGAAAAAACCAACGGTGCCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCT 1924
Query 801 AGCCAACATGCAGTTACAACAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTGCATGACACCCGCTACAA 874
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGCCAACATGCAGTTACAACAGCATACAGCATTTCTCCCACCA------------------------------- 1967
Query 875 GTGTTGTTCCCATGGTGCACGGTGCTACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACAAGTGTTCCC 948
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1968 -----GTTCCCATGGTGCACGGTGCTACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACAAGTGTTCCC 2036
Query 949 TTCGCTGCAACAGCCACAGCCAACCA------------------------------------------------ 974
||||||||||||||||||||||||||
Sbjct 2037 TTCGCTGCAACAGCCACAGCCAACCAGCCCCATCCTTGATGCTTCTACACTGTTGGGTGCAACATCCTGTCCTG 2110
Query 975 ----------------GATACCCATAATATCTGCCGAACATCTGACTAGCCACAAGTATGTTACCCAGATG--- 1029
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2111 CAGCAGCAGGAAAAATGATACCCATAATATCTGCCGAACATCTGACTAGCCACAAGTATGTTACCCAGATGTAG 2184
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2185 AATTTTCATCACTAAACAATCATGCTAAAGAGGAAAGGACAGTGTGCTTGGTTAGAGTAAAGGACGAGGTCATT 2258
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2259 AGCCATATTGTATATATCGTCAAGCAACACACACAAAAGTTCCTCAGCCACAAGACATCCACATATTGCATGTT 2332
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2333 AACCAGAAGAAAAGACAACATTTTCCGGAAATCCACTGCACACTGTTGCCTATACACTTTGTACATTTAATTGA 2406
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2407 TATTTGTGCTGAGGTGATATTCCTGTCTAAAAGAACAACATTGTCTTTCTTTTCTAGCACAGAGTTATGCATTC 2480
Query 1030 ------------------------------------------------ 1029
Sbjct 2481 AAAGATGCATACCTAGTTAGTTTCCTATATATTCATGCCATCTTGAAA 2528
