Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15515
Subject:
XM_006514586.3
Aligned Length:
3083
Identities:
1117
Gaps:
1828

Alignment

Query    1  ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTGAGGCCATTGACGGCTTCCCAGACTGTTAAGACATTTTCACA  74
            ||||||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||||||||
Sbjct    1  ATGTTTCATTTAAGGACTTGTGCTGCTAAGTTAAGGCCATTGACAGCCTCCCAGACTGTTAAGACATTTTCACA  74

Query   75  AAACAGACCAGCAGCAGCTAGGACATTTCAACAGATTCGGTGCTATTCTGCACCTGTTGCTGCTGAGCCCTTTC  148
            |||||.||||||||||..||||||.||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct   75  AAACAAACCAGCAGCAATTAGGACGTTTCAACAGATTCGGTGCTATTCTGCACCTGTAGCTGCTGAACCATTTC  148

Query  149  TCAGTGGGACTAGTTCGAACTATGTGGAGGAGATGTACTGTGCTTGGCTGGAAAACCCCAAAAGTGTACATAAG  222
            |.|||||||||||||||||||||||||||||.|||||||||||.|||.||||.||.||||||||||||||||||
Sbjct  149  TTAGTGGGACTAGTTCGAACTATGTGGAGGAAATGTACTGTGCCTGGTTGGAGAATCCCAAAAGTGTACATAAG  222

Query  223  TCATGGGACATTTTTTTTCGCAACACGAATGCCGGAGCCCCACCGGGCACTGCCTACCAGAGTCCCCTTCCCCT  296
            |||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.||||||.||||
Sbjct  223  TCATGGGACATTTTTTTCCGAAACACCAATGCTGGAGCCCCACCGGGCACTGCCTACCAGAGCCCCCTTTCCCT  296

Query  297  GAGCCGAGGCTCCCTGGCTGCTGTGGCCCATGCACAGTCCCTGGTAGAAGCACAGCCCAACGTGGACAAGCTCG  370
            |||.|||.|||||||||||.|..||||||||||||||||||||||.||||||||.||.|||||.|||||.||||
Sbjct  297  GAGTCGAAGCTCCCTGGCTACCATGGCCCATGCACAGTCCCTGGTGGAAGCACAACCTAACGTCGACAAACTCG  370

Query  371  TGGAGGACCACCTGGCAGTGCAGTCGCTCATCAGGGCATATCAGATACGAGGGCACCATGTAGCACAGCTGGAC  444
            |||||||||||.||||.||||||||.||||||||||||||||||.|..|.||.|||||..|.|||.|.||.||.
Sbjct  371  TGGAGGACCACTTGGCGGTGCAGTCTCTCATCAGGGCATATCAGGTCAGGGGTCACCACATTGCAAAACTTGAT  444

Query  445  CCCCTGGGGATT--TTG----GATGCTGATCTGGACTCCTCCGTGC-CCGCTGACATTATCTCATCCACAGACA  511
            ||.||.||.|||  |||    .||..||||   ||        ||| |||.|.||..|.|||         .||
Sbjct  445  CCTCTCGGAATTAGTTGTGTAAATTTTGAT---GA--------TGCTCCGGTAACTGTTTCT---------TCA  498

Query  512  AAC-TTGGGTTCTATGGCCTGGATGAGTCTGACCTCGACAAGGTCTTCCACTTGCCCACCACCACTTTCATCGG  584
            ||| |.||||||||||||||..|.|||||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct  499  AACGTGGGGTTCTATGGCCTACACGAGTCTGACCTTGACAAGGTCTTCCACTTACCCACCACCACTTTCATCGG  572

Query  585  GGGACAGGAATCAGCACTTCCTCTGCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCATATTGGGG  658
            |||||||||..|||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct  573  GGGACAGGAGCCAGCACTTCCTCTTCGGGAGATCATCCGTCGGCTGGAGATGGCCTACTGCCAGCACATTGGTG  646

Query  659  TGGAGTTCATGTTCATCAATGACCTGGAGCAGTGCCAGTGGATCCGGCAGAAGTTTGAGACCCCTGGGATCATG  732
            ||||||||||||||||.|||||..||||.||.||||||||||||||.||||||||||||||||||||.||||||
Sbjct  647  TGGAGTTCATGTTCATTAATGATTTGGAACAATGCCAGTGGATCCGACAGAAGTTTGAGACCCCTGGAATCATG  720

Query  733  CAGTTCACAAATGAGGAGAAACGGACCCTGCTGGCCAGGCTTGTGCGGTCCACCAGGTTTGAGGAGTTCCTACA  806
            ||||||||.|||||||||||.||||||.||||||||||||||||.||.||||||||||||||||||||||||||
Sbjct  721  CAGTTCACCAATGAGGAGAAGCGGACCTTGCTGGCCAGGCTTGTACGATCCACCAGGTTTGAGGAGTTCCTACA  794

Query  807  GCGGAAGTGGTCCTCTGAGAAGCGCTTTGGTCTAGAAGGCTGCGAGGTACTGATCCCTGCCCTCAAGACCATCA  880
            |||.|||||||||||.||||||||.||||||||.||||||||.|||||.||||||||||||||||||||.||||
Sbjct  795  GCGAAAGTGGTCCTCGGAGAAGCGTTTTGGTCTGGAAGGCTGTGAGGTGCTGATCCCTGCCCTCAAGACAATCA  868

Query  881  TTGACAAGTCTAGTGAGAATGGCGTGGACTACGTGATCATGGGCATGCCACACAGAGGGCGGCTGAACGTGCTT  954
            ||||.|.|||.||||..|||||.||||||||.|||||||||||.||||||||||||||.|||||||||||||||
Sbjct  869  TTGATATGTCAAGTGCAAATGGAGTGGACTATGTGATCATGGGGATGCCACACAGAGGACGGCTGAACGTGCTT  942

Query  955  GCAAATGTCATCAGGAAGGAGCTGGAACAGATCTTCTGTCAATTCGATTCAAAGCTGGAGGCAGCTGATGAGGG  1028
            ||||||||||||||||||||||||||.||.||.||||||||.||.||.||||||||||||||||||||||||||
Sbjct  943  GCAAATGTCATCAGGAAGGAGCTGGAGCAAATATTCTGTCAGTTTGACTCAAAGCTGGAGGCAGCTGATGAGGG  1016

Query 1029  CTCCGGAGATGTGAAGTACCACCTGGGCATGTATCACCGCAGGATCAATCGTGTCACCGACAGGAACATTACCT  1102
            .||.||.||..|||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||.||.|
Sbjct 1017  TTCTGGGGACATGAAGTACCACCTGGGCATGTATCACCGCAGGATCAACCGTGTGACCGACAGAAACATCACTT  1090

Query 1103  TGTCCTTGGTGGCCAACCCTTCCCACCTTGAGGCCGCTGACCCCGTGGTGATGGGCAAGACCAAAGCCGAACAG  1176
            |||||||||||||.|||||||||||.||.|||||.||||||||.||.||||||||.|||||||||||.||||||
Sbjct 1091  TGTCCTTGGTGGCTAACCCTTCCCATCTAGAGGCTGCTGACCCTGTCGTGATGGGAAAGACCAAAGCTGAACAG  1164

Query 1177  TTTTACTGTGGCGACACTGAAGGGAAAAAGGTAAGGCC----------CAGAGAGAGGC-----GTGCAAGGCA  1235
            ||.||||||||.||||||||||||||||||||.|.|.|          ||..|.||.||     .|||..|.||
Sbjct 1165  TTCTACTGTGGAGACACTGAAGGGAAAAAGGTGATGTCTATCCTGCTGCATGGGGATGCTGCTTTTGCTGGCCA  1238

Query 1236  G---ATCGTCA----AGGCC--CCATGTTCCAGCATGGAGTT-CCG--CT-CAC--------------------  1276
            |   ||||| |    ||.||  ||||.|  ||||   ||.|| |||  || |||                    
Sbjct 1239  GGGCATCGT-ATATGAGACCTTCCATCT--CAGC---GACTTGCCGTCCTACACAACCCATGGCACTGTTCATG  1306

Query 1277  -------CAACA--------------------------------------------------------------  1281
                   |||||                                                              
Sbjct 1307  TGGTTGTCAACAACCAGATTGGCTTCACCACAGACCCTCGGATGGCCCGCTCCTCTCCCTACCCCACTGATGTG  1380

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1381  GCCCGAGTGGTGAATGCCCCCATTTTCCATGTCAACTCAGATGACCCTGAAGCTGTCATGTATGTATGCAAGGT  1454

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1455  GGCAGCTGAGTGGAGAAACACCTTCCACAAGGATGTTGTAGTTGATCTGGTGTGTTATCGACGAAATGGCCACA  1528

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1529  ATGAGATGGACGAACCTATGTTTACACAGCCACTCATGTACAAGCAGATCCGCAAGCAGAAGCCTGTACTGCAG  1602

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1603  AAGTATGCAGAATTGCTAGTCTCCCAGGGTGTCGTCAATCAGCCTGAGTACGAGGAGGAAATCTCCAAGTATGA  1676

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1677  TAAGATCTGTGAGGAAGCATTTACCAGATCCAAAGATGAGAAGATCTTGCACATCAAGCACTGGCTGGATTCCC  1750

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1751  CCTGGCCTGGCTTTTTCACCCTGGATGGACAGCCCAGGAGCATGACCTGCCCCTCCACTGGCCTGGAGGAGGAT  1824

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1825  GTCTTGTTCCACATTGGAAAGGTGGCCAGCTCTGTACCTGTGGAGAACTTTACTATCCATGGAGGGCTGAGCCG  1898

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1899  GATCTTGAAGACCCGCAGAGAGCTTGTGACGAACCGGACTGTGGACTGGGCCCTGGCAGAGTACATGGCATTTG  1972

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 1973  GCTCACTGCTGAAGGAAGGCATCCATGTGCGGCTGAGTGGCCAGGATGTGGAGCGGGGCACCTTCAGCCATCGC  2046

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2047  CACCATGTGCTCCATGATCAGAATGTTGACAAAAGAACCTGCATCCCCATGAACCACCTTTGGCCAAATCAGGC  2120

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2121  CCCTTACACTGTATGCAACAGCTCGCTGTCTGAGTACGGTGTCCTGGGCTTTGAGCTGGGCTTTGCCATGGCTA  2194

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2195  GCCCTAATGCTCTGGTTCTCTGGGAGGCCCAGTTTGGTGACTTCAACAACATGGCACAGTGCATCATTGACCAG  2268

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2269  TTCATCTGCCCAGGACAGGCAAAGTGGGTGCGGCAGAATGGCATTGTGCTCCTGCTGCCTCATGGCATGGAAGG  2342

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2343  CATGGGTCCCGAGCATTCCTCTGCCCGCCCAGAGCGGTTTCTGCAGATGTGCAATGATGACCCAGATGTCCTGC  2416

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2417  CTGACCTGCAGGAAGAAAACTTTGACATCAATCAGCTCTATGACTGCAACTGGATTGTTGTCAACTGTTCCACC  2490

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2491  CCTGGCAACTTCTTCCATGTGCTGCGACGACAGATCTTGCTGCCCTTCCGGAAGCCGTTAATCGTCTTCACTCC  2564

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2565  CAAATCCCTCCTGCGCCACCCTGAGGCAAGAACTAGCTTTGACGAGATGCTGCCAGGAACGCACTTCCAGCGTG  2638

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2639  TGATCCCAGAAAATGGACCTGCAGCTCAGGACCCACACAAAGTCAAGAGACTTCTCTTCTGCACTGGGAAGGTG  2712

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2713  TACTATGACCTCACCCGAGAGCGCAAAGCCAGGAACATGGAGGAGGAGGTGGCTATTACAAGGATTGAGCAGCT  2786

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2787  ATCACCATTCCCCTTTGACCTCCTGCTGAAAGAGGCACAGAAGTATCCCAATGCTGAGCTGGCCTGGTGCCAGG  2860

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2861  AAGAGCACAAGAACCAAGGCTACTATGACTATGTCAAGCCAAGACTTCGTACCACCATTGACCGTGCTAAGCCT  2934

Query 1282  --------------------------------------------------------------------------  1281
                                                                                      
Sbjct 2935  GTCTGGTATGCTGGCCGAGACCCGGCAGCTGCTCCAGCCACTGGCAACAAGAAAACACACCTGACAGAGCTGCA  3008

Query 1282  -------------------------------------------------  1281
                                                             
Sbjct 3009  GCGCTTTCTGGACACAGCCTTTGACCTGGACGCATTCAAGAAATTCTCT  3057

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