Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15888
- Subject:
- XM_006519425.3
- Aligned Length:
- 5025
- Identities:
- 700
- Gaps:
- 4263
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACTGCATCAAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCCCACTAGCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGTATGGATCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCATCACTTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACCAAGGGCAGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTAAAATGCCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAGTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCTAAAACTGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCATGATCTCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGTCTCAGGAGGCTATCCAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GATTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGGTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GACTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTAGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CATGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAAGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTTAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATGTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGGATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAGCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCAAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGTACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACTTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTGTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGTGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GAGCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATCCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACCTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAAC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGG 4070
Query 1 ----------------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTC 52
|||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|
Sbjct 4071 AGGAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGC 4144
Query 53 AGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCA 111
||||.||||||||||.||||.||||||||||||||||.|||||||| |||||||||||||
Sbjct 4145 AGACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCA 4218
Query 112 AAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAG 185
||||||||||||||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||
Sbjct 4219 AAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAG 4292
Query 186 CAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGA 259
||||||.|||||.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.||||||||||
Sbjct 4293 CAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGA 4366
Query 260 CAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGAAGGCATGATGGGTGGCTATCCGCCAGGCCTT 333
|||||||||||||.|||||.||||||||||||||||||||||||
Sbjct 4367 CAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAA------------------------------ 4410
Query 334 CCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCC 407
Sbjct 4411 -------------------------------------------------------------------------- 4410
Query 408 ACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGG 481
|||||||||||.||||||||.|
Sbjct 4411 ----------------------------------------------------GGTGTGATGAATCAAGGAGTAG 4432
Query 482 CCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGG 555
||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||||||
Sbjct 4433 CCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGG 4506
Query 556 CAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCAT 629
|||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||.|||||
Sbjct 4507 CAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCAT 4580
Query 630 GTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCA 703
||||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 4581 GTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCA 4654
Query 704 GTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAA 777
||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|||||||||||.|||
Sbjct 4655 GTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAA 4728
Query 778 GAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTG 851
||||||||||||||||||||.|||||||||||.|||||.||||||||.||||||||||||||||||||||||||
Sbjct 4729 GAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTG 4802
Query 852 GCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT 918
||||||.||.|||||.|||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 4803 GCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT 4869
