Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16026
Subject:
XR_387784.1
Aligned Length:
3570
Identities:
414
Gaps:
3100

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA  222

Query    1  -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG  49
                                     |||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct  223  ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG  296

Query   50  TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT  123
            ||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct  297  TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT  370

Query  124  GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC  197
            ||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct  371  GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC  444

Query  198  TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT  271
            ..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct  445  ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT  518

Query  272  TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT  345
            ||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct  519  TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA  592

Query  346  CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC  419
            ||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  593  CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC  666

Query  420  CTTTGGAAGTTTTTTGGTAAGTAAACATAGTT-TAACT------------------------------------  456
            .||||||||||||||||       .|||.||| |.|||                                    
Sbjct  667  ATTTGGAAGTTTTTTGG-------GCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCT  733

Query  457  ----TGTCTATTACAAC--TTTT------GCTG-----------------------------------------  477
                ||.||.|||||.|  ||||      ||||                                         
Sbjct  734  TCGGTGCCTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAGATCGT  807

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  808  CCGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCA  881

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  882  TGATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTC  955

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  956  ATACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATCCCAA  1029

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1030  TGCTGAAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCT  1103

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1104  CAGATTCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCT  1177

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1178  GACAAGGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATA  1251

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1252  CAGGGGTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGA  1325

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1326  TATACCTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCC  1399

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1400  AAGGGTAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCT  1473

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1474  AACACGTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGC  1547

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1548  CATCCAGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAG  1621

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1622  TGGTTCTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCC  1695

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1696  GAGAAGCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAG  1769

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1770  TCCCAGCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCA  1843

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1844  GAGAAAGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCT  1917

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1918  TCTCCCTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAG  1991

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1992  TCAGCTGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTG  2065

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2066  TTACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAG  2139

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2140  ATTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAA  2213

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2214  AATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTC  2287

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2288  CAGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGG  2361

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2362  AAAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGT  2435

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2436  CTTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAG  2509

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2510  TGGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTAT  2583

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2584  GGTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTA  2657

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2658  GCACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTG  2731

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2732  GCAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGT  2805

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2806  GCTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTG  2879

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2880  TCTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTC  2953

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2954  TCTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTT  3027

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3028  TTGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTT  3101

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3102  TTACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCA  3175

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3176  TTAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTG  3249

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3250  TCCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACG  3323

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3324  GCTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAAT  3397

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3398  TCTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTC  3471

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3472  AAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAA  3545

Query  478  ------------------  477
                              
Sbjct 3546  CAGAGAGTACTTGACGAA  3563

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