Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16111
Subject:
NR_158606.1
Aligned Length:
2275
Identities:
253
Gaps:
2014

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTTTGGCCGGAAAGGCTTACCATGAGTTGCCAGGGCTGAGAGAGATGGAGAAGGATTCGCGGCGGTGACAGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAAATTCCCCAGTTACATTATAGACTTGGAGACTTGTCCTTGTGTGGACGGGAGCCGGAAAGCCTTGAGAACTT  148

Query    1  ----------------ATGGCACAGGAGAAAATGAAACTAGGTTTCAAGTCGCTGCCGAGTTCCACTACCGCAG  58
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATTCCTCGACCCGGACATGGCACAGGAGAAAATGAAACTAGGTTTCAAGTCGCTGCCGAGTTCCACTACCGCAG  222

Query   59  ACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGTTTTAATTCACAGGTGTTGCAA  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGTTTTAATTCACAGGTGTTGCAA  296

Query  133  GCTGACATGTTAAGAATTAGGACAAACAGAACAACATTTAGGAATCGACGCTCTCTGGAATT-CTGGCACTTCT  205
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || .||.|||  ||
Sbjct  297  GCTGACATGTTAAGAATTAGGACAAACAGAACAACATTTAGGAATCGACGCTCTCTG---TTGTTGCCAC--CT  365

Query  206  GCTCAAGCCGGATGTCACTGCGTCACTTCTCCATCCCCA-CCCCCTCCTCTTC----CAAA-------------  261
            .|||   ||   |.||| || ||      |||||   || ||.|||  ||.||    ||||             
Sbjct  366  CCTC---CC---TTTCA-TG-GT------TCCAT---CAGCCGCCT--TCATCAAATCAAACAGTCTCCCTCTG  420

Query  262  ---------GGAAGCAGGGGAAATGT-CT-----CATCT---------------TCC-----------------  288
                     ||||||.||   |.||| ||     |||||               |||                 
Sbjct  421  ATGCCGAGCGGAAGCTGG---ACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGC  491

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  492  CTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCAGCCACACCTGACTGGTTTTCGTATTTTTTTGGTGGA  565

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  566  GACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCAAGTGATCTGCCAGCCTCGGCCTCCC  639

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  640  GAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTG  713

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  714  ATCTCGGCTCGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTG  787

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  788  CCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCATCTCTGCCTGGCCGCCCATCGTCTGGGAGGTGAGGAGCCC  861

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  862  CTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAG  935

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  936  CGCCTCTTCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCCGCTGCCCCGTCTGGGATGTGAG  1009

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1010  GAGCGCCTCTGCCCGGCCGCGACCCCGTCTGGGAGGTGAGGAGCATCTCTGCCCGGCCGCCCCGTCTGAGAAGT  1083

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1084  GAGGAGACCCTCCGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCAGCAGCCGCCCCGTCTG  1157

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1158  AGAAGTGAGGAGCCCCTCCGCCCGGCAGCCACACCGTCTGGGAAGTGAGGAGCGTCTCTGCCCGGCAGCCACCC  1231

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1232  CGTCCGGGAGGGAGGTGGGGGTCAGCCCCCGCCAGGCCAGCCGCCCCATCCGGGAGGAAGAAGCCATGGATTTA  1305

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1306  ATAAATAGAGAAACAATGTCTGAATGGAAGCTACAAAGTGAGATACAGATAAGTCACTCTTGGGAAGAAGGCTT  1379

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1380  GAAACTGAATGACAATGGCTTACAGAAATCATCCTCTCTAAAGTGCATTGATTTAACTCCAGTATCCTCAATGG  1453

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1454  CTTCTTCCATCAAGAAGACTGGGAAGCAGTGTTTCTCTCCATCATTACAAACTTGTGTGAGTTGCACTGGTTCG  1527

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1528  CCTTCAAGTCCTATTCCCAGTCCTATGCAACAATACATCATAAGAAGTCAAAATCCTACCAACATTATTAGACC  1601

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1602  AAGTATCCTTGGACCATTAAAAAGAAAAGGTGAAATGGCATTTCAATATCAACCAAAAAAGATTTTCCAAGGCA  1675

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1676  CAACCAACATGCTTTCTTCTGATACTTCCCAACTGTCAGAAAATAATGTGTATCTACTTCCAGCTACTTTTGAT  1749

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1750  GGAAACGACAGCAATGCTGGATCTTCTGGTAATTCGTCAGCTGAAATCGGCACTGTCACAAACTCTCCTGTGTC  1823

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1824  ACCTTCTGATACTGGTTCTCATTTGTTCTAGTAGACAAACTTTCAACTAAATGATTCACCCATCCCAAGACTTT  1897

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1898  CTCACCAGTGGAGAAACACACACATCAAGCAAACCAAGTCAGAGCAATGAGAATTGTACTGTATAATTTAAACT  1971

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1972  ATCTCCTATTTATCTTTTTTCCTCAATTTCCTAAAATTCTATTTATCTACAGAACTTGCGTGTATAATTCTTGT  2045

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 2046  GTACATCCTTAAATTTAATGTAATAACATGTTAAAGATGTTTTCCAAATCAGAACCATGTTGAAGATACAAGCG  2119

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 2120  TAAATTGTTAGGCTGCTATTTTCTAGAAAATGCTGTACCTTGACTTTTTAAAATAATCTTATGAAACATAATTC  2193

Query  289  -------------------------------------------------------  288
                                                                   
Sbjct 2194  TGATAAAATATAATTGTTCAATTAACAAAGTAAAATGATGTTTGACAATTATGTA  2248

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