Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00980
Subject:
XM_006501787.3
Aligned Length:
1311
Identities:
822
Gaps:
444

Alignment

Query    1  ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGGAAGTATGTAGAGAGTTCCAGAGGGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GACTTGCTCACGGCCAGACACGGAATGTAAATTTGCACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TAATCGCCTGCTTTGATTCATTGAAAGGCCGTTGCTCCAGGGAGAACTGCAAATATCTTCATCCACCCCCACAT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TTAAAAACGCAGTTGGAGATAAATGGACGCAATAACTTGATTCAGCAGAAGAACATGGCCATGTTGGCCCAGCA  296
                                                                  |||||||||.||||||||||
Sbjct    1  ------------------------------------------------------ATGGCCATGCTGGCCCAGCA  20

Query  297  AATGCAACTAGCCAATGCCATGATGCCTGGTGCCCCATTACAACCCGT--------------------------  344
            ||||||..|||||||||||||||||||.||||||||.||.||.|||||                          
Sbjct   21  AATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGAACATAATGCAACAATCATTCCAAA  94

Query  345  --------------------------------------------------------------------------  344
                                                                                      
Sbjct   95  AAAGAGGGGGGGATTGCATTTCGAGGTGGGAGGGATCCCCATATTACACCGGCAGTGATACCATTTATCAATAC  168

Query  345  -----------GCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAATGCATCAGCAGCCGCCTTTAATCCCTA  407
                       |||||||||||||||||||||||||||||||||||.||||||||||   ||||||||.||.||
Sbjct  169  TGTACAGTCGAGCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCA---GCCTTTAACCCTTA  239

Query  408  TCTGGGACCTGTTTCTCCAAGCCTGGTCCCGGCAGAGATCTTGCCGACTGCACCAATGTTGGTTACAGGGAATC  481
            .|||||.||||||||.|||||||||||.||.||||||||||||||||||||||||||||||||.||.|||||||
Sbjct  240  CCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATC  313

Query  482  CGGGTGTCCCTGTACCTGCAGCTGCTGCAGCTGCTGCACAGAAATTAATGCGAACAGACAGACTTGAGGTATGT  555
            |.||.||.||.||.||.||||||||.|||||||||||||||||.||||||||.|||||||||||.|||||.|||
Sbjct  314  CTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAGTTAATGCGGACAGACAGACTGGAGGTGTGT  387

Query  556  CGAGAGTACCAACGTGGCAATTGCAACCGAGGAGAAAATGATTGTCGGTTTGCTCATCCTGCTGACAGCACAAT  629
            |||||||||||.|||||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  388  CGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCACAAT  461

Query  630  GATTGACACCAATGACAACACAGTCACTGTGTGTATGGATTACATCAAAGGGAGATGCTCTCGGGAAAAGTGCA  703
            ||||||.|||||||||||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||||
Sbjct  462  GATTGATACCAATGACAACACAGTCACTGTCTGCATGGATTACATCAAGGGGAGATGCTCTCGGGAAAAGTGCA  535

Query  704  AATACTTTCATCCCCCTGCACATTTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCT  777
            |||||||.|||||.||.|||||..|||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  536  AATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCA  609

Query  778  GCACAGGCTGCAGCCACCGCAGCTGCCA----------------------------------------------  805
            ||||||||||||||.||.||||||||||                                              
Sbjct  610  GCACAGGCTGCAGCTACTGCAGCTGCCATGACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAAC  683

Query  806  --------TGGGAATTCCTCAAGCTGTACTTCCCCCATTACCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTG  871
                    |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  684  CTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTG  757

Query  872  CCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAACAGCATACA  945
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  758  CCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACA  831

Query  946  GCATTTCTCCCACCAGGCTCAATATTGTGCATGACACCCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTAC  1019
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  832  GCATTTCTCCCACCAGGCTCAATATTGTGCATGACACCCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTAC  905

Query 1020  GCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACAAGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGA  1093
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  906  GCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACAAGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGA  979

Query 1094  TACCCATAATATCTGCCGAACATCTGACTAGCCACAAGTATGTTACCCAGATG  1146
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  980  TACCCATAATATCTGCCGAACATCTGACTAGCCACAAGTATGTTACCCAGATG  1032

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