Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01440
Subject:
NR_145445.2
Aligned Length:
5220
Identities:
142
Gaps:
5067

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACGCGCGCAAACCCGGAAGCAGATCGCGTGGAGTGAAGGTCCCTCAGCGGCGCGATTGACATCTAAAGACTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTGGTACATGAGGAAGAAACCCGGAAAAGGAAAGCAGAGGAGTCAGGGATGGCTCTTCCTCAGGGTCTATTGAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGGTATCTCTTCCAAATGCACAATGAAGGAGTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCATCAACAGCACAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAACGTCATCACATTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGATTTTTCCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGATGAAAGAAATG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCATGAAGCACCCATGACAAAAATCAAAAAATTGATGGGTAGTACAGAGCAATATGATCACAGGCATGCTGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AACAAGCCTATTAAATATCAGCTTGGATCAAGCTTTCATTCACATCTGTCTGAACTCCACATATTTCAGCCCAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGGGAAAATTAATAATCAAGTGGAGAAGTCTATCAACGATGCTTCCTCGGTTTCAACAGCCCAAAGAATTTCTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTAGGCCCAAAACCCATATATCTAATAACTATGGGGATAATTTTCTGAATTATTCATTACTCACACAAAGACAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAAGTACGCATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAAGCCTTTAATTATAGCTCACTCTTAAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAAACATCAGATTATTCATCTAGGAGAGAAACAATATAAATGTGATGTATGTGACAAGGTCTTTATTCGGAAGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GATACCTTGCACGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGTCCTTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGTCAGATGTCATCCCTTACATATCATCATCGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAAAGCTTTCAGACACAATTCAGCCCTTCAAAGACATAGGAGAATTCATACTGGAGAGAAACCACATAAGTGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGAGTGTGGCAAGACCTTTAGTCAGAAGTCATACCTTGCATGCCATCGTAGCATTCATACTGGAAAGAAACCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TACGAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAACCTTGAAAGTCATAGGATAACTCATACTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGAGAAACCATACAAGTGTAATGATTGTGGCAAGACCTTCAGTCATATGTCAACCCTTACATGCCATCGTAGAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGATGAAGCTTTCCGTTTCAAATCAAGTCTTGAAAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CATAGGAGAATTCATAATGGAGAGAAACTGTACAAATGTAATGAGTGTGGCAAGACCTTCAGTCAGGAGTTATC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCTTACCTGCCATTGTAGACTTCATAGTGGAGAGAAACCTTGCAAGTGTGGAGAATGTGACAAGGCTTACAGTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCAAATAAAATCTTGAAATACGTCAGAAAATTCATACTGGAGAGAAATGTTATAAGTGTAATGATTGTGGCAAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATCTTCAGTCATACGTCATCCATTGTATACCATCATAAATTTCATAGTGGAGAGAAACCTTACAAATGTGAAGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATAGGAGAATTCACACTGGTGAGAAACCTTACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGTGTAATAGGTGTGGCAAGACCTTCAGTCATACATCATCCCTTACATGCCATCATAGACTTCATACTGGAGAG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AAACCTTACAAATGTGAAGAATGTGATGAAACTTTCAGATACAAATCAAATCTTGAAAGACATAGGAGAATTCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TAATGGAGAGAAACCGTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGAAGTCATGCCTTACACGCCATC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATAGACTTCATACTGGAAATAAATCTTATAAGTGTAATGAGTGTGGCAAGACCTTCAGTAAGGAGTTAACACAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCCATCATAGACGTCATACTGGAGAGAAACCTTAGAAGTGCAATGAGTGTGGCAAAACCTTTCATAGGCAGTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCGCTTATTTACCATCAAGCAATCCATGGCAGAGGGAAACTTTACAAATGTAATGATTGTCACCACGTCTTCAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TAATGCTACAACTATTGCAAATCATTGGAGAATCCATAATAAAGAGAGACCTTACAAGTGTGATAAATGTGACA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AATTTTTCAGACATCGTTCATACCTTGCAGTTCACGGGCGAACTCATGCTGGAGAGAAACCTTACAAATGTGAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAATGTGATAAAGCTTTCAGATTCAAATCAAACCTTGAAAGTCATAGGAGAATTCATACTAGAGAGAAACCTTA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAAGTGTAATGAGTGTGGTAAGATGTTCAGTCAAAATTCGGCCCTTGTAATTCATAAGGCAATTCATACTGGAG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGCAAAGCAAAGCTTGCATGTCATCATAGACTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CATACTGGAGAGAACGCTTGCAAGTGTAATAAATGTGGCGAGGTTTTTAATCAACAAGCACACCTTGCACGTCA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCATAGAACTCATACTGGAGAGAAACATTACAAGTGTAATGAGTGTGGCAAGACCTACTCTCACAATTCAGTCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TTGTAATTCATAAGACAATTCACACTGGGGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAACCTTCCATCAC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AATTCAGTCCTTGTAATTCATAAAACAATTCATACTGGAGAGAAACAAGCGTAATGAATGTGGCGAGGTTTTCA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATCAACAAGCACACGTTGCACGTCATCATAGAATTCATACTGGAGAGAAACCTTAGAAATGTGAAGAATGTGAC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AAAGTTTACAGTCGCAAATCAAACCTCGAAAGACAGGAGAATTCATACTGGAGAGAAACCATAAAAATGTAAGA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTTTTTGACAAGGCTTTCGGACGTGATTCACACCTGGCACAACATCCCAGAGTTCACACTGGAGAGAAACCTTA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CAAGTGTAATGAGTGTGTCAAAGCCTTTAGTGGGCAGTCAACACTTATTCACCATCAGGCAATCCGTAGTGTAG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GGAAACTTGACTAACGTAATGATTCTCACAACGTCTTCAGTAATGCTACAACCATTGTAAATCACTGGAGAAGC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CATAATGAAGAGAGATCTTACAAATGTAATAATTGTGGCAAATTTTTCAGACATCGTTCATACATTGCCGTTCA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TTGGCGAACTCATGCTGGAGAGAAATCTTACAATGTCATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TGCAAAACAGGAGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATCGTGGCAAAGCCTTTACTTCACAT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TCTCACCTCATTAGACATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CAGTCCGACTTCACTCCTTGCAGAATATCAGAAAATTCATTTTTCAGGATTTCTATGATGACTGGATTTTGAAT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TTTGTGGAACGCTTTTTCTCCATCTACTAAGGTGATGTGGTTTTAATCTTTCATTCTGTTCTAGTGGTATATAA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTGGCACTTGAATATCTACATTTTTT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TAATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAAAAATACATATTATGAGAA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AATTGTGCATGAATTTCACAATTTTTGCACCAAAATAAACTAGTGCTAGTCTGTTATAACATGTCTGAACAGGC  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TCTAGTTTGATGCCCTCAAAAGGATAAGACATGAGTATAAAAAGAGACTCCATCAAAGCAATATAAATTCTGAT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  GAAATTTAAACAAGAAGAAACATTAAATTTATGATGAGACCAGATGCAGTGGCTCAGGCCTGTAATCCCAGCAT  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  TTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACCAGCCTGGGAAACGTGGGGAAATCCC  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  CTTTTCTACAAAAAATACAAAAATTAGCTGGGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCTG  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  TGCAGGGAGGATGGCATGAACCTGGGAGGTCAAGATTGCAGTGAGCTATGATCATGCCACTGCACTCCAGCATG  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  GGTGATGGAGAGAGATACTGTCTTAAAAAAAGAATACTTGTGGTAACGTTTGGGTAGAGGAATAATGAAATCAT  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  TGATGCTTTATAAAAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACTTATTTTG  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  AGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCACATCATTTTTACAGAAAAA  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  AAAATTAATCTTGTTCATGCTGCAATGAAGAGGACTGACAGCAAACAGCAGAAACATAGTCAGAATTTAGAGAA  4588

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4589  CAGCCTGGTTAACATGGTGAAACACCATCTCTAGTAAAAATACAAAAATTAGCTCAGCATGGTGGCATGCGCCT  4662

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4663  GTAATCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCTCTTGAACCCAGGAGGTGGAGGATGCAGTGAACTGA  4736

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4737  GATGGCAACATTACACTCTAGCCTGAGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAATTGTCAAGTTC  4810

Query    1  ----------------------------------------------------ATGTCTTCTCACAAGACTTTCA  22
                                                                |..||||||||.||||||||||
Sbjct 4811  CTTCTCTTCCATTCTTTGCCATCGTGGTGTGTGCTTGACTCTGCTTCTTGCCACATCTTCTCAGAAGACTTTCA  4884

Query   23  GGATTAAGCGATTCCTGGCCAAGAAACAAAAGCAAAATCGTCCCATTCCCCAGTGGATTCGGATGAAAACTGGA  96
            |||||||||||||||||||||||||||||||||||||.|.|||||.|||||.||||||||.|||.||||||||.
Sbjct 4885  GGATTAAGCGATTCCTGGCCAAGAAACAAAAGCAAAACCATCCCACTCCCCTGTGGATTCAGATCAAAACTGGT  4958

Query   97  AATAAAATCAGGTACAACTCCAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTA-----------------  153
            |||||||||||||||.|||||||||||||||||||||||||||||||||||||||||                 
Sbjct 4959  AATAAAATCAGGTACGACTCCAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATAAGGAATTGCATGTGA  5032

Query  154  --------------------------------------------------------------------------  153
                                                                                      
Sbjct 5033  GATGGCACACATATTTATGCTGTCTGAGCATCACAATCACGTTACCATATCAAGCTGAAAATGTCACCACTATC  5106

Query  154  --------------------------------------------------------------------------  153
                                                                                      
Sbjct 5107  TGGACAGTTGGACATGTTTTATTGGGAATATGTTTTTTCTCTGTAAATTTGTTATAAACGCATTGGTTGGCTGT  5180

Query  154  ----------------------------------------  153
                                                    
Sbjct 5181  GTTCAGTAATAAACGTGAGACTTTTCATTTCAAAACAAAA  5220

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