Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02208
Subject:
NR_163907.1
Aligned Length:
2778
Identities:
1769
Gaps:
1009

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGTCGCTAAGGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGA  74

Query    1  -----------------------ATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG  51
                                   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCCGCGCTCCGCCCCCGCTACCATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG  148

Query   52  CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGA  125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGA  222

Query  126  GGAGGAGGAGGAGGAAGATGATGATGAGGAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCC  199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGAGGAGGAGGAGGAAGATGATGATGAGGAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCC  296

Query  200  TAAATGATGCAAACTTTGATAATTTTGTGGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGT  273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TAAATGATGCAAACTTTGATAATTTTGTGGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGT  370

Query  274  GGACATTGCAAGCAGTTTGCTCCGGAATATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCC  347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGACATTGCAAGCAGTTTGCTCCGGAATATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCC  444

Query  348  TGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCA  421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGTTGCCAAGATCGATGCAACCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCA  518

Query  422  AGATCCTTAAGAAGGGGCAGGCTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGA  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGATCCTTAAGAAGGGGCAGGCTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGA  592

Query  496  GAAGTCTCCCAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGT  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAAGTCTCCCAGCCCGACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGT  666

Query  570  TGTGAATGATGCAGATATCATTCTGGTGGAGTTTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCG  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGTGAATGATGCAGATATCATTCTGGTGGAGTTTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCG  740

Query  644  AGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCA  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGTATGAGAAGGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCA  814

Query  718  GAAACAGACCTGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTA  791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAAACAGACCTGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTA  888

Query  792  TGACTACAACGGCCCACGAGAAAAATATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGG  865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGACTACAACGGCCCACGAGAAAAATATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGG  962

Query  866  AGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAG  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGATTCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAG  1036

Query  940  GGGGAGAGTGACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCA  1013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGGGAGAGTGACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCA  1110

Query 1014  CACTTTCAGCACAGAAATAGCAAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAAT  1087
            ||||||||||||||||||||||||                                                  
Sbjct 1111  CACTTTCAGCACAGAAATAGCAAA--------------------------------------------------  1134

Query 1088  TCCAGTCCAAGTATGAGCCCCGGAGCCACATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGAC  1161
                                                                                      
Sbjct 1135  --------------------------------------------------------------------------  1134

Query 1162  TTCGTGCTGAAGTACGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCG  1235
                                                      ||||||||||||||||||||||||||||||||
Sbjct 1135  ------------------------------------------GTGTCAAACGATGCTAAGCGCTACACCAGGCG  1166

Query 1236  CCCCCTGGTGGTCGTCTACTACAGTGTGGACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCA  1309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167  CCCCCTGGTGGTCGTCTACTACAGTGTGGACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCA  1240

Query 1310  AAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAG  1383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241  AAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAG  1314

Query 1384  GTGAAGGACCTGGGGCTCAGCGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTT  1457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315  GTGAAGGACCTGGGGCTCAGCGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTT  1388

Query 1458  CGCCATGGAGCCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGA  1531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389  CGCCATGGAGCCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGA  1462

Query 1532  AGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTT  1605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463  AGCCAGTCATCAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTT  1536

Query 1606  GACTCCATTGTGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCA  1679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537  GACTCCATTGTGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCA  1610

Query 1680  GCTAGAGCCCGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACG  1753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1611  GCTAGAGCCCGTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACG  1684

Query 1754  CCACTGCCAACGACGTCCCCAGCGACCGCTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGG  1827
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685  CCACTGCCAACGACGTCCCCAGCGACCGCTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGG  1758

Query 1828  GACAAAAAGAACCCAGTTAAATTTGAGGGTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACA  1901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759  GACAAAAAGAACCCAGTTAAATTTGAGGGTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACA  1832

Query 1902  TGCCACAAAACTGAGCAGGACCAAGGAAGAGCTT----------------------------------------  1935
            ||||||||||||||||||||||||||||||||||                                        
Sbjct 1833  TGCCACAAAACTGAGCAGGACCAAGGAAGAGCTTTGAAGGCCTGAGGTCTGCGGAAGGTGGGAGGAGGCAGACG  1906

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 1907  CCCTGCGTGGCCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTTTTTTT  1980

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 1981  TTTTTTTTAATTTTTTATACTTTGGTGTTTCACTTCATGCTCTGAATACTGAATAACCATGAATGACTGAATAG  2054

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2055  TTTAGTCCAGATTTTTACAGAGGATACATCTATTTTTATCATTATTTGGGGTTTGAAAAATTTTTTTTTACACC  2128

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2129  TTCTAATTTCTTTATTTCTCAAAGCAGATAATTCTTCTGTGTGAAAATGTTTTCTTTTTTTAATTTAAGGTTTA  2202

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2203  AAATTCCTTTTCCAAATCATGTTGATTTTGCTCTTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTG  2276

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2277  GCTTCTGGTATGTGTTTCTGATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGG  2350

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2351  GTGCTGTTTCAGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCA  2424

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2425  GGGTCCCCCAGGGTGGGCTCAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGT  2498

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2499  GCCGGAGCAGAAAGGACCCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTGGCA  2572

Query 1936  ----------------------------------------  1935
                                                    
Sbjct 2573  ATGGAATAAAACACGATTAAAAACGTTAAGAACTGCGTTA  2612

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