Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02531
Subject:
XM_006504916.2
Aligned Length:
2652
Identities:
2199
Gaps:
99

Alignment

Query    1  ATG--------------TCGGT--GGTGGGGTTGGACGTGGGCTCGCAGAGCTGCT---------ACATCGC--  47
            |||              |||||  |.|    ||.|.|...|||.| |.||||.|||         .|||.||  
Sbjct    1  ATGGAGGCCGGGCAAGCTCGGTCAGTT----TTAGCCAATGGCGC-CCGAGCAGCTGCCCTGTCACCATGGCAA  69

Query   48  ----GGTAGCCCGGGCCGGGGGCATCGAGACCATC--GCCAATGAGT----TC---------------------  90
                ||..|||||   |||.||      |||||.|  .|||.||.||    ||                     
Sbjct   70  CTCAGGCCGCCCG---CGGAGG------GACCAGCAGTCCATTGGGTAGAATCTTTCTCGAAGGCTCGAGAAGA  134

Query   91  ----AGCGACCGGTGCAC---------CCCGTCAGTCATATCATTTGGATCAAAAAATAGAACAATCGGAGTTG  151
                ||||...|..||||         ||.|||||||||||||||||||||||||||.||||||||.|||||||
Sbjct  135  AGGAAGCGGAAGTGGCACGTGGAGGCGCCGGTCAGTCATATCATTTGGATCAAAAAACAGAACAATTGGAGTTG  208

Query  152  CAGCCAAAAATCAGCAAATCACTCATGCAAACAATACGGTGTCTAACTTCAAAAGATTTCATGGCCGAGCATTC  225
            ||||||||||.|||||||||||||||||||||||||||||.||||.|||.||.||||||||||||.||||||||
Sbjct  209  CAGCCAAAAACCAGCAAATCACTCATGCAAACAATACGGTCTCTAGCTTTAAGAGATTTCATGGCAGAGCATTC  282

Query  226  AATGACCCCTTCATTCAAAAGGAGAAGGAAAACTTGAGTTACGATTTGGTTCCATTGAAAAATGGTGGAGTTGG  299
            |||||||||||||||||.|||||.|||||.|||.||||.||.||||||||.|||.|||||||||||||.||.||
Sbjct  283  AATGACCCCTTCATTCAGAAGGAAAAGGAGAACCTGAGCTATGATTTGGTCCCAATGAAAAATGGTGGCGTGGG  356

Query  300  AATAAAGGTAATGTACATGGGTGAAGAACATCTATTTAGTGTGGAGCAGATAACAGCCATGTTGTTGACTAAGC  373
            |||||||||.||||||||||.||||||||||.|.||.||||||||||||||||||||||||.||.||||||||.
Sbjct  357  AATAAAGGTCATGTACATGGATGAAGAACATTTCTTCAGTGTGGAGCAGATAACAGCCATGCTGCTGACTAAGT  430

Query  374  TGAAGGAAACTGCTGAAAACAGCCTCAAGAAACCAGTAACAGATTGTGTTATTTCAGTCCCCTCCTTCTTTACA  447
            |.|||||||||||.|||||||.|||||||||.|||||.|||||.|||||.||.||||||||.||||||||.|||
Sbjct  431  TAAAGGAAACTGCAGAAAACAACCTCAAGAAGCCAGTGACAGACTGTGTCATCTCAGTCCCATCCTTCTTCACA  504

Query  448  GATGCTGAGAGGCGATCTGTGTTAGATGCTGCACAGATTGTTGGCCTAAACTGTTTAAGACTTATGAATGACAT  521
            |||||||||.|..|.||||||.|.||||||||.||||||||.|||.|.|||||.||..|.||.|||||||||||
Sbjct  505  GATGCTGAGCGAAGGTCTGTGCTGGATGCTGCGCAGATTGTGGGCTTGAACTGCTTGCGGCTCATGAATGACAT  578

Query  522  GACAGCTGTTGCTTTGAATTACGGAATTTATAAGCAGGATCTCCC--AAGCCTGGATGAGAAACCTCGGATAGT  593
            |||.|||||||||||||||||.||.|||||||||||.||||||||  |.|||  ||.|||||.||.|||.|.||
Sbjct  579  GACGGCTGTTGCTTTGAATTATGGGATTTATAAGCAAGATCTCCCGAATGCC--GAGGAGAAGCCACGGGTGGT  650

Query  594  GGTTTTTGTTGATATGGGACATTCAGCTTTTCAAGTGTCTGCTTGTGCTTTTAACAAGGGAAAATTGAAGGTAC  667
            |||.||||||||.||||||||.|||.||||.|||||||||||.||||||||||||||.||||||.|||||||.|
Sbjct  651  GGTGTTTGTTGACATGGGACACTCATCTTTCCAAGTGTCTGCCTGTGCTTTTAACAAAGGAAAACTGAAGGTTC  724

Query  668  TGGGAACAGCTTTTGATCCTTTCTTAGGAGGAAAAAACTTCGATGAAAAGTTAGTGGAACATTTTTGTGCAGAA  741
            |.||.||||||||||||||.||||||||||||||.|||||.|||||.|||.||||.||||||||||||||.|||
Sbjct  725  TAGGCACAGCTTTTGATCCCTTCTTAGGAGGAAAGAACTTTGATGAGAAGCTAGTAGAACATTTTTGTGCTGAA  798

Query  742  TTTAAAACTAAGTACAAGTTGGATGCAAAATCCAAAATACGAGCACTCCTACGTCTGTATCAGGAATGTGAAAA  815
            ||||||||.||||||||.||||||||||||||||||||.|||||.|||||.|||||..|||||||.||||||||
Sbjct  799  TTTAAAACCAAGTACAAATTGGATGCAAAATCCAAAATTCGAGCCCTCCTTCGTCTCCATCAGGAGTGTGAAAA  872

Query  816  ACTGAAAAAGCTAATGAGCTCTAACAGCACAGACCTTCCACTGAATATCGAATGCTTTATGAATGATAAAGATG  889
            ..||||||||||.|||||.|||||||||||.|||||.||.|||||.|||||.||||||||||||||.||.||||
Sbjct  873  GTTGAAAAAGCTCATGAGTTCTAACAGCACGGACCTGCCGCTGAACATCGAGTGCTTTATGAATGACAAGGATG  946

Query  890  TTTCCGGAAAGATGAACAGGTCACAATTTGAAGAACTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCCCTT  963
            |.||.||.|||||||||||||||||.|||||||||||.||||||||.||.||||||||.|||||.||.||||||
Sbjct  947  TCTCTGGGAAGATGAACAGGTCACAGTTTGAAGAACTGTGTGCTGAGCTCCTGCAAAAAATAGAGGTCCCCCTT  1020

Query  964  TATTCACTGTTGGAACAAACTCATCTCAAAGTAGAAGATGTGAGTGCAGTTGAGATTGTTGGAGGCGCTACACG  1037
            .|.||..||.|||.|||.|||||.|||||.|..||||||||||||||..|||||||.||.|||||.||.|||.|
Sbjct 1021  CACTCGTTGATGGCACAGACTCAGCTCAAGGCTGAAGATGTGAGTGCCATTGAGATAGTGGGAGGTGCCACAAG  1094

Query 1038  AATTCCAGCTGTGAAGGAAAGAATTGCCAAATTCTTTGGAAAAGATATTAGCACAACACTCAATGCAGATGAAG  1111
            |||.|||||||||||.||||||||||||||.|||||||||||||||.|.|||||.||.|||||||||||.||||
Sbjct 1095  AATCCCAGCTGTGAAAGAAAGAATTGCCAAGTTCTTTGGAAAAGATGTCAGCACCACGCTCAATGCAGACGAAG  1168

Query 1112  CAGTAGCCAGAGGATGTGCATTACAGTGTGCAATACTTTCCCCGGCATTTAAAGTTAGAGAATTTTCCGTCACA  1185
            |.||.||||||||.||||||.|.|||||||||||.|||||.||||||||||||||||||||.||.||.|||||.
Sbjct 1169  CTGTGGCCAGAGGCTGTGCACTGCAGTGTGCAATTCTTTCTCCGGCATTTAAAGTTAGAGAGTTCTCTGTCACC  1242

Query 1186  GATGCAGTTCCTTTTCCAATATCTCTGATCTGGAACCATGATTCAGAAGATACTGAAGGTGTTCATGAAGTCTT  1259
            |||||||||||||||||||||||||||.||||||||||.||.||.|||||.||.||||||||.||.||.||.||
Sbjct 1243  GATGCAGTTCCTTTTCCAATATCTCTGGTCTGGAACCACGACTCGGAAGAAACGGAAGGTGTGCACGAGGTGTT  1316

Query 1260  TAGTCGAAACCATGCTGCTCCTTTCTCCAAAGTTCTCACCTTTCTGAGAAGGGGGCCTTTTGAGCTAGAAGCTT  1333
            .|||||.||||||||||||||||||||||||||.||||||||.||||||||||||||.||||||||||||||||
Sbjct 1317  CAGTCGGAACCATGCTGCTCCTTTCTCCAAAGTGCTCACCTTCCTGAGAAGGGGGCCCTTTGAGCTAGAAGCTT  1390

Query 1334  TCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTTGTAGTTCAGAATGTTTCTGCA  1407
            ||||||||||.||.|||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||
Sbjct 1391  TCTATTCTGACCCTCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGTTTTGTTGTTCAGAATGTTTCTGCA  1464

Query 1408  CAGAAAGATGGAGAAAAATCTAGAGTAAAAGTCAAAGTGCGAGTCAACACCCATGGCATTTTCACCATCTCTAC  1481
            ||||||||||||||.||.||.|||||.||.|||||||||||.||.|||||.||||||||.|||||||||||.||
Sbjct 1465  CAGAAAGATGGAGAGAAGTCGAGAGTGAAGGTCAAAGTGCGTGTGAACACACATGGCATCTTCACCATCTCCAC  1538

Query 1482  GGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAAATGTCTTCT-----GAAGCTGACATGGAGTGTCT  1550
            |||.||.|||||||||||.|||||.||.|||||..|.|  |||.||.||     ||.||.||||||||.||||.
Sbjct 1539  GGCTTCCATGGTGGAGAAGGTCCCGACCGAGGAAGAGG--ATGGCTCCTCTCTCGAGGCAGACATGGAATGTCC  1610

Query 1551  GAATCAGAGACCACCAGAAAACCCAGACACTGATAAAAATGTCCAGCAAGACAACAGTGAAGCTGGAACACAGC  1624
            .||.|||||.|||.||||||.|.|.||....|||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1611  AAACCAGAGGCCAACAGAAAGCTCGGATGTGGATAAAAATATCCAGCAAGACAACAGTGAAGCTGGAACACAGC  1684

Query 1625  CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAACTTACCTCAGAAGAAAACAAA  1698
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1685  CCCAGGTACAAACTGATGGTCAACAAACCTCACAGTCTCCCCCTTCACCTGAACTTACCTCAGAAGAAAGCAAA  1758

Query 1699  ATCCCAGATGCTGACAAAGCAAATGAAAAAAAAGTTGACCAGCCTCCAGAAGCTAAAAAGCCCAAAATAAAGGT  1772
            |.|||||||||||||||||||||||||||.||||||||.||||||||||||||.||.||.||.|||||||||||
Sbjct 1759  ACCCCAGATGCTGACAAAGCAAATGAAAAGAAAGTTGATCAGCCTCCAGAAGCCAAGAAACCTAAAATAAAGGT  1832

Query 1773  GGTGAATGTTGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAAAGACCTTCTTAACATGTATATTG  1846
            |||.|||||||||||||||.|.||||||||||||||.|||||||||||||.|||||||||||||||||||||||
Sbjct 1833  GGTAAATGTTGAGCTGCCTGTAGAAGCCAACTTGGTATGGCAGTTAGGGAGAGACCTTCTTAACATGTATATTG  1906

Query 1847  AGACAGAGGGTAAGATGATAATGCAAGATAAATTGGAAAAAGAAAGGAATGATGCTAAAAATGCAGTTGAGGAA  1920
            ||||||||||.||||||||.||||||||.||..||||.||.||..||||.||.||.||.||.||.||.|||||.
Sbjct 1907  AGACAGAGGGCAAGATGATCATGCAAGACAAGCTGGAGAAGGAGCGGAACGACGCCAAGAACGCCGTGGAGGAG  1980

Query 1921  TATGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATATGAAAAATTTATATGTGAGCAGGATCATCAAAATTT  1994
            |.|||.|||||||||||.||||||||.||||||||||||||.|||||.||||||||||||||.|||.|.||.||
Sbjct 1981  TGTGTATATGAGTTCAGGGACAAGCTATGTGGACCATATGAGAAATTCATATGTGAGCAGGAACATGAGAAGTT  2054

Query 1995  TTTGAGACTCCTCACAGAAACTGAAGACTGGCTGTATGAAGAAGGAGAGGACCAAGCTAAACAAGCATATGTTG  2068
            .|||||.||.||.|||||.||.|||||||||||||||||.|||||.||||||||.|||||.||.|||||..|||
Sbjct 2055  CTTGAGGCTTCTAACAGAGACGGAAGACTGGCTGTATGAGGAAGGGGAGGACCAGGCTAAGCAGGCATACATTG  2128

Query 2069  ACAAGTTGGAAGAATTAATGAAAATTGGCACTCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACGGCCAAAA  2142
            |||||||||||||..|.||||||||.||||||||.||||||||..|.|||||.||||||||.|||||.||.|||
Sbjct 2129  ACAAGTTGGAAGAGCTGATGAAAATGGGCACTCCTGTTAAAGTCAGATTTCAAGAAGCTGAGGAACGACCGAAA  2202

Query 2143  ATGTTTGAAGAACTAGGACAGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACTTCAGAAATAAGGATGAGAA  2216
            .||||.||.||.||.||.|||.|.||||||||.|||||||||||.|||||.|||||||||...|||||||||||
Sbjct 2203  GTGTTGGAGGAGCTGGGGCAGCGCCTGCAGCACTATGCCAAGATTGCAGCGGACTTCAGAGGCAAGGATGAGAA  2276

Query 2217  ATACAACCATATTGATGAGTCTGAAATGAAAAAAGTGGAGAAGTCTGTTAATGAAGTGATGGAATGGATGAATA  2290
            |||||||||.||||||||.||.||||||||.||.||.|||||||||||||||||.||||||||.||||||||||
Sbjct 2277  ATACAACCACATTGATGAATCAGAAATGAAGAAGGTTGAGAAGTCTGTTAATGAGGTGATGGAGTGGATGAATA  2350

Query 2291  ATGTCATGAATGCTCAGGCTAAAAAGAGTCTTGATCAGGATCCAGTTGTACGTGCTCAGGAAATTAAAACAAAA  2364
            ||||||||||||||||||||||||..|||||||||||.||.||.|||||.||..||||.|||||.|.|.|.||.
Sbjct 2351  ATGTCATGAATGCTCAGGCTAAAAGAAGTCTTGATCAAGACCCTGTTGTTCGAACTCATGAAATCAGAGCGAAG  2424

Query 2365  ATCAAGGAATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAATCACCCAAACTGGA  2438
            .||||||||||||||||....||||||||.||||||||.|||||.|||||||||||.||.|||||.||||||||
Sbjct 2425  GTCAAGGAATTGAACAATGTTTGTGAACCTGTTGTAACTCAACCCAAACCAAAAATCGAGTCACCTAAACTGGA  2498

Query 2439  AAGAACTCCAAATGGCCCAAATATTGATAAAAAGGAAGAAGATTTAGAAGACAAAAACAATTTTGGTGCTGAAC  2512
            .|||||||||||||||||||||||||   |.|||.|||||||||||||||.||||||.|||.|||||||||||.
Sbjct 2499  GAGAACTCCAAATGGCCCAAATATTG---ACAAGAAAGAAGATTTAGAAGGCAAAAATAATCTTGGTGCTGAAG  2569

Query 2513  CTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAATTCTGTTAATATGGACTTGGAC  2574
            ||||.|||||||||||||||||..|||||||||||||....|||||.||.||||||.|||||
Sbjct 2570  CTCCGCATCAGAATGGTGAATGCCACCCTAATGAGAAGGGCTCTGTCAACATGGACCTGGAC  2631

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