Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03028
Subject:
NR_028476.1
Aligned Length:
2097
Identities:
1001
Gaps:
1096

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGTCCTTCAGCCTCGTTCCCGGGCAGTATAAAGTTTGCTGTCTCCTTTGTTCGCCCTCGTTGCGCAGTAGTGCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCGGCTTCGCGGTTCGGTCCTCGCACCCGGCAGCCGCCACTGGTGCTGAGCTGCTAGGAAGCCCCTATCGCCG  148

Query    1  --------------------------------------------------------------ATGGTTGAAGCA  12
                                                                          ||||||||||||
Sbjct  149  AGCTCGTTGGAGCTTGAACCCATTGTCACCCCTCCGACTCACCGGCCCAAAAAAAAAAAAACATGGTTGAAGCA  222

Query   13  GATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACGGAAACAAATGAGAAAGCTCTTGAAGCAGTATTTGG  86
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACGGAAACAAATGAGAAAGCTCTTGAAGCAGTATTTGG  296

Query   87  CAAATATGGACGAATAGTGGAAGTACTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGATTTGCTTTTG  160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAAATATGGACGAATAGTGGAAGTACTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGATTTGCTTTTG  370

Query  161  TCACCTTTGAAAGCCCAGCAGACGCTAAGGATGCAGCCAGAGACATGAATGGAAAGTCATTAGATGGAAAAGCC  234
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct  371  TCACCTTTGAAAGCCCAGCAGACGCTAAGGATGCAGCCAGAGACATGAATGGAAA-------------------  425

Query  235  ATCAAGGTGGAACAAGCCACCAAACCATCATTTGAAAGTGGTAGACGTGGACCGCCTCCACCTCCAAGAAGTAG  308
                                                                                      
Sbjct  426  --------------------------------------------------------------------------  425

Query  309  AGGCCCTCCAAGAGGTCTTAGAGGTGGAAGAGGAGGAAGTGGAGGAACCAGGGGACCTCCCTCACGGGGAGGAC  382
                                                                                      
Sbjct  426  --------------------------------------------------------------------------  425

Query  383  ACATGGATGACGGTGGATATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTCCCAGTAAAAAGAGGA  456
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  426  -----GATGACGGTGGATATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTCCCAGTAAAAAGAGGA  494

Query  457  CCACCACCAAGAAGTGGGGGTCCTCCTCCTAAGAGATCTGCACCTTCAGGACCAGTTCGCAGTAGCAGTGGAAT  530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  495  CCACCACCAAGAAGTGGGGGTCCTCCTCCTAAGAGATCTGCACCTTCAGGACCAGTTCGCAGTAGCAGTGGAAT  568

Query  531  GGGAGGAAGAGCTCCTGTATCACGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAACCGCTGCCCTCTC  604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  569  GGGAGGAAGAGCTCCTGTATCACGTGGAAGAGATAGTTATGGAGGTCCACCTCGAAGGGAACCGCTGCCCTCTC  642

Query  605  GTAGAGATGTTTATTTGTCCCCAAGAGATGATGGGTATTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCA  678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  643  GTAGAGATGTTTATTTGTCCCCAAGAGATGATGGGTATTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCA  716

Query  679  AGTTCTCGTGATACTAGAGATTATGCACCACCACCACGAGATTATACTTACCGTGATTATGGTCATTCCAGTTC  752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  717  AGTTCTCGTGATACTAGAGATTATGCACCACCACCACGAGATTATACTTACCGTGATTATGGTCATTCCAGTTC  790

Query  753  ACGTGATGACTATCCATCAAGAGGATATAGCGATAGAGATGGATATGGTCGTGATCGTGACTATTCAGATCATC  826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  791  ACGTGATGACTATCCATCAAGAGGATATAGCGATAGAGATGGATATGGTCGTGATCGTGACTATTCAGATCATC  864

Query  827  CAAGTGGAGGTTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCC  900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  865  CAAGTGGAGGTTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCC  938

Query  901  CCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTGGAAGTCGAGA  974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  939  CCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGGTGGAAGTCGAGA  1012

Query  975  CAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTC  1048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013  CAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTC  1086

Query 1049  CCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGT  1122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087  CCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGT  1160

Query 1123  GGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATAC-----------------------  1173
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct 1161  GGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATACTAGAAACAAACAAAACTTTGGAC  1234

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1235  CAAAATCCCAGTTCAAAGAAACAAAAAGTGGAAACTATTCTATCATAACTACCCAAGGACTACTAAAAGGAAAA  1308

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1309  ATTGTGTTACTTTTTTTAAATTCCCTGTTAAGTTCCCCTCCATAATTTTTATGTTCTTGTGAGGAAAAAAGTAA  1382

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1383  AACATGTTTAATTTTATTTGACTTTCGCATTGCTTTTCAACAAGCAAATGTTAAATGTGTTAAGACTTGTACTA  1456

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1457  GTGTTGTAACTTTCCAAGTAAAAGTATCCCCTAAAGGCCACTTCCTATCTGATTTTTCCCAGCAAATGAGGCAG  1530

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1531  GCAATTCTAAGATCTTCCACAAAACATCTAGCCATCTAAAATGGAGAGATGAATCATTCTACCTATACAAACAA  1604

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1605  GCTAGCTATTAGAGGGTGGTTGGGGTATGCTACTCATAAGATTTCAGGGTGTCTTCCAACTGAAATCTCAATGT  1678

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1679  TCTCAGTACGAAAAACCTGAAATCACATGCCTATGTAAGGAAAGTGCTATTCACCCAGTAAACCCAAAAAAGCA  1752

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1753  AATGGATAATGCTGGCCATTTTGCCTTTCTGACATTTCCTTGGGAATCTGCAAGAACCTCCCCTTTCCCTTCCC  1826

Query 1174  --------------------------------------------------------------------------  1173
                                                                                      
Sbjct 1827  CCAATAAGACCATTTAAGTGTGTGTTAAACAACTACAGAATACTAAATAAAAAGTTTGGCCAAAACCAACCATG  1900

Query 1174  -------------------------  1173
                                     
Sbjct 1901  AAGCTGCAAAAAAAAAAAAAAAAAA  1925

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