Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03473
Subject:
XM_017001535.1
Aligned Length:
1727
Identities:
1332
Gaps:
379

Alignment

Query    1  ATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCTCCTGCATCTGTCCCTGGCCTAAACCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCTCCTGCATCTGTCCCTGGCCTAAACCC  74

Query   75  GACGCTAGGCTGGAGGGAGCGACTGCGGGCCGGGCTGGCGGGGACTGGGGCCTCGTTGTGGTTCGTGGCGGGGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GACGCTAGGCTGGAGGGAGCGACTGCGGGCCGGGCTGGCGGGGACTGGGGCCTCGTTGTGGTTCGTGGCGGGGC  148

Query  149  TGGGGCTGCTTTACGCCCTGAGGATCCCTTTGAGGCTGTGTGAGAATTTGGCAGCGGTGACTGTATTTTTAAAT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGGGCTGCTTTACGCCCTGAGGATCCCTTTGAGGCTGTGTGAGAATTTGGCAGCGGTGACTGTATTTTTAAAT  222

Query  223  TCATTGACACCCAAATTCTATGTGGCACTTACAGGGACCTCTTCATTGATATCAGGACTAATATTTATATTTGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCATTGACACCCAAATTCTATGTGGCACTTACAGGGACCTCTTCATTGATATCAGGACTAATATTTATATTTGA  296

Query  297  ATGGTGGTACTTCCATAAGCATGGCACATCTTTTATTGAGCAAGTATCTGTAAGCCATTTGCAACCACTGATGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATGGTGGTACTTCCATAAGCATGGCACATCTTTTATTGAGCAAGTATCTGTAAGCCATTTGCAACCACTGATGG  370

Query  371  GAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAAATGAAACCAGCAGACAGAAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAAATGAAACCAGCAGACAGAAT  444

Query  445  TTGTCAGAATGTAAGGTATGGAGAAACCCTCTAAATCTTTTCAGAGGAGCAGAATATAGGAGATACACTTGGGT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTGTCAGAATGTAAGGTATGGAGAAACCCTCTAAATCTTTTCAGAGGAGCAGAATATAGGAGATACACTTGGGT  518

Query  519  GACTGGTAAAGAGCCACTTACATACTATGACATGAACCTGTCAGCTCAGGACCATCAGACCTTTTTCACCTGTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GACTGGTAAAGAGCCACTTACATACTATGACATGAACCTGTCAGCTCAGGACCATCAGACCTTTTTCACCTGTG  592

Query  593  ACACAGATTTTTTACGTCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGAAAGAAATCCTCCAGCTCGAATC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACACAGATTTTTTACGTCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGAAAGAAATCCTCCAGCTCGAATC  666

Query  667  AAAGCAGCCTATCAAGCTTTAGAATTAAACAATGACTGTGCCACTGCATATGTTCTACTGGCTGAGGAAGAAGC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAAGCAGCCTATCAAGCTTTAGAATTAAACAATGACTGTGCCACTGCATATGTTCTACTGGCTGAGGAAGAAGC  740

Query  741  AACAACTATTGTAGATGCTGAAAGGTTATTTAAACAGGCACTCAAGGCAGGAGAAACAATTTATAGGCAGTCAC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AACAACTATTGTAGATGCTGAAAGGTTATTTAAACAGGCACTCAAGGCAGGAGAAACAATTTATAGGCAGTCAC  814

Query  815  AGCAGTGCCAGCACCAAAGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACCAATGTACTGGTATATATTAAA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCAGTGCCAGCACCAAAGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACCAATGTACTGGTATATATTAAA  888

Query  889  AGAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAATAAGAGAAGCAGTAAAAATAATGAGAGATTTGATGAA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAATAAGAGAAGCAGTAAAAATAATGAGAGATTTGATGAA  962

Query  963  AGAATTTCCTCCTCTTACCATGTTGAACATCCATGAAAATCTCTTAGAATCACTTTTAGAATTACAGGCCTATC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAATTTCCTCCTCTTACCATGTTGAACATCCATGAAAATCTCTTAGAATCACTTTTAGAATTACAGGCCTATC  1036

Query 1037  CAGATGTTCAGGCAGTCCTAGCAAAATATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTACACAGCA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CAGATGTTCAGGCAGTCCTAGCAAAATATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTACACAGCA  1110

Query 1111  GCACTGTTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCAGAAACAGCCTCCAGAAGAGGATTAAGCACAGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GCACTGTTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCAGAAACAGCCTCCAGAAGAGGATTAAGCACAGC  1184

Query 1185  AGAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTGGAATTTAATCCTCATGTTCCAAAATATTTATTAGAGA  1258
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |.|| 
Sbjct 1185  AGAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTGGAATTTAATCCTCATGTTCCAAAA--------ACAG-  1249

Query 1259  TGAAAAGTTTAATTTTACCTCCAGAACACATTCTGAAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCTTT  1332
                 |||||                                                      |||||||...
Sbjct 1250  -----AGTTT------------------------------------------------------TGCTTTCGCC  1264

Query 1333  CATCTTCAGCACTGGAAACGAATAGAAGGTGCTCTTAATCTGTTACAGTGTACATGGGAAGGCACTTTTAGAAT  1406
            ||     ||  |||||                          .||||||           |||      |||||
Sbjct 1265  CA-----AG--CTGGA--------------------------GTACAGT-----------GGC------AGAAT  1288

Query 1407  GATTCCATACCCGTTAGAGAAAGGACATCTATTTTACCCTTATCCCAGCTGCACAGAGACGGCTGATAGAGAGC  1480
                                                  |||..|.|| |||||                     
Sbjct 1289  --------------------------------------CTTGGCTCA-CTGCA---------------------  1302

Query 1481  TATTACCTACCTTTCATCATGTTTCTGTTTACCCAAAAAAGGAGCTTCCTTTGTTCATCCATTTCACAGCAGGA  1554
                ||||.|                                 ||.|||...|||||          |||  ||
Sbjct 1303  ----ACCTCC---------------------------------GCCTCCAGAGTTCA----------AGC--GA  1327

Query 1555  TTTTGCTCTTCTACAGCAATGATAGCCATTCTCA--CTCACCAGTTTCCTGAAATCATGGGTATTTTTGCTAAA  1626
            |     ||||||.|                ||||  |||.|.||                              
Sbjct 1328  T-----TCTTCTGC----------------CTCAGCCTCCCAAG------------------------------  1350

Query 1627  GCTGTGCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTCAGGCTTTGAGGAGAATACACAGGATTTGAAGTC  1700
                                                                                      
Sbjct 1351  --------------------------------------------------------------------------  1350

Query 1701  AGAAGACCTAGGTTTGAGTTCTGGC  1725
                                     
Sbjct 1351  -------------------------  1350

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