Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03523
Subject:
XM_017001591.2
Aligned Length:
1754
Identities:
1066
Gaps:
688

Alignment

Query    1  ATGGACCTAATGAACGGGCAGGCAAGCAGTGTCAATATTGCAGCTACTGCTTCTGAGAAAAGTAGCAGCTCTGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATCCTTAAGTGACAAAGGCTCTGAATTGAAGAAAAGCTTTGATGCTGTGGTATTCGATGTTCTTAAGGTTACAC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGAAGAATATGCGGGTCAGATAACATTAATGGATGTTCCAGTATTTAAAGCTATTCAACCAGATGAGCTTTCA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGTTGTGGATGGAATAAAAAAGAAAAATATAGTTCTGCACCAAATGCAGTTGCCTTCACAAGAAGATTCAATCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGTAAGCTTTTGGGTTGTTAGAGAGATTCTTCATGCTCAAACATTAAAAATTAGAGCAGAAGTTTTGAGCCACT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ATATTAAAACTGCTAAGAAACTGTATGAGCTGAATAACCTTCATGCACTTATGGCAGTGGTTTCTGGCCTACAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AGTGCCCCAATTTTCAGGTTGACTAAAACATGGGCGTTATTAAGTCGAAAAGACAAAACTACCTTTGAAAAATT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AGAATATGTAATGAGTAAAGAAGATAACTACAAAAGACTCAGAGACTATATAAGTAGCTTAAAGATGACACCTT  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GCATTCCCTATTTA-----GGTATCTATTTGTCAGATTTAACATACATCGATTCAGCATACCCATCAACTGGCA  661
                         |     |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  -------------ATGGGCGGTATCTATTTGTCAGATTTAACATACATCGATTCAGCATACCCATCAACTGGCA  61

Query  662  GCATTCTAGAAAATGAGCAAAGATCAAATTTAATGAATAATATCCTTCGAATAATTTCTGATTTACAGCAGTCT  735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   62  GCATTCTAGAAAATGAGCAAAGATCAAATTTAATGAATAATATCCTTCGAATAATTTCTGATTTACAGCAGTCT  135

Query  736  TGTGAATATGATATTCCCATGTTGCCTCATGTCCAAAAATATCTCAACTCTGTTCAGTATATAGAAGAACTACA  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  136  TGTGAATATGATATTCCCATGTTGCCTCATGTCCAAAAATATCTCAACTCTGTTCAGTATATAGAAGAACTACA  209

Query  810  AAAATTTGTGGAAGACGATAATTACAAGCTTTCATTAAAGATAGAACCAGGGACAAGCACCCCACGTTCTGCTG  883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  210  AAAATTTGTGGAAGACGATAATTACAAGCTTTCATTAAAGATAGAACCAGGGACAAGCACCCCACGTTCTGCTG  283

Query  884  CTTCCAGAGAAGATTTAGTAGGTCCTGAAGTAGGAGCGTCTCCACAGAGTGGACGAAAAAGTGTGGCAGCTGAA  957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  284  CTTCCAGAGAAGATTTAGTAGGTCCTGAAGTAGGAGCGTCTCCACAGAGTGGACGAAAAAGTGTGGCAGCTGAA  357

Query  958  GGAGCCTTGCTCCCACAGACACCGCCATCCCCTCGGAATCTGATTCCACATGGACATAGGAAGTGCCATAGTTT  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  358  GGAGCCTTGCTCCCACAGACACCGCCATCCCCTCGGAATCTGATTCCACATGGACATAGGAAGTGCCATAGTTT  431

Query 1032  GGGTTATAATTTCATTCATAAAATGAACACAGCAGAATTTAAGAGTGCAACGTTTCCAAATGCAGGACCAAGAC  1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  432  GGGTTATAATTTCATTCATAAAATGAACACAGCAGAATTTAAGAGTGCAACGTTTCCAAATGCAGGACCAAGAC  505

Query 1106  ATCTGTTAGATGATAGCGTCATGGAGCCCCATGCGCCATCTCGAGGCCAAGCTGAAAGTTCTACTCTTTCTAGT  1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  506  ATCTGTTAGATGATAGCGTCATGGAGCCCCATGCGCCATCTCGAGGCCAAGCTGAAAGTTCTACTCTTTCTAGT  579

Query 1180  GGAATATCAATAGGTAGCAGCGATGGTTCTGAACTAAGTGAAGAGACCTCATGGCCTGCTTTTGAAAGGAACAG  1253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct  580  GGAATATCAATAGGTAGCAGCGATGGTTCTGAACTAAGTGAAGAGACCTCATGGCCTGCTTTTGAA--------  645

Query 1254  ATTATACCATTCTCTCGGCCCGGTGACAAGAGTGGCACGAAATGGCTATCGAAGTCACATGAAGGCCAGCAGTT  1327
                                                                                  ||||
Sbjct  646  ----------------------------------------------------------------------AGTT  649

Query 1328  CTGCAGAATCAGAAGATTTGGCAGTACATTTATATCCAGGAGCTGTTACTATTCAAGGTGTTCTCAGGAGAAAA  1401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  650  CTGCAGAATCAGAAGATTTGGCAGTACATTTATATCCAGGAGCTGTTACTATTCAAGGTGTTCTCAGGAGAAAA  723

Query 1402  ACTTTGTTAAAAGAAGGCAAAAAGCCTACAGTAGCATCTTGGACAAAATATTGGGCAGCTTTGTGTGGGACACA  1475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  724  ACTTTGTTAAAAGAAGGCAAAAAGCCTACAGTAGCATCTTGGACAAAATATTGGGCAGCTTTGTGTGGGACACA  797

Query 1476  GCTTTTTTACTATGCTGCCAAATCTCTAAAGGCTACCGAAAGAAAACATTTCAAATCAACATCCAATAAGAACG  1549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  798  GCTTTTTTACTATGCTGCCAAATCTCTAAAGGCTACCGAAAGAAAACATTTCAAATCAACATCCAATAAGAACG  871

Query 1550  TATCTGTGATAGGATGGATGGTGATGATGGCTGATGACCCTGAACATCCTGATCTCTTCCTGCTGACTGACTCT  1623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  872  TATCTGTGATAGGATGGATGGTGATGATGGCTGATGACCCTGAACATCCTGATCTCTTCCTGCTGACTGACTCT  945

Query 1624  GAGAAAGGAAATTCGTACAAGTTTCAAGCTGGCAATAGAATGAATGCAATGTTATGGTTTAAGCATTTGAGTGC  1697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  946  GAGAAAGGAAATTCGTACAAGTTTCAAGCTGGCAATAGAATGAATGCAATGTTATGGTTTAAGCATTTGAGTGC  1019

Query 1698  AGCCTGCCAAAGTAACAAACAACAGGTTCCTACAAACTTGATGACTTTTGAG  1749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020  AGCCTGCCAAAGTAACAAACAACAGGTTCCTACAAACTTGATGACTTTTGAG  1071

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