Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03802
Subject:
NR_045000.1
Aligned Length:
1698
Identities:
868
Gaps:
706

Alignment

Query    1  ATGGCAGGCTCCCTGCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACAC  74
                                                        .|||.||.||||||||||.|||||||||||
Sbjct    1  --------------------------------------------ATATTCCGAGCTTGGCTATGCAGGCAACAC  30

Query   75  TGAGC---CCCAGTTCATTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAA  145
            |||||   |..||||.|.|||||.||||||.|||.|..||||||||||||||||||||||||||.||||.|||.
Sbjct   31  TGAGCCTGCATAGTTTACTATTCTTTCATGCATTTCTGTCAGAGAGTCAGCAAAGGTAGTTGACAAAGCCCAAG  104

Query  146  GGAGAGTGTTGAGGGGAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCT  219
            |||||.|||||||||||||||||||.|||||||||||||||...|||||||||||.||||||.||||.||||||
Sbjct  105  GGAGAATGTTGAGGGGAGTTGATGAGCTTGACTTTTTCATACAGGATGAAGCCATTGATAAATCTACGTATGCT  178

Query  220  ACAAAGTGGCCGATACGACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTT  293
            |||||||||.|.|||.||||||||.|||.|||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  179  ACAAAGTGGTCAATATGACATGGAGTCACTGAAGACTGGGATATTATGGAAAGGTTCATGGAGCAAGTGGTTTT  252

Query  294  TAAATATCTTCGAGCTGAACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACA  367
            ||||||| ||.||||.|||.|||||||||||||||||..|||||||||||.||||||.|||||||.||||||.|
Sbjct  253  TAAATAT-TTTGAGCAGAATCTGAGGACCATTATTTTGCAATGACAGAACTTCCACTGAATACACTAGAAAATA  325

Query  368  GAGAGTA-TCTTGCAGAAATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCT  440
            .|||..| |.|||||||||||||||||||||.||||||.|||||||||.||||||||||||||||||..||.||
Sbjct  326  CAGAACATTTTTGCAGAAATTATGTTTGAATTATTTAATGTACCAGGATTCTACATTGCAGTTCAGGAGGTACT  399

Query  441  GGCCTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAG  514
            .|||||||..|.||||||||||||||.|||||||||||||..||.|||||.|.|.|||||||||||||..||||
Sbjct  400  AGCCTTGGAAGTATCTTGGACATCTCAACAAGTGGGTGAATATATGTTAATGAGTATAGTCATTGACAAAGGAG  473

Query  515  ATGGAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCA  588
            ||||||||||||.||||.|||||||.|.||||||||||||||||||.|||||||||||.|||||||.|||||.|
Sbjct  474  ATGGAGTCACCCTTGTTCTCCCAGTTGTAGAAGGTTATGTAATTGGGAGCTGCATCAATCACATCCTGATTGTA  547

Query  589  GGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACT  662
            |||   ||||.|..|||||||||||||||.||.|||||||||||||||||.||||||||||.||||||||||||
Sbjct  548  GGT---GATACTGTGTATTTCATTCAACAACTACTAAGGGAGAGGGAGGTAGGAATCCCTCTTGAGCAGTCACT  618

Query  663  GGAGACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATG  736
            |||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||
Sbjct  619  GGAGACCACAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCTGATATAGTCAAGGAATTTGCTAAGTATG  692

Query  737  ATGTGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGAC  810
            |||||||||||.||||||||||||||||||||||.||||||||||.||||||||||.|||||||..|.|||||.
Sbjct  693  ATGTGGATCCCTGGAAGTGGATCAAACAGTACACAGGTATCAATGTGATCAACCAGGAGAAGTTCATAATAGAT  766

Query  811  GTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTC  884
            |||||||||.||||.||||||..||||||||||||.|||.||||.||||||||||||||||||||||||||.||
Sbjct  767  GTTGGTTACAAAAGGTTCCTGCAACCTGAAATATTTTTTTACCCAGAGTTTGCCAACCCAGACTTTATGGAATC  840

Query  885  CATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAG-------  951
            |.|||...||||||||||||    ||||||.|||||.|||||.|||||||...|.||.|||||||||       
Sbjct  841  CGTCTTGAATGTTGTTGATG----AATACAAAACTGTCCCATTGATGTGCATTGTCCACTGTATAAGAATGTTG  910

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct  911  TTCTTTCAAGGGGTTTGACCATATTCAGGGATTTGAATCTCAACTACAGAGAGATTTGAAGAGTGGTACATGCC  984

Query  952  --------------------------------------------------------------------------  951
                                                                                      
Sbjct  985  AGATTAAAACTCAGTAAGGAGCTCAGTGGCAGGAGAATCAAACCTAAGCTTACAGAGTTTCGGGTGGTAATCCA  1058

Query  952  ----------------------------------------------------CCCGAGTTCTTTCAGGTCTGCC  973
                                                                |..|||||.|||||||||||.|
Sbjct 1059  TCACATGCAGCACTATGCCTTATGGTTTGGAAGCTTAATGCTAGCCTCAACTCTGGAGTTATTTCAGGTCTGTC  1132

Query  974  ACACCAAGAAGGACTATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCC---  1044
            |||||||||||||||||.||||.||.||.|||||||||||||.|||.|.||...||||||||||.|||||.   
Sbjct 1133  ACACCAAGAAGGACTATAAAGAATATGGCCCCAGCATCTGCCACCAGAGCCTTCTCTTTGGAGTAATGTCTTAG  1206

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1207  TGTCTGCCTTGAAAGCATCATTTAATAGTGTCATGTTGGGGAACAAGTGTCCTTCAGAACCCAGAGAAGACTAC  1280

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1281  CATTTCTAAATGACATTTGGTGTTGACGTCTGAGCAGTATGCTTGCATCACCTAGTGCATGAGGCACAGGGCAG  1354

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1355  AGTCATTTCAGTAAAAGCCTGTCTTTATGTGTTGACTGCTGTATGCCCACTCCTCCTTCTCTCACTCCCTTTCT  1428

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1429  TCATGCTTCCCCGGTTTCCCTCCTCCTTTTAACTTCAACTTTTTTGTTGACAAATACCATTCTGAAGGAATTCA  1502

Query 1045  --------------------------------------------------------------------------  1044
                                                                                      
Sbjct 1503  AATGTGACTCTGAAAATTGTTAAGAGGAAAAAAAATTACAAAAATGGCCCAAAATAGTTCTCCCCCAGGAAAGA  1576

Query 1045  ----------------------------------------------------------------------  1044
                                                                                  
Sbjct 1577  ATGCAGTGGTATAAATCCTTTTCCCCCAGCCTATTTTTATAAATAAAACGTTATAAACTTAAAATACAAA  1646

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