Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03844
Subject:
XM_006497998.3
Aligned Length:
3239
Identities:
1508
Gaps:
1567

Alignment

Query    1  ATGGGCTCCAGGATCAAGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGACAGG  74
            ||||||||||||||||||||.||.||||||||.|||||||||||.|||||.||||||||.|||||.||||||||
Sbjct    1  ATGGGCTCCAGGATCAAGCAAAACCCAGAGACTACATTTGAAGTGTATGTGGAAGTGGCTTATCCTAGGACAGG  74

Query   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCAGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148

Query  149  TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG  222
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  149  TGACCAAGTTTTGTTTTCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTTGTG  222

Query  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCCAAGAGCTGCTTCTGTAT  296

Query  297  CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC  370
            |||||||||.||||||||||||||||||||.||||||||.|||||||||.||||||||||||||||.|||.|||
Sbjct  297  CTTAAGCTACCTCCCCTGGTTCGAGGTATTCTATAAGCTCCTTAACATCTTGGCAGATTACACGACGAAACGAC  370

Query  371  AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT  444
            ||||||.||||||||||||.|||||||||||||||||||.|||||||||||||||.||.|||||||||||.||.
Sbjct  371  AGGAAAGTCAGTGGAATGAACTTCTTGAAACTCTGCACAGACTTCCCATCCCTGATCCTGGAGTGTCTGTTCAC  444

Query  445  CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC  518
            |||||.|||||||||||.||.|||||||||||||.||||||.||||||||||||||||||||||||||||||||
Sbjct  445  CTCAGTGTGCATTCTTACTTCACTGTGCCTGATAGCAGAGAGCTTCCCAGCATACCTGAGAATAGAAATCTGAC  518

Query  519  AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC  592
            ||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||||||||.|
Sbjct  519  AGAATATTTTGTGGCTGTGGATGTGAACAACATGTTGCATCTGTACGCCAGCATGCTGTATGAACGCCGGATCC  592

Query  593  TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC  666
            |||||||.||||||||.|||||.||..||||.||||||||||||||.||.||.||.|||||||||||.||||||
Sbjct  593  TCATCATCTGCAGCAAGCTCAGTACATTGACGGCCTGCATCCACGGCTCAGCTGCCATGCTCTACCCTATGTAC  666

Query  667  TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  740
            ||||||||.|||||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGGCAGCATGTGTACATCCCTGTGCTGCCCCCACATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  740

Query  741  AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA  814
            |||||||||||||||||||||||||||.|||||.|||||||||||.||||||||.||||||.||||.|||||||
Sbjct  741  AGGAATCCATTTAAGTTTAATGGAGAAGGTCAGGAACATGGCCCTCGATGATGTTGTGATCTTGAACGTGGACA  814

Query  815  CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG  888
            |||||||||||||||||||.||.|||||||||||||||||||||||.||.||||||||.|||||||||||||||
Sbjct  815  CCAACACCCTGGAAACCCCTTTTGATGACCTCCAGAGCCTCCCAAATGATGTGATCTCCTCCCTGAAGAACAGG  888

Query  889  CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG  962
            |||||.||||||||.||||||||.||.|||||.|||||||||||.||||||||||||||||||||||||||.||
Sbjct  889  CTGAAGAAGGTCTCTACAACCACAGGTGATGGGGTGGCCAGAGCCTTCCTCAAGGCCCAGGCTGCTTTCTTTGG  962

Query  963  TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT  1036
            .||||||||.||.||.||||||||.|||||.||.||.||.|||||||||.|||||||||||||.||.|||||||
Sbjct  963  CAGCTACCGGAATGCACTGAAAATTGAGCCAGAAGAACCCATCACTTTCAGTGAGGAAGCCTTTGTATCCCACT  1036

Query 1037  ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT  1110
            |||||||.||||||||||..||||||||.|||||.|||||||||.||||||||||||||||||||||.|||||.
Sbjct 1037  ACCGCTCTGGAGCCATGAAACAGTTCCTACAGAATGCCACACAGTTGCAGCTCTTCAAGCAGTTTATCGATGGC  1110

Query 1111  CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC  1184
            |||.||||.||||||||||||||.|||||||||||.|||||.|||||.|||||||||||||||||.|||||.||
Sbjct 1111  CGACTAGACCTTCTCAATTCCGGTGAAGGTTTCAGCGATGTCTTTGAGGAGGAAATCAACATGGGAGAGTATGC  1184

Query 1185  TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA  1258
            .||||||||.||||||||||||||||||||.|||||.|||.|||||||||||||.||.||||||||||||||||
Sbjct 1185  CGGCAGTGATAAACTGTACCATCAGTGGCTGTCCACAGTCAGGAAAGGAAGTGGTGCGATTCTGAATACTGTAA  1258

Query 1259  AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG  1332
            |.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 1259  AAACAAAAGCTAACCCAGCCATGAAGACTGTCTACAAGTTTGCAAAAGATCATGCAAAAATGGGAATAAAGGAG  1332

Query 1333  GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA  1406
            |||||||||||||||||||||||||||||..|.|||||.|||||.|...||.|..|||||||.|..||||||||
Sbjct 1333  GTGAAAAACCGCTTGAAGCAAAAGGACATCACGGAGAACGGCTGTGTGTCCTCTGCAGAAGATCCACTGCCAAA  1406

Query 1407  GACTGCA--CCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCA  1478
            |||  ||  ||.|||||||.||..|||.||.|||||||||..||.||||||||||||.|.||||||||||||||
Sbjct 1407  GAC--CATGCCATCCCCACAGGCAGAGACCCAGGACCCCAGACTTCGAGAAGACCGGAGACCAATCACAGTCCA  1478

Query 1479  CTTTGGACAG---------------------------------------------------------GTGCGCC  1495
            ||||||.|||                                                         ||.||.|
Sbjct 1479  CTTTGGGCAGCAACAAAGACTTCATCCCACTCGGCCGCCGCCTCCCAAGATCCAGCGCTCAAGGCCCGTACGGC  1552

Query 1496  CACCTCGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGC  1569
            |.||||||||||||||.||.|.||||||.||||||||||||.|.|||||||||.|||||||.|||||..|.|||
Sbjct 1553  CTCCTCGTCCACATGTCGTCAGGAGACCCAAGAGCAACATCACTGTGGAAGGCAGGAGGACATCTGTCTCAAGC  1626

Query 1570  CCTGAGCA------AAACACCATTGCAACACCA-GCT--------------ACACTCCAC--AT--------CC  1612
            ||||||||      ||| .||.||||.||||.| |||              |.|||||.|  ||        ||
Sbjct 1627  CCTGAGCACCTGGTAAA-GCCCTTGCGACACTATGCTGTCTTCCTCTCTGAAGACTCCTCTGATGAGGAATGCC  1699

Query 1613  TAC----AGA-----------------------AAAGCATT-----------ACCCATTTTG--CGGCCA-AG-  1644
            .||    |||                       |||||.||           .|||  ||||  .||||| || 
Sbjct 1700  GACGGGAAGAGGCCCCCAGCACTGGCTTCACTGAAAGCCTTCTCTTCTCTGCTCCC--TTTGAATGGCCACAGC  1771

Query 1645  --TTCCCGA-------------------------------------CGAGAG---------GCT----------  1660
              |.||.||                                     ||||||         |||          
Sbjct 1772  CATACCGGACATTGAAAGAATCAGACAGCGCAGAAGGTGATGAGACCGAGAGTCCAGAGCAGCTAGTTCGAGAA  1845

Query 1661  ------GGACCT----CTTCATCACAT-----------------------------------------------  1677
                  ||||||    ||.|..|||.|                                               
Sbjct 1846  CCCTGGGGACCTACCCCTGCTCCACCTGACCGAGCTGCCAGCATTGACCTTCTAGAAGATGTCTTCAGCAGCCT  1919

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1920  AGACGTGGAGGCACCACTGCAGCCGCTGGGCCAAGCCAAGAGCCTGGAGGATCTCCGGGCCCCCAAAGACTTGC  1993

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1994  GGGAACAGCCAGGGAGCTTTGATTACCAGAGACTGGACCTGTGCAGAAGTGAGAGGGGCCTTAGCATGGCTGCA  2067

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2068  GCCTTGAAGCTTGCTCATCCATATACTAAGCTCTGGAGTCTGGGTCAGGACGACATGGCCATCCCCAGCAAGCC  2141

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2142  CTCCATAACCTCCCCTGAGAAGCCCTCAGCTCTGCTTGGTACTTCCCCAGCCCTGCCTCTCAGACCCCAGAACC  2215

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2216  AGGAGGGCATCCTGAGCCCCAGCATCAAGGAGGAGACTCCCATCCCAACTCCGGGCAGCATCACCATTCCCAGG  2289

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2290  CCACAAGGCAGAAAGACCCCTGAGCTGGGCATCGTGCCTCCACCACCCACTGCCCGGCCAGCCAAGCTCCAGGC  2363

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2364  TGCTGGCGGCCCACTTGGTGACTTCTCTTCAGAGCCACTGCAGATGGACCGGGAAAGACAAGCCGCTCTGAGTC  2437

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2438  CAGCCCTCCTGTCAGGGCTGCTCCCCAGAGCTGTCCCCCAAGGTCCCACAGAACTTCTGCAGCCACCCAGCCCA  2511

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2512  GCCCCAGGAGCTGCAGGCACAGGCAGCGATGCCCTGCTCGCTCTCCTGGATCCACTTAACACAGCCTGGTCAGG  2585

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2586  CAGCACCATCCCATCACATCCTGCTACCCCCAGTGCAGCCACCCCATTCATCCCTCAGCTCAGCTTCCCCCCAA  2659

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2660  CAGTGACACCCACCCCTTTTGTACAGACACCACTCAATCCCTTTGTCCCATCTGTGCCAGTAGTACCACCCTCC  2733

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2734  ATGCCCCTGAGCTCTACACCAGCCAGGCCTTTTGGGACCCCTCCAGCATCCCTAGGGCCAGCATATGCACCTAG  2807

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2808  CATTCTATTGTCTAGTTCTGGCTTCTATGCCCCTCACAGGTCTCAGCCCAACCTCTCTGCTCTCTCCATGCCCA  2881

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2882  ACCTCTTTGGCCAGATCCCAATGGGTGCCCACACTAGTCCCCTGCAGCCACTTGGCCCCCCAGCCGTTGCCCCC  2955

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2956  TCCAGGATCCGAACATTGCCTCTGGCCCGCTCAAGTGCCAGGGCTGCTGAGGCCAAGCAGGGGTTGGCCCTGAG  3029

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 3030  GCCTGGTGAATCCCCACTGTTGCCTCCCAGACCGCCCCAGAGCCTACAGCCAACCCCGCAGCCCTCTGTTCCTA  3103

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 3104  CACAGGCCAGAGACCCCTTTGAGGATTTGCTGCGAAAAACCAAGCAAGATGTGAGCCCAAGCCCAGCCCCGGCC  3177

Query 1678  ---------------------------------------------------------  1677
                                                                     
Sbjct 3178  CTGGCCCCAGCCTCCACCTCCGTGGAGCAGCTCCGCAGACAGTGGGAGACCTTTGAG  3234

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