Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03844
Subject:
XM_006498000.3
Aligned Length:
3239
Identities:
1435
Gaps:
1648

Alignment

Query    1  ATGGGCTCCAGGATCAAGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGACAGG  74
            ||||||||||||||||||||.||.||||||||.|||||||||||.|||||.||||||||.|||||.||||||||
Sbjct    1  ATGGGCTCCAGGATCAAGCAAAACCCAGAGACTACATTTGAAGTGTATGTGGAAGTGGCTTATCCTAGGACAGG  74

Query   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCAGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148

Query  149  TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG  222
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  149  TGACCAAGTTTTGTTTTCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTTGTG  222

Query  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCCAAGAGCTGCTTCTGTAT  296

Query  297  CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC  370
            |||||||||.||||||||||||||||||||.||||||||.|||||||||.||||||||||||||||.|||.|||
Sbjct  297  CTTAAGCTACCTCCCCTGGTTCGAGGTATTCTATAAGCTCCTTAACATCTTGGCAGATTACACGACGAAACGAC  370

Query  371  AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT  444
            |                                                                         
Sbjct  371  A-------------------------------------------------------------------------  371

Query  445  CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC  518
                    |||||||||.||.|||||||||||||.||||||.||||||||||||||||||||||||||||||||
Sbjct  372  --------GCATTCTTACTTCACTGTGCCTGATAGCAGAGAGCTTCCCAGCATACCTGAGAATAGAAATCTGAC  437

Query  519  AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC  592
            ||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||||||||.|
Sbjct  438  AGAATATTTTGTGGCTGTGGATGTGAACAACATGTTGCATCTGTACGCCAGCATGCTGTATGAACGCCGGATCC  511

Query  593  TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC  666
            |||||||.||||||||.|||||.||..||||.||||||||||||||.||.||.||.|||||||||||.||||||
Sbjct  512  TCATCATCTGCAGCAAGCTCAGTACATTGACGGCCTGCATCCACGGCTCAGCTGCCATGCTCTACCCTATGTAC  585

Query  667  TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  740
            ||||||||.|||||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  586  TGGCAGCATGTGTACATCCCTGTGCTGCCCCCACATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  659

Query  741  AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA  814
            |||||||||||||||||||||||||||.|||||.|||||||||||.||||||||.||||||.||||.|||||||
Sbjct  660  AGGAATCCATTTAAGTTTAATGGAGAAGGTCAGGAACATGGCCCTCGATGATGTTGTGATCTTGAACGTGGACA  733

Query  815  CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG  888
            |||||||||||||||||||.||.|||||||||||||||||||||||.||.||||||||.|||||||||||||||
Sbjct  734  CCAACACCCTGGAAACCCCTTTTGATGACCTCCAGAGCCTCCCAAATGATGTGATCTCCTCCCTGAAGAACAGG  807

Query  889  CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG  962
            |||||.||||||||.||||||||.||.|||||.|||||||||||.||||||||||||||||||||||||||.||
Sbjct  808  CTGAAGAAGGTCTCTACAACCACAGGTGATGGGGTGGCCAGAGCCTTCCTCAAGGCCCAGGCTGCTTTCTTTGG  881

Query  963  TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT  1036
            .||||||||.||.||.||||||||.|||||.||.||.||.|||||||||.|||||||||||||.||.|||||||
Sbjct  882  CAGCTACCGGAATGCACTGAAAATTGAGCCAGAAGAACCCATCACTTTCAGTGAGGAAGCCTTTGTATCCCACT  955

Query 1037  ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT  1110
            |||||||.||||||||||..||||||||.|||||.|||||||||.||||||||||||||||||||||.|||||.
Sbjct  956  ACCGCTCTGGAGCCATGAAACAGTTCCTACAGAATGCCACACAGTTGCAGCTCTTCAAGCAGTTTATCGATGGC  1029

Query 1111  CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC  1184
            |||.||||.||||||||||||||.|||||||||||.|||||.|||||.|||||||||||||||||.|||||.||
Sbjct 1030  CGACTAGACCTTCTCAATTCCGGTGAAGGTTTCAGCGATGTCTTTGAGGAGGAAATCAACATGGGAGAGTATGC  1103

Query 1185  TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA  1258
            .||||||||.||||||||||||||||||||.|||||.|||.|||||||||||||.||.||||||||||||||||
Sbjct 1104  CGGCAGTGATAAACTGTACCATCAGTGGCTGTCCACAGTCAGGAAAGGAAGTGGTGCGATTCTGAATACTGTAA  1177

Query 1259  AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG  1332
            |.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 1178  AAACAAAAGCTAACCCAGCCATGAAGACTGTCTACAAGTTTGCAAAAGATCATGCAAAAATGGGAATAAAGGAG  1251

Query 1333  GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA  1406
            |||||||||||||||||||||||||||||..|.|||||.|||||.|...||.|..|||||||.|..||||||||
Sbjct 1252  GTGAAAAACCGCTTGAAGCAAAAGGACATCACGGAGAACGGCTGTGTGTCCTCTGCAGAAGATCCACTGCCAAA  1325

Query 1407  GACTGCA--CCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCA  1478
            |||  ||  ||.|||||||.||..|||.||.|||||||||..||.||||||||||||.|.||||||||||||||
Sbjct 1326  GAC--CATGCCATCCCCACAGGCAGAGACCCAGGACCCCAGACTTCGAGAAGACCGGAGACCAATCACAGTCCA  1397

Query 1479  CTTTGGACAG---------------------------------------------------------GTGCGCC  1495
            ||||||.|||                                                         ||.||.|
Sbjct 1398  CTTTGGGCAGCAACAAAGACTTCATCCCACTCGGCCGCCGCCTCCCAAGATCCAGCGCTCAAGGCCCGTACGGC  1471

Query 1496  CACCTCGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGC  1569
            |.||||||||||||||.||.|.||||||.||||||||||||.|.|||||||||.|||||||.|||||..|.|||
Sbjct 1472  CTCCTCGTCCACATGTCGTCAGGAGACCCAAGAGCAACATCACTGTGGAAGGCAGGAGGACATCTGTCTCAAGC  1545

Query 1570  CCTGAGCA------AAACACCATTGCAACACCA-GCT--------------ACACTCCAC--AT--------CC  1612
            ||||||||      ||| .||.||||.||||.| |||              |.|||||.|  ||        ||
Sbjct 1546  CCTGAGCACCTGGTAAA-GCCCTTGCGACACTATGCTGTCTTCCTCTCTGAAGACTCCTCTGATGAGGAATGCC  1618

Query 1613  TAC----AGA-----------------------AAAGCATT-----------ACCCATTTTG--CGGCCA-AG-  1644
            .||    |||                       |||||.||           .|||  ||||  .||||| || 
Sbjct 1619  GACGGGAAGAGGCCCCCAGCACTGGCTTCACTGAAAGCCTTCTCTTCTCTGCTCCC--TTTGAATGGCCACAGC  1690

Query 1645  --TTCCCGA-------------------------------------CGAGAG---------GCT----------  1660
              |.||.||                                     ||||||         |||          
Sbjct 1691  CATACCGGACATTGAAAGAATCAGACAGCGCAGAAGGTGATGAGACCGAGAGTCCAGAGCAGCTAGTTCGAGAA  1764

Query 1661  ------GGACCT----CTTCATCACAT-----------------------------------------------  1677
                  ||||||    ||.|..|||.|                                               
Sbjct 1765  CCCTGGGGACCTACCCCTGCTCCACCTGACCGAGCTGCCAGCATTGACCTTCTAGAAGATGTCTTCAGCAGCCT  1838

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1839  AGACGTGGAGGCACCACTGCAGCCGCTGGGCCAAGCCAAGAGCCTGGAGGATCTCCGGGCCCCCAAAGACTTGC  1912

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1913  GGGAACAGCCAGGGAGCTTTGATTACCAGAGACTGGACCTGTGCAGAAGTGAGAGGGGCCTTAGCATGGCTGCA  1986

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1987  GCCTTGAAGCTTGCTCATCCATATACTAAGCTCTGGAGTCTGGGTCAGGACGACATGGCCATCCCCAGCAAGCC  2060

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2061  CTCCATAACCTCCCCTGAGAAGCCCTCAGCTCTGCTTGGTACTTCCCCAGCCCTGCCTCTCAGACCCCAGAACC  2134

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2135  AGGAGGGCATCCTGAGCCCCAGCATCAAGGAGGAGACTCCCATCCCAACTCCGGGCAGCATCACCATTCCCAGG  2208

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2209  CCACAAGGCAGAAAGACCCCTGAGCTGGGCATCGTGCCTCCACCACCCACTGCCCGGCCAGCCAAGCTCCAGGC  2282

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2283  TGCTGGCGGCCCACTTGGTGACTTCTCTTCAGAGCCACTGCAGATGGACCGGGAAAGACAAGCCGCTCTGAGTC  2356

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2357  CAGCCCTCCTGTCAGGGCTGCTCCCCAGAGCTGTCCCCCAAGGTCCCACAGAACTTCTGCAGCCACCCAGCCCA  2430

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2431  GCCCCAGGAGCTGCAGGCACAGGCAGCGATGCCCTGCTCGCTCTCCTGGATCCACTTAACACAGCCTGGTCAGG  2504

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2505  CAGCACCATCCCATCACATCCTGCTACCCCCAGTGCAGCCACCCCATTCATCCCTCAGCTCAGCTTCCCCCCAA  2578

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2579  CAGTGACACCCACCCCTTTTGTACAGACACCACTCAATCCCTTTGTCCCATCTGTGCCAGTAGTACCACCCTCC  2652

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2653  ATGCCCCTGAGCTCTACACCAGCCAGGCCTTTTGGGACCCCTCCAGCATCCCTAGGGCCAGCATATGCACCTAG  2726

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2727  CATTCTATTGTCTAGTTCTGGCTTCTATGCCCCTCACAGGTCTCAGCCCAACCTCTCTGCTCTCTCCATGCCCA  2800

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2801  ACCTCTTTGGCCAGATCCCAATGGGTGCCCACACTAGTCCCCTGCAGCCACTTGGCCCCCCAGCCGTTGCCCCC  2874

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2875  TCCAGGATCCGAACATTGCCTCTGGCCCGCTCAAGTGCCAGGGCTGCTGAGGCCAAGCAGGGGTTGGCCCTGAG  2948

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2949  GCCTGGTGAATCCCCACTGTTGCCTCCCAGACCGCCCCAGAGCCTACAGCCAACCCCGCAGCCCTCTGTTCCTA  3022

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 3023  CACAGGCCAGAGACCCCTTTGAGGATTTGCTGCGAAAAACCAAGCAAGATGTGAGCCCAAGCCCAGCCCCGGCC  3096

Query 1678  ---------------------------------------------------------  1677
                                                                     
Sbjct 3097  CTGGCCCCAGCCTCCACCTCCGTGGAGCAGCTCCGCAGACAGTGGGAGACCTTTGAG  3153

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