Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03844
Subject:
XM_006498003.2
Aligned Length:
3124
Identities:
1488
Gaps:
1466

Alignment

Query    1  ATGGGCTCCAGGATCAAGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGACAGG  74
            ||||||||||||||||||||.||.||||||||.|||||||||||.|||||.||||||||.|||||.||||||||
Sbjct    1  ATGGGCTCCAGGATCAAGCAAAACCCAGAGACTACATTTGAAGTGTATGTGGAAGTGGCTTATCCTAGGACAGG  74

Query   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCAGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148

Query  149  TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG  222
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  149  TGACCAAGTTTTGTTTTCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTTGTG  222

Query  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCCAAGAGCTGCTTCTGTAT  296

Query  297  CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC  370
            |||||||||.||||||||||||||||||||.||||||||.|||||||||.||||||||||||||||.|||.|||
Sbjct  297  CTTAAGCTACCTCCCCTGGTTCGAGGTATTCTATAAGCTCCTTAACATCTTGGCAGATTACACGACGAAACGAC  370

Query  371  AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT  444
            ||||||.||||||||||||.|||||||||||||||||||.|||||||||||||||.||.|||||||||||.||.
Sbjct  371  AGGAAAGTCAGTGGAATGAACTTCTTGAAACTCTGCACAGACTTCCCATCCCTGATCCTGGAGTGTCTGTTCAC  444

Query  445  CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC  518
            |||||.|||||||||||.||.|||||||||||||.||||||.||||||||||||||||||||||||||||||||
Sbjct  445  CTCAGTGTGCATTCTTACTTCACTGTGCCTGATAGCAGAGAGCTTCCCAGCATACCTGAGAATAGAAATCTGAC  518

Query  519  AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC  592
            ||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||||||||.|
Sbjct  519  AGAATATTTTGTGGCTGTGGATGTGAACAACATGTTGCATCTGTACGCCAGCATGCTGTATGAACGCCGGATCC  592

Query  593  TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC  666
            |||||||.||||||||.|||||.||..||||.||||||||||||||.||.||.||.|||||||||||.||||||
Sbjct  593  TCATCATCTGCAGCAAGCTCAGTACATTGACGGCCTGCATCCACGGCTCAGCTGCCATGCTCTACCCTATGTAC  666

Query  667  TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  740
            ||||||||.|||||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGGCAGCATGTGTACATCCCTGTGCTGCCCCCACATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  740

Query  741  AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA  814
            |||||||||||||||||||||||||||.|||||.|||||||||||.||||||||.||||||.||||.|||||||
Sbjct  741  AGGAATCCATTTAAGTTTAATGGAGAAGGTCAGGAACATGGCCCTCGATGATGTTGTGATCTTGAACGTGGACA  814

Query  815  CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG  888
            |||||||||||||||||||.||.|||||||||||||||||||||||.||.||||||||.|||||||||||||||
Sbjct  815  CCAACACCCTGGAAACCCCTTTTGATGACCTCCAGAGCCTCCCAAATGATGTGATCTCCTCCCTGAAGAACAGG  888

Query  889  CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG  962
            |||||.||||||||.||||||||.||.|||||.|||||||||||.||||||||||||||||||||||||||.||
Sbjct  889  CTGAAGAAGGTCTCTACAACCACAGGTGATGGGGTGGCCAGAGCCTTCCTCAAGGCCCAGGCTGCTTTCTTTGG  962

Query  963  TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT  1036
            .||||||||.||.||.||||||||.|||||.||.||.||.|||||||||.|||||||||||||.||.|||||||
Sbjct  963  CAGCTACCGGAATGCACTGAAAATTGAGCCAGAAGAACCCATCACTTTCAGTGAGGAAGCCTTTGTATCCCACT  1036

Query 1037  ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT  1110
            |||||||.||||||||||..||||||||.|||||.|||||||||.||||||||||||||||||||||.|||||.
Sbjct 1037  ACCGCTCTGGAGCCATGAAACAGTTCCTACAGAATGCCACACAGTTGCAGCTCTTCAAGCAGTTTATCGATGGC  1110

Query 1111  CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC  1184
            |||.||||.||||||||||||||.|||||||||||.|||||.|||||.|||||||||||||||||.|||||.||
Sbjct 1111  CGACTAGACCTTCTCAATTCCGGTGAAGGTTTCAGCGATGTCTTTGAGGAGGAAATCAACATGGGAGAGTATGC  1184

Query 1185  TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA  1258
            .||||||||.||||||||||||||||||||.|||||.|||.|||||||||||||.||.||||||||||||||||
Sbjct 1185  CGGCAGTGATAAACTGTACCATCAGTGGCTGTCCACAGTCAGGAAAGGAAGTGGTGCGATTCTGAATACTGTAA  1258

Query 1259  AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG  1332
            |.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 1259  AAACAAAAGCTAACCCAGCCATGAAGACTGTCTACAAGTTTGCAAAAGATCATGCAAAAATGGGAATAAAGGAG  1332

Query 1333  GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA  1406
            |||||||||||||||||||||||||||||..|.|||||.|||||.|...||.|..|||||||.|..||||||||
Sbjct 1333  GTGAAAAACCGCTTGAAGCAAAAGGACATCACGGAGAACGGCTGTGTGTCCTCTGCAGAAGATCCACTGCCAAA  1406

Query 1407  GACTGCA--CCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCA  1478
            |||  ||  ||.|||||||.||..|||.||.|||||||||..||.||||||||||||.|.||||||||||||||
Sbjct 1407  GAC--CATGCCATCCCCACAGGCAGAGACCCAGGACCCCAGACTTCGAGAAGACCGGAGACCAATCACAGTCCA  1478

Query 1479  CTTTGGACAG---------------------------------------------------------GTGCGCC  1495
            ||||||.|||                                                         ||.||.|
Sbjct 1479  CTTTGGGCAGCAACAAAGACTTCATCCCACTCGGCCGCCGCCTCCCAAGATCCAGCGCTCAAGGCCCGTACGGC  1552

Query 1496  CACCTCGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGC  1569
            |.||||||||||||||.||.|.||||||.||||||||||||.|.|||||||||.|||||||.|||||..|.|||
Sbjct 1553  CTCCTCGTCCACATGTCGTCAGGAGACCCAAGAGCAACATCACTGTGGAAGGCAGGAGGACATCTGTCTCAAGC  1626

Query 1570  CCTGAGCAAAACACCATTGCAACACCAGCTACACTCCA--CATCCTACAG---AAAAG--CAT--TACCCATTT  1634
            ||||||||    .|||..||.|.|||.|  |||.|..|  .|||..||||   |.|||  .||  .|||.|   
Sbjct 1627  CCTGAGCA----GCCACAGCCATACCGG--ACATTGAAAGAATCAGACAGCGCAGAAGGTGATGAGACCGA---  1691

Query 1635  TGCGGCCA--------AGTTCCCGACGAGA-----GGCTGGACCT----CTTCATCACAT--------------  1677
             |.|.|||        ||||     |||||     ||  ||||||    ||.|..|||.|              
Sbjct 1692  -GAGTCCAGAGCAGCTAGTT-----CGAGAACCCTGG--GGACCTACCCCTGCTCCACCTGACCGAGCTGCCAG  1757

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1758  CATTGACCTTCTAGAAGATGTCTTCAGCAGCCTAGACGTGGAGGCACCACTGCAGCCGCTGGGCCAAGCCAAGA  1831

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1832  GCCTGGAGGATCTCCGGGCCCCCAAAGACTTGCGGGAACAGCCAGGGAGCTTTGATTACCAGAGACTGGACCTG  1905

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1906  TGCAGAAGTGAGAGGGGCCTTAGCATGGCTGCAGCCTTGAAGCTTGCTCATCCATATACTAAGCTCTGGAGTCT  1979

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1980  GGGTCAGGACGACATGGCCATCCCCAGCAAGCCCTCCATAACCTCCCCTGAGAAGCCCTCAGCTCTGCTTGGTA  2053

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2054  CTTCCCCAGCCCTGCCTCTCAGACCCCAGAACCAGGAGGGCATCCTGAGCCCCAGCATCAAGGAGGAGACTCCC  2127

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2128  ATCCCAACTCCGGGCAGCATCACCATTCCCAGGCCACAAGGCAGAAAGACCCCTGAGCTGGGCATCGTGCCTCC  2201

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2202  ACCACCCACTGCCCGGCCAGCCAAGCTCCAGGCTGCTGGCGGCCCACTTGGTGACTTCTCTTCAGAGCCACTGC  2275

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2276  AGATGGACCGGGAAAGACAAGCCGCTCTGAGTCCAGCCCTCCTGTCAGGGCTGCTCCCCAGAGCTGTCCCCCAA  2349

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2350  GGTCCCACAGAACTTCTGCAGCCACCCAGCCCAGCCCCAGGAGCTGCAGGCACAGGCAGCGATGCCCTGCTCGC  2423

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2424  TCTCCTGGATCCACTTAACACAGCCTGGTCAGGCAGCACCATCCCATCACATCCTGCTACCCCCAGTGCAGCCA  2497

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2498  CCCCATTCATCCCTCAGCTCAGCTTCCCCCCAACAGTGACACCCACCCCTTTTGTACAGACACCACTCAATCCC  2571

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2572  TTTGTCCCATCTGTGCCAGTAGTACCACCCTCCATGCCCCTGAGCTCTACACCAGCCAGGCCTTTTGGGACCCC  2645

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2646  TCCAGCATCCCTAGGGCCAGCATATGCACCTAGCATTCTATTGTCTAGTTCTGGCTTCTATGCCCCTCACAGGT  2719

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2720  CTCAGCCCAACCTCTCTGCTCTCTCCATGCCCAACCTCTTTGGCCAGATCCCAATGGGTGCCCACACTAGTCCC  2793

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2794  CTGCAGCCACTTGGCCCCCCAGCCGTTGCCCCCTCCAGGATCCGAACATTGCCTCTGGCCCGCTCAAGTGCCAG  2867

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2868  GGCTGCTGAGGCCAAGCAGGGGTTGGCCCTGAGGCCTGGTGAATCCCCACTGTTGCCTCCCAGACCGCCCCAGA  2941

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2942  GCCTACAGCCAACCCCGCAGCCCTCTGTTCCTACACAGGCCAGAGACCCCTTTGAGGATTTGCTGCGAAAAACC  3015

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 3016  AAGCAAGATGTGAGCCCAAGCCCAGCCCCGGCCCTGGCCCCAGCCTCCACCTCCGTGGAGCAGCTCCGCAGACA  3089

Query 1678  ----------------  1677
                            
Sbjct 3090  GTGGGAGACCTTTGAG  3105

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