Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03844
Subject:
XM_024447621.1
Aligned Length:
3229
Identities:
1546
Gaps:
1667

Alignment

Query    1  ATGGGCTCCAGGATCAAGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGACAGG  74
                                                          ||||||||||||||||||||||||||||
Sbjct    1  ----------------------------------------------ATGTTGAAGTGGCCTATCCCAGGACAGG  28

Query   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct   29  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGAC-------------------  83

Query  149  TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG  222
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct   84  -------------------------------CAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG  126

Query  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  127  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT  200

Query  297  CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  201  CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC  274

Query  371  AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  275  AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT  348

Query  445  CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  349  CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC  422

Query  519  AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  423  AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC  496

Query  593  TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  497  TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC  570

Query  667  TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  571  TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  644

Query  741  AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  645  AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA  718

Query  815  CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  719  CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG  792

Query  889  CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG  866

Query  963  TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  867  TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT  940

Query 1037  ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  941  ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT  1014

Query 1111  CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC  1088

Query 1185  TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089  TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA  1162

Query 1259  AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163  AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG  1236

Query 1333  GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237  GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA  1310

Query 1407  GACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCACT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311  GACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCACT  1384

Query 1481  TTGGACAG------------------------------------------------------GTGCGCCCACCT  1500
            ||||||||                                                      ||||||||||||
Sbjct 1385  TTGGACAGCTGCAGAGACTGCGTCCCACCCGACCGCCTCCCAAGATACAGCGCTCGAGGCCCGTGCGCCCACCT  1458

Query 1501  CGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGCCCTGA  1574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1459  CGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGCCCTGA  1532

Query 1575  GCA------AAACACCATTGCAACACCA-GC-----TACACTCC----ACATCCTACAGA-----AAAGCATTA  1627
            |||      ||| .||.||||.||||.| ||     |.|.||||    || |||| |.||     ||.|     
Sbjct 1533  GCACCTGGTAAA-GCCCTTGCGACACTATGCGGTCTTCCTCTCCGAAGAC-TCCT-CTGATGATGAATG-----  1598

Query 1628  CCCATTTTGCGGCCA-AGTTCCCGA-------------CGAGAGGCTGGACCTCTTCATCAC------------  1675
             |||    ||||..| ||..|||||             ||||||      |.|.|||.||.|            
Sbjct 1599  -CCA----GCGGGAAGAGGGCCCGAGCTCTGGCTTCACCGAGAG------CTTTTTCTTCTCCGCTCCCTTTGA  1661

Query 1676  AT------------------------------------------------------------------------  1677
            ||                                                                        
Sbjct 1662  ATGGCCGCAGCCGTATCGGACACTCAGGGAGTCAGACAGCGCGGAAGGCGACGAGGCAGAGAGTCCAGAGCAGC  1735

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1736  AAGTGCGGAAGTCCACAGGCCCTGTCCCAGCTCCCCCTGACCGGGCTGCCAGCATCGACCTTCTGGAAGACGTC  1809

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1810  TTCAGCAACCTGGACATGGAGGCCGCACTGCAGCCACTGGGCCAGGCCAAGAGCTTAGAGGACCTTCGTGCCCC  1883

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1884  CAAAGACCTGAGGGAGCAGCCAGGGACCTTTGACTATCAGAGGCTGGATCTGGGCGGGAGTGAGAGGAGCCGCG  1957

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1958  GGGTGACAGTGGCCTTGAAGCTTACCCACCCGTACAACAAGCTCTGGAGCCTGGGCCAGGACGACATGGCCATC  2031

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2032  CCCAGCAAGCCCCCAGCTGCCTCCCCTGAGAAGCCCTCAGCCCTGCTCGGAAACTCCCTGGCCCTGCCTCGAAG  2105

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2106  GCCCCAGAACCGGGACAGCATCCTGAACCCCAGTGACAAGGAGGAGGTGCCCACCCCTACTCTGGGCAGCATCA  2179

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2180  CCATCCCCCGGCCCCAAGGCAGGAAGACCCCAGAGCTGGGCATCGTGCCTCCACCGCCCATTCCCCGCCCGGCC  2253

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2254  AAGCTCCAGGCTGCCGGCGCCGCACTTGGTGACGTCTCAGAGCGGCTGCAGACGGATCGGGACAGGCGAGCTGC  2327

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2328  CCTGAGTCCAGGGCTCCTGCCTGGTGTTGTCCCCCAAGGCCCCACTGAACTGCTCCAGCCGCTCAGCCCTGGCC  2401

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2402  CCGGGGCTGCAGGCACGAGCAGTGACGCCCTGCTCGCCCTCCTGGACCCGCTCAGCACAGCCTGGTCAGGCAGC  2475

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2476  ACCCTCCCGTCACGCCCCGCCACCCCGAATGTAGCCACCCCATTCACCCCCCAATTCAGCTTCCCCCCTGCAGG  2549

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2550  GACACCCACCCCATTCCCACAGCCACCACTCAACCCCTTTGTCCCATCCATGCCAGCAGCCCCACCCACCCTGC  2623

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2624  CCCTGGTCTCCACACCAGCCGGGCCTTTCGGGGCCCCTCCAGCTTCCCTGGGGCCGGCTTTTGCGTCCGGCCTC  2697

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2698  CTGCTGTCCAGTGCTGGCTTCTGTGCCCCTCACAGGTCTCAGCCCAACCTCTCCGCCCTCTCCATGCCCAACCT  2771

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2772  CTTTGGCCAGATGCCCATGGGCACCCACACGAGCCCCCTACAGCCGCTGGGTCCCCCAGCAGTTGCCCCGTCGA  2845

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2846  GGATCCGAACGTTGCCCCTGGCCCGCTCAAGTGCCAGGGCTGCTGAGACCAAGCAGGGGCTGGCCCTGAGGCCT  2919

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2920  GGAGACCCCCCGCTTCTGCCTCCCAGGCCCCCTCAAGGCCTGGAGCCAACACTGCAGCCCTCTGCTCCTCAACA  2993

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2994  GGCCAGAGACCCCTTTGAGGATTTGTTACAGAAAACCAAGCAAGACGTGAGCCCGAGTCCGGCCCTGGCCCCGG  3067

Query 1678  -----------------------------------------------  1677
                                                           
Sbjct 3068  CCCCAGACTCGGTGGAGCAGCTCAGGAAGCAGTGGGAGACCTTCGAG  3114

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