Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03844
Subject:
XM_024447622.1
Aligned Length:
3229
Identities:
1552
Gaps:
1661

Alignment

Query    1  ATGGGCTCCAGGATCAAGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGACAGG  74
                                                          ||||||||||||||||||||||||||||
Sbjct    1  ----------------------------------------------ATGTTGAAGTGGCCTATCCCAGGACAGG  28

Query   75  TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGACTT  148
            |||||||||||                                            |||||||||||||||||||
Sbjct   29  TGGCACTCTTT--------------------------------------------CAGGAAGTTCTACAGACTT  58

Query  149  TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   59  TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG  132

Query  223  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT  206

Query  297  CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  207  CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC  280

Query  371  AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  281  AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT  354

Query  445  CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  355  CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC  428

Query  519  AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  429  AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC  502

Query  593  TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  503  TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC  576

Query  667  TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  577  TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT  650

Query  741  AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  651  AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA  724

Query  815  CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  725  CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG  798

Query  889  CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  799  CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG  872

Query  963  TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  873  TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT  946

Query 1037  ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  947  ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT  1020

Query 1111  CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021  CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC  1094

Query 1185  TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095  TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA  1168

Query 1259  AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169  AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG  1242

Query 1333  GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1243  GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA  1316

Query 1407  GACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCACT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317  GACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCACT  1390

Query 1481  TTGGACAG------------------------------------------------------GTGCGCCCACCT  1500
            ||||||||                                                      ||||||||||||
Sbjct 1391  TTGGACAGCTGCAGAGACTGCGTCCCACCCGACCGCCTCCCAAGATACAGCGCTCGAGGCCCGTGCGCCCACCT  1464

Query 1501  CGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGCCCTGA  1574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1465  CGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGCCCTGA  1538

Query 1575  GCA------AAACACCATTGCAACACCA-GC-----TACACTCC----ACATCCTACAGA-----AAAGCATTA  1627
            |||      ||| .||.||||.||||.| ||     |.|.||||    || |||| |.||     ||.|     
Sbjct 1539  GCACCTGGTAAA-GCCCTTGCGACACTATGCGGTCTTCCTCTCCGAAGAC-TCCT-CTGATGATGAATG-----  1604

Query 1628  CCCATTTTGCGGCCA-AGTTCCCGA-------------CGAGAGGCTGGACCTCTTCATCAC------------  1675
             |||    ||||..| ||..|||||             ||||||      |.|.|||.||.|            
Sbjct 1605  -CCA----GCGGGAAGAGGGCCCGAGCTCTGGCTTCACCGAGAG------CTTTTTCTTCTCCGCTCCCTTTGA  1667

Query 1676  AT------------------------------------------------------------------------  1677
            ||                                                                        
Sbjct 1668  ATGGCCGCAGCCGTATCGGACACTCAGGGAGTCAGACAGCGCGGAAGGCGACGAGGCAGAGAGTCCAGAGCAGC  1741

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1742  AAGTGCGGAAGTCCACAGGCCCTGTCCCAGCTCCCCCTGACCGGGCTGCCAGCATCGACCTTCTGGAAGACGTC  1815

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1816  TTCAGCAACCTGGACATGGAGGCCGCACTGCAGCCACTGGGCCAGGCCAAGAGCTTAGAGGACCTTCGTGCCCC  1889

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1890  CAAAGACCTGAGGGAGCAGCCAGGGACCTTTGACTATCAGAGGCTGGATCTGGGCGGGAGTGAGAGGAGCCGCG  1963

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 1964  GGGTGACAGTGGCCTTGAAGCTTACCCACCCGTACAACAAGCTCTGGAGCCTGGGCCAGGACGACATGGCCATC  2037

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2038  CCCAGCAAGCCCCCAGCTGCCTCCCCTGAGAAGCCCTCAGCCCTGCTCGGAAACTCCCTGGCCCTGCCTCGAAG  2111

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2112  GCCCCAGAACCGGGACAGCATCCTGAACCCCAGTGACAAGGAGGAGGTGCCCACCCCTACTCTGGGCAGCATCA  2185

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2186  CCATCCCCCGGCCCCAAGGCAGGAAGACCCCAGAGCTGGGCATCGTGCCTCCACCGCCCATTCCCCGCCCGGCC  2259

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2260  AAGCTCCAGGCTGCCGGCGCCGCACTTGGTGACGTCTCAGAGCGGCTGCAGACGGATCGGGACAGGCGAGCTGC  2333

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2334  CCTGAGTCCAGGGCTCCTGCCTGGTGTTGTCCCCCAAGGCCCCACTGAACTGCTCCAGCCGCTCAGCCCTGGCC  2407

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2408  CCGGGGCTGCAGGCACGAGCAGTGACGCCCTGCTCGCCCTCCTGGACCCGCTCAGCACAGCCTGGTCAGGCAGC  2481

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2482  ACCCTCCCGTCACGCCCCGCCACCCCGAATGTAGCCACCCCATTCACCCCCCAATTCAGCTTCCCCCCTGCAGG  2555

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2556  GACACCCACCCCATTCCCACAGCCACCACTCAACCCCTTTGTCCCATCCATGCCAGCAGCCCCACCCACCCTGC  2629

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2630  CCCTGGTCTCCACACCAGCCGGGCCTTTCGGGGCCCCTCCAGCTTCCCTGGGGCCGGCTTTTGCGTCCGGCCTC  2703

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2704  CTGCTGTCCAGTGCTGGCTTCTGTGCCCCTCACAGGTCTCAGCCCAACCTCTCCGCCCTCTCCATGCCCAACCT  2777

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2778  CTTTGGCCAGATGCCCATGGGCACCCACACGAGCCCCCTACAGCCGCTGGGTCCCCCAGCAGTTGCCCCGTCGA  2851

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2852  GGATCCGAACGTTGCCCCTGGCCCGCTCAAGTGCCAGGGCTGCTGAGACCAAGCAGGGGCTGGCCCTGAGGCCT  2925

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2926  GGAGACCCCCCGCTTCTGCCTCCCAGGCCCCCTCAAGGCCTGGAGCCAACACTGCAGCCCTCTGCTCCTCAACA  2999

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 3000  GGCCAGAGACCCCTTTGAGGATTTGTTACAGAAAACCAAGCAAGACGTGAGCCCGAGTCCGGCCCTGGCCCCGG  3073

Query 1678  -----------------------------------------------  1677
                                                           
Sbjct 3074  CCCCAGACTCGGTGGAGCAGCTCAGGAAGCAGTGGGAGACCTTCGAG  3120

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