Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03929
Subject:
NM_001168333.1
Aligned Length:
1415
Identities:
1197
Gaps:
31

Alignment

Query    1  ATGTGGCGATGTCCACTGGGGCTACTGCTGTTGCTGCCGCTGGCTGGCCACTTGGCT---CTGGGTGCCCAGCA  71
            ||||||.|||||...||||||   |||||.|||||||.||||||||||||   ||||   ||||..||||.||.
Sbjct    1  ATGTGGGGATGTTGGCTGGGG---CTGCTCTTGCTGCTGCTGGCTGGCCA---GGCTGCCCTGGAGGCCCGGCG  68

Query   72  GGGTCGTGGGCGCCGGGAGCTAGCACCGGGTCTGCACCTGCGGGGCATCCGGGACGCGGGAGGCCGGTACTGCC  145
            |.|||||.|||||.|||||||.||.||.||.||||||||||||||||||||||||||.||.|||.|.|||||||
Sbjct   69  GAGTCGTTGGCGCAGGGAGCTGGCGCCAGGGCTGCACCTGCGGGGCATCCGGGACGCCGGTGGCAGATACTGCC  142

Query  146  AGGAGCAGGACCTGTGCTGCCGCGGCCGTGCCGACGACTGTGCCCTGCCCTACCTGGGCGCCATCTGTTACTGT  219
            |.|||||||||.|||||||.||.||||||||.|||||.||||||||||||||||||||.||||.||||||||||
Sbjct  143  AAGAGCAGGACATGTGCTGTCGAGGCCGTGCTGACGAGTGTGCCCTGCCCTACCTGGGAGCCACCTGTTACTGT  216

Query  220  GACCTCTTCTGCAACCGCACGGTCTCCGACTGCTGCCCTGACTTCTGGGACTTCTGCCTCGGCGTGCCACCCCC  293
            ||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||..|.||||||||
Sbjct  217  GACCTCTTCTGCAACCGCACCGTCTCTGACTGCTGCCCCGACTTCTGGGACTTCTGCCTCGGGATTCCACCCCC  290

Query  294  TTTTCC-CCCGATCCAAGGATGTATGCATGGAGGTCGTATCTATCCAGTCTTGGGAACGTACTGGGACAACTGT  366
            .||.|| |||| |||||||.||.||||||||.||.||.|||||.||||||||.|||||.||||||||||||||.
Sbjct  291  CTTCCCTCCCG-TCCAAGGGTGCATGCATGGGGGCCGGATCTACCCAGTCTTCGGAACCTACTGGGACAACTGC  363

Query  367  AACCGTTGCACCTGCCA----GGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACA  436
            ||.||.|||||||||||    ||||    ||||.|||.||||.|||||.||.||.||.||.|||||.|||||||
Sbjct  364  AATCGATGCACCTGCCATGAGGGAG----GGCATTGGGAGTGCGACCAGGAGCCGTGTCTAGTGGACCCAGACA  433

Query  437  TGATCAAAGCCATCAACCAGGGCAACTATGGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTG  510
            ||||.|||||||||||||..||||||||.||.||||||||||||||||||||.|||||||||||||||||||||
Sbjct  434  TGATTAAAGCCATCAACCGAGGCAACTACGGGTGGCAGGCTGGGAACCACAGTGCCTTCTGGGGCATGACCCTG  507

Query  511  GATGAGGGCATTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATGAACATGCATGAAATTTATAC  584
            |||||||||||||||||||||||||||||.|||||||||||.|||.|.||||||||.|||.||||.||||||||
Sbjct  508  GATGAGGGCATTCGCTACCGCCTGGGCACAATCCGCCCATCCTCCACTGTCATGAATATGAATGAGATTTATAC  581

Query  585  AGTGCTGAACCCAGGGGAGGTGCTTCCCACAGCCTTCGAGGCCTCTGAGAAGTGGCCCAACCTGATTCATGAGC  658
            .||||||..||.||||||.|||||.|||||.|||||.||.||.||.||||||||||||||||||||.||.||||
Sbjct  582  GGTGCTGGGCCAAGGGGAAGTGCTACCCACTGCCTTTGAAGCTTCAGAGAAGTGGCCCAACCTGATCCACGAGC  655

Query  659  CTCTTGACCAAGGCAACTGTGCAGGCTCCTGGGCCTTCTCCACAGCAGCTGTGGCATCCGATCGTGTCTCAATC  732
            |..|.|||||.|||||.||||||||.||||||||.|||||||||||||||||.|||||.|||||.|||||.|||
Sbjct  656  CATTGGACCAGGGCAATTGTGCAGGTTCCTGGGCTTTCTCCACAGCAGCTGTCGCATCTGATCGCGTCTCTATC  729

Query  733  CATTCTCTGGGACACATGACGCCTGTCCTGTCGCCCCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGG  806
            ||||||.|||||||||||||.||..||||.||.||.||.|||||||||||.|||||.||||||||.||||||||
Sbjct  730  CATTCTTTGGGACACATGACACCCATCCTATCACCGCAAAACCTGCTGTCCTGTGATACCCACCACCAGCAGGG  803

Query  807  CTGCCGCGGTGGGCGTCTCGATGGTGCCTGGTGGTTCCTGCGTCGCCGAGGGGTGGTGTCTGACCACTGCTACC  880
            ||||||.|||||||||||.|||||.||.||||||||||||||.|||||.|||||||||||||||.||||.||||
Sbjct  804  CTGCCGAGGTGGGCGTCTTGATGGCGCTTGGTGGTTCCTGCGGCGCCGCGGGGTGGTGTCTGACAACTGTTACC  877

Query  881  CCTTCTCGGGCCGTGAACGAG-ACGAGGCTGGCCCTGCGCCCCCCTGTATGATGCACAGCCGAGCCATGGGTCG  953
            |.|||||.||||||||.| || |||||||..||||..|.||.|..|||||||||||||||||.||||||||.||
Sbjct  878  CATTCTCCGGCCGTGAGC-AGAACGAGGCCAGCCCCACTCCTCGTTGTATGATGCACAGCCGCGCCATGGGGCG  950

Query  954  GGGCAAGCGCCAGGCCACTGCCCACTGCCCCAA----CAGCTATGTTAATAACAATGACATCTACCAGGTCACT  1023
            ||||||||||||.||||||.|||.|||||||||    |||    |||.||..|||.|||||||||||||||||.
Sbjct  951  GGGCAAGCGCCAAGCCACTTCCCGCTGCCCCAATGGTCAG----GTTGATTCCAACGACATCTACCAGGTCACG  1020

Query 1024  CCTGTCTACCGCCTCGGCTCCAACGACAAGGAGATCATGAAGGAGCTGATGGAGAATGGCCCTGTCCAAGCCCT  1097
            ||||.|||||||||.|||||..|.||.||||||||||||||||||||.|||||.||.||||||||.|||||.||
Sbjct 1021  CCTGCCTACCGCCTGGGCTCTGATGAGAAGGAGATCATGAAGGAGCTAATGGAAAACGGCCCTGTTCAAGCACT  1094

Query 1098  CATGGAGGTGCATGAGGACTTCTTCCTATACAAGGGAGGCATCTACAGCCACACGCCAGTGAGCCTTGGGAGGC  1171
            ||||||.||.||.||||||||||||.|.|||.||.|.|||||||||||||||||.||.||.||||..|||||||
Sbjct 1095  CATGGAAGTACACGAGGACTTCTTCTTGTACCAGCGTGGCATCTACAGCCACACACCTGTAAGCCAGGGGAGGC  1168

Query 1172  CAGAG-AGATACCGCCGGCATGGGACCCACTCAGTCAAGATCACAGGATGGGGAGAGGAGACGCTGCCAGATGG  1244
            |.||| || ||||||.|.||||||||.|||||||||||||||||.||.||||||||.||||||||||||||.||
Sbjct 1169  CGGAGCAG-TACCGCAGACATGGGACTCACTCAGTCAAGATCACTGGGTGGGGAGAAGAGACGCTGCCAGACGG  1241

Query 1245  AAGGACGCTCAAATACTGGACTGCGGCCAACTCCTGGGGCCCAGCCTGGGGCGAGAGGGGCCACTTCCGCATCG  1318
            ||||||..|.||.|||||||||||.||||||||.|||||||||...|||||.||.||||||||||||||.||||
Sbjct 1242  AAGGACCATTAAGTACTGGACTGCTGCCAACTCGTGGGGCCCATGGTGGGGTGAAAGGGGCCACTTCCGGATCG  1315

Query 1319  TGCGCGGCGTCAATGAGTGCGACATCGAGAGCTTCGTGCTGGGCGTCTGGGGCCGCGTGGGCATGGAGGACATG  1392
            ||||.|||..|||.||||||||||||||||.|||||||||||||||||||||.||||||||.||||||||||||
Sbjct 1316  TGCGTGGCACCAACGAGTGCGACATCGAGACCTTCGTGCTGGGCGTCTGGGGTCGCGTGGGAATGGAGGACATG  1389

Query 1393  GGTCATCAC  1401
            ||.||.|||
Sbjct 1390  GGGCACCAC  1398

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