Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03986
Subject:
NR_040586.1
Aligned Length:
2143
Identities:
450
Gaps:
1693

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCGAACGACCGCAGCAGGGTCACAAGGGAGATGTCCGCCCCCAGTCGTAGCCTCGGACGGTTTCTGAGCGTTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGTTTGGCACGCGCCACCCTCTCTTGCTTTGGTTCCGCCATGCCGATGTACCAGGTAAAACCTTATCACGGGCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGCGCGCCTCTCCGTGTGGAGCTTCCCACCTGCATGTACCGGCTCTCTAACGTGCAAGGCAGGAGCGGCGGCC  222

Query    1  ------------------------------------ATGAGTGGCTGGATAGCTACAAGCAAGACCAGGATGCA  38
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGCGCCCGGCGTTGGCCACCTACAGTCTTTGGTAGATGAGTGGCTGGATAGCTACAAGCAAGACCAGGATGCA  296

Query   39  GGATTTCTGGAGCTTGTTAACTTTTTCATCTGATCTTGTGGATGTAAAGGACTCGGGGGACTATCCTCTGACAG  112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGATTTCTGGAGCTTGTTAACTTTTTCATCTGATCTTGTGGATGTAAAGGACTCGGGGGACTATCCTCTGACAG  370

Query  113  CTCCAGGTCTATCCTGGAAGAAGTTCCAGGGCAGCTTCTGTGAGTTTGTGGGGACATTGGTCTGTCGGTGCCAG  186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTCCAGGTCTATCCTGGAAGAAGTTCCAGGGCAGCTTCTGTGAGTTTGTGGGGACATTGGTCTGTCGGTGCCAG  444

Query  187  TACATCCTCCTCCATGATGACTTCCCTATGGACAACCTCATCTCCCTGCTCACTGGCTTCTCAGACTCACAAGT  260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TACATCCTCCTCCATGATGACTTCCCTATGGACAACCTCATCTCCCTGCTCACTGGCTTCTCAGACTCACAAGT  518

Query  261  CTGCGCCTTCTGTCACACTAGCACCCTGGCTGCTATGAAACTGATGACCTCCCTGGTAAGAGTTGCCCTCCAAC  334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTGCGCCTTCTGTCACACTAGCACCCTGGCTGCTATGAAACTGATGACCTCCCTGGTAAGAGTTGCCCTCCAAC  592

Query  335  TGAGTCTGCACGAAGATATCAATCAGCGTCAGTATGAGGCTGAAAGAAACAAGGGGCCAGGGCAGAGGGCACCT  408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGAGTCTGCACGAAGATATCAATCAGCGTCAGTATGAGGCTGAAAGAAACAAGGGGCCAGGGCAGAGGGCACCT  666

Query  409  GAGCGGCTGGAGAGCCTGTTGGAGAAACACAAAGAGCTGCAT--------------------------------  450
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct  667  GAGCGGCTGGAGAGCCTGTTGGAGAAACACAAAGAGCTGCATTAATACTACATTGTCAAAGACAAAGACGAACA  740

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct  741  TGAGACATGCGATATGAGTTTTAAAAGGAGAGAAGAGCAAAAAAACAATACAGCTATCCAAGGAGCAAGTGCTG  814

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct  815  AGCTTGTGAAAAAACAGCTTCTATTTTATTAAATAATAGTGTTCCTGCAGGGATGTCTGAAGTACTCTGCAAGG  888

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct  889  CTAATTAGGACAGATCAATGTACACTTACCTCTCCAGAAGGCTGAAAGGTGTGTAGTGACTATGTGTCATTAAA  962

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct  963  AATTTACTTGACCATGGGCAACAGATGTCCATGAAAGAATGACCCTGGTGAGTGCTCTAAGTTTTCATTTTACT  1036

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1037  CATGTCATCCTCAATGCATCATAAATGCCATAGACACCATTACTATCACGTAGGCTCATAGCAGCTGATGTGCT  1110

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1111  GTATATGCTTGAGAGGGTGGTATCAATTAACTATATTATCTATAAAGCCATACTTGCAATTACTACCACTTCAC  1184

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1185  AATTTATCATTAACGCATTTGGCAGATTTTTTTTTCTCCAAAGTAACATTTATTTAAAGGTTTATCAAAATTCT  1258

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1259  TAGAACAGCATTTATTATAATGTGATTTTTGATAATTGACTAAATCAGTGGCTCTTAAAAACACCCTCATCTCA  1332

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1333  GTCCCGCTCAGTATACACCACAGTGCCATTTGGGGAAAAGAAATACATATTAGAAATGTTCATTTCAGACCTCG  1406

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1407  TCATGGAAGATCATATATTAATGTAATCAGGTGGTACGTTTACATGCTCATTAGTAATCCATCATTAGTCCAAA  1480

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1481  TGCTCACTATTAGGAATAAATGTACAACGAGTTATTCAGAATACCCAGAAAGAGTATTTCTTATTTAAACATTC  1554

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1555  AGGACAAGCTGACTGAAATAAGTGCACACCTTGAATTTGAACTTTCAAGGCACATCACTAAAGTCAATCAGTTA  1628

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1629  TGTCAGGACACTCTTCTATAATAATCTCAATTATAAAATTCCTGCCTCTCCCTAACACAGGAGTTGGAGGGAGT  1702

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1703  TCCAATATCTGAATCTTTCTAATTCACTGTAACTGCAAAAAAATCTTGATGAAGTGTGTATTTAAATTTCATGC  1776

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1777  CTTAATACATAGCATGCCACTAAAACCACATTAGTTATGCTTTATGCTGCTTAATCATACGTCAAAATCTGTAA  1850

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1851  AATCTGCTCTTGCATGCTAAGGTAATTTAACTGCAATTAATCAATTAAGAAAAATAAAATGTAATAAATGCCAA  1924

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1925  ATAATGTAACTTCTTTTAAACAGACCACTATCTACACATTTATTCCCCAAATACTTATTAGCTGACACCATATA  1998

Query  451  --------------------------------------------------------------------------  450
                                                                                      
Sbjct 1999  AGGAAAACATAATAAAAAGTAGACTTCACTGAGCCTTTCTCCCATTAGTAGCTTGCTCTAAACTTACAAATGTT  2072

Query  451  -----------------------------------------------------------------------  450
                                                                                   
Sbjct 2073  TTAGAGAATTCTTTGGCATGATCTGACTTTCCAACTAAAATGTGAGCAACTTGAAAAAAAAAAAAAAAAAA  2143

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.