Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04000
Subject:
NR_146195.2
Aligned Length:
3098
Identities:
1296
Gaps:
1802

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCGCGCCCGCTCCGACGTGTCCAGGTCCGCGGCCCCGGGAGCTTGGCGCGGCCCGGCCTGGATGCGCTGGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGG  148

Query    1  --------------------------------------------------ATGACTGAACTACAGCAAGATGTG  24
                                                              ||||||||||||||||||||||||
Sbjct  149  GCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTG  222

Query   25  GAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA  98
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA  296

Query   99  TGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACT  172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACT  370

Query  173  CCCCAGACCAGAAGAAAATCATTAGCCTATG-------------------------------------------  203
            |||||||||||||||||||||||||||||||                                           
Sbjct  371  CCCCAGACCAGAAGAAAATCATTAGCCTATGCCCATATCTTCTCTCCAAATCTATGCTTCATTCAGGACCAAGA  444

Query  204  GTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACC  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACC  518

Query  278  CTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTT  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTT  592

Query  352  AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAA  425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAA  666

Query  426  GCTCTTTGTATCAGAAAACTGGATTTGTTTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAG  499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCTCTTTGTATCAGAAAACTGGATTTGTTTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAG  740

Query  500  CTTTCTCGGTAACCCTAATAAAGAAAACCAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTC  573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTTCTCGGTAACCCTAATAAAGAAAACCAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTC  814

Query  574  ACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACA  647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACA  888

Query  648  CTTAGAAAATACAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTT  721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTTAGAAAATACAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTT  962

Query  722  CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG  795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CATCTCTGCCTCTGGATTTCAATGATGAATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATG  1036

Query  796  GAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA  869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCA  1110

Query  870  AACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAG  943
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAG  1184

Query  944  GAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAA  1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAA  1258

Query 1018  TGTCCGATGCTTCACCATATTCTTATATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACAT  1091
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGTCCGATGCTTCACCATATTCTTATATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACAT  1332

Query 1092  GAGATACAGAATTAATACTCTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAAC  1165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GAGATACAGAATTAATACTCTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAAC  1406

Query 1166  AGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC  1239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAAC  1480

Query 1240  ATAGTGAAATTAGAAA----------------------------------------------------------  1255
            ||||||||||||||||                                                          
Sbjct 1481  ATAGTGAAATTAGAAAAGTGATATTCTTTGGATTAGAAACACATGGGATCCTGCCGCCTTCTTTTGTGTTTCTT  1554

Query 1256  --------------------------------------------------------------------------  1255
                                                                                      
Sbjct 1555  CCCACTCTCCCGCTGGGCCTGGCCGGGACACCACATTCTGTAACCAGGGAACTGAAAACAGAAGAGCTTGTTCA  1628

Query 1256  ------------------AGATACAAAATAACTTACAGAAGTTGCTTGAGAATGGTGAC---------------  1296
                              |||||||||||||||||||||||||||||||||||||||||               
Sbjct 1629  CAGCAGGCAAACAGCCTCAGATACAAAATAACTTACAGAAGTTGCTTGAGAATGGTGACTGATCGACCAGATTG  1702

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1703  CTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAGGTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCT  1776

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1777  GCTGGTCAGAGGTGCAAGCAGATGAGAATCCAGACATTGCATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGG  1850

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1851  GAAATAATTTTGGTTCTTGTGCAATAAAAGTTGACCTTGACTCTCTGAGGAAGATTTTGCTGCTTTTGCCTGAA  1924

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1925  GAAAACAGACCCATCTCTGGAGGTCTCAGGAAGGGCCCAGCGAACACACTCTCTTGGATAATTACCACGATGGC  1998

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1999  GTCAGCAAACACTCCACCCTGTGCCTTTTTAGTCCTTCCCGCCCTCCTGCCTCTCCCTTACACCCCTCTTAACG  2072

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2073  ACTTTCAAACTAAAGGATACATCATATACTGACAAACTCAATGTGGTCCTTTCAAGAATTAGCCATGAGTCTCA  2146

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2147  AAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCAAACAAGTAACATCTACATTTTGTCTTTTTTTTTT  2220

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2221  CAGTTCTCCTGTTATGTTCTGGTTGAAATCACCTGTGTGTCTTAATTTCTCAATTCCTTTTTGGCAAGAATATC  2294

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2295  AAGCAAGGTGAATTTAACATTATGTTTATGTTTTGTTTTGTTGCTGTAACTAATAGTTAATTGGACTGATTCTT  2368

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2369  ACCCAGCCCTGGTCAAGAATCTGTGAGGCATGTGACTGAAGTACTAAATTAAACTTATTTTGAAACCAAACCTA  2442

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2443  ATTTTTAAGCCAAAAGGTGTAATAGTGATTTAATACAGGATGAAAAACACTGAATTTTTAAGACTGTAGGTGGA  2516

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2517  CTATGTTAGTAGTTTTCAAGCAGGATGTCTGTATTCAGCATTCAATAATGCTAAAATCCCTTTCAGCATGAAAT  2590

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2591  TTGTATGTTTTTATCCTTTGCTGACTAAAATAAAATAACTGGTGGTTTGCTAACTATTTACCATATGGGTTGGC  2664

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2665  TGGTTTTTATTAATAATTGTTTAGGGTATCATAAGATCTGTAAGTACAAAGGATATTCTGTTTCTATCTGCAAT  2738

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2739  GCATTTGATAATCATTTCTATGAAATGTATTTTATTTAATCAGATAAGCTAATAAGCGAATTGGTTACATCGTT  2812

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2813  TGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTGCACCTCTGGCTTTTAATAAATACTCATTGGTTGAAACA  2886

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2887  CCCTGCTAACACTGTGTTTTGTCAGTTCGTAAATTCCTTTAACCAAGACTTAACTATGCTTTTTAACTCTTTTT  2960

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2961  CCACCTGCCATCTACTACTACCAACTCACTTATACTTCCTTCCTCCCAAGTAATCATTTCAAAACTAAAAAAGG  3034

Query 1297  ----------------------------------------------------------------  1296
                                                                            
Sbjct 3035  ATTTAAGTTCTTGGGTTACAACGGTTTAAAGGAAAGAAAATGAACTTTGAAGTCAAAAAAAAAA  3098

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