Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04000
Subject:
NR_146197.2
Aligned Length:
3058
Identities:
1184
Gaps:
1874

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCGCGCCCGCTCCGACGTGTCCAGGTCCGCGGCCCCGGGAGCTTGGCGCGGCCCGGCCTGGATGCGCTGGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGGGTGCAGGGGAGGGCACGGCGCCGCTTGCTTGGCCTGCGCACCCGGACCTAGAAGCCGGGACGAGCCGGG  148

Query    1  --------------------------------------------------ATGACTGAACTACAGCAAGATGTG  24
                                                              ||||||||||||||||||||||||
Sbjct  149  GCAGAGCCAGGCGCGCGGAAGTCTGAAGGTGCCCTCCAGACACGGCCCCGATGACTGAACTACAGCAAGATGTG  222

Query   25  GAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA  98
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGGCTCAGCCCACTCAGAGGCTGAGAA  296

Query   99  TGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACT  172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCATCTGTGGAGGCGGACT  370

Query  173  CCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAG  246
            ||||||||||||||||||||||||||||||                                            
Sbjct  371  CCCCAGACCAGAAGAAAATCATTAGCCTAT--------------------------------------------  400

Query  247  AACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAA  320
                                                                                ||||||
Sbjct  401  --------------------------------------------------------------------GTACAA  406

Query  321  GGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTTACCTGTG  394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  407  GGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTTACCTGTG  480

Query  395  CTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAACTGGATTTGTTTTCATTCCAAAGTC  468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  CTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAACTGGATTTGTTTTCATTCCAAAGTC  554

Query  469  TTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAACCAAAACTGCTCTTCT  542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  555  TTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAACCAAAACTGCTCTTCT  628

Query  543  AGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAA  616
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  629  AGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAA  702

Query  617  CTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGTCCCAATCCATCTTCT  690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  703  CTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGTCCCAATCCATCTTCT  776

Query  691  GCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGAATTCTCAGATCTGGA  764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  777  GCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGAATTCTCAGATCTGGA  850

Query  765  TGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGA  838
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  851  TGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGA  924

Query  839  ACTCTCG---AGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACT  909
            |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  925  ACTCTCGAGTAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACT  998

Query  910  CGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAAC  983
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  999  CGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAAC  1072

Query  984  TGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATATTCTTATATTCTATGCAATTG  1057
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073  TGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATATTCTTATATTCTATGCAATTG  1146

Query 1058  TTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACTCTGGAGGAGCAGCTGGGGTTA  1131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147  TTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACTCTGGAGGAGCAGCTGGGGTTA  1220

Query 1132  CTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAA  1205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221  CTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAA  1294

Query 1206  TGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAA------------------------  1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||                        
Sbjct 1295  TGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGTGATATTCTTTGGATTAGAAAC  1368

Query 1256  --------------------------------------------------------------------------  1255
                                                                                      
Sbjct 1369  ACATGGGATCCTGCCGCCTTCTTTTGTGTTTCTTCCCACTCTCCCGCTGGGCCTGGCCGGGACACCACATTCTG  1442

Query 1256  ----------------------------------------------------AGATACAAAATAACTTACAGAA  1277
                                                                ||||||||||||||||||||||
Sbjct 1443  TAACCAGGGAACTGAAAACAGAAGAGCTTGTTCACAGCAGGCAAACAGCCTCAGATACAAAATAACTTACAGAA  1516

Query 1278  GTTGCTTGAGAATGGTGAC-------------------------------------------------------  1296
            |||||||||||||||||||                                                       
Sbjct 1517  GTTGCTTGAGAATGGTGACTGATCGACCAGATTGCTTGGGCCATCGGAATACCTCATGTTTCCCTTTGAAGAAG  1590

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1591  GTGCTTCCTGAGGCGTTTTGTTTGAGTGCACCCTGCTGGTCAGAGGTGCAAGCAGATGAGAATCCAGACATTGC  1664

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1665  ATGTGGAGGTCTCCAGCTCAGGAAAGTGAGGAGGGAAATAATTTTGGTTCTTGTGCAATAAAAGTTGACCTTGA  1738

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1739  CTCTCTGAGGAAGATTTTGCTGCTTTTGCCTGAAGAAAACAGACCCATCTCTGGAGGTCTCAGGAAGGGCCCAG  1812

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1813  CGAACACACTCTCTTGGATAATTACCACGATGGCGTCAGCAAACACTCCACCCTGTGCCTTTTTAGTCCTTCCC  1886

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1887  GCCCTCCTGCCTCTCCCTTACACCCCTCTTAACGACTTTCAAACTAAAGGATACATCATATACTGACAAACTCA  1960

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 1961  ATGTGGTCCTTTCAAGAATTAGCCATGAGTCTCAAAAAGGCAATAAATGGCTCTAAGTGGACAGGTTTGCTTCA  2034

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2035  AACAAGTAACATCTACATTTTGTCTTTTTTTTTTCAGTTCTCCTGTTATGTTCTGGTTGAAATCACCTGTGTGT  2108

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2109  CTTAATTTCTCAATTCCTTTTTGGCAAGAATATCAAGCAAGGTGAATTTAACATTATGTTTATGTTTTGTTTTG  2182

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2183  TTGCTGTAACTAATAGTTAATTGGACTGATTCTTACCCAGCCCTGGTCAAGAATCTGTGAGGCATGTGACTGAA  2256

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2257  GTACTAAATTAAACTTATTTTGAAACCAAACCTAATTTTTAAGCCAAAAGGTGTAATAGTGATTTAATACAGGA  2330

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2331  TGAAAAACACTGAATTTTTAAGACTGTAGGTGGACTATGTTAGTAGTTTTCAAGCAGGATGTCTGTATTCAGCA  2404

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2405  TTCAATAATGCTAAAATCCCTTTCAGCATGAAATTTGTATGTTTTTATCCTTTGCTGACTAAAATAAAATAACT  2478

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2479  GGTGGTTTGCTAACTATTTACCATATGGGTTGGCTGGTTTTTATTAATAATTGTTTAGGGTATCATAAGATCTG  2552

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2553  TAAGTACAAAGGATATTCTGTTTCTATCTGCAATGCATTTGATAATCATTTCTATGAAATGTATTTTATTTAAT  2626

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2627  CAGATAAGCTAATAAGCGAATTGGTTACATCGTTTGTATCTGTTGGCCTAGTGGACAGCTGTGCCTGGTGCACC  2700

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2701  TCTGGCTTTTAATAAATACTCATTGGTTGAAACACCCTGCTAACACTGTGTTTTGTCAGTTCGTAAATTCCTTT  2774

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2775  AACCAAGACTTAACTATGCTTTTTAACTCTTTTTCCACCTGCCATCTACTACTACCAACTCACTTATACTTCCT  2848

Query 1297  --------------------------------------------------------------------------  1296
                                                                                      
Sbjct 2849  TCCTCCCAAGTAATCATTTCAAAACTAAAAAAGGATTTAAGTTCTTGGGTTACAACGGTTTAAAGGAAAGAAAA  2922

Query 1297  ------------------------  1296
                                    
Sbjct 2923  TGAACTTTGAAGTCAAAAAAAAAA  2946

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