Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04000
Subject:
XM_005272057.4
Aligned Length:
1364
Identities:
1263
Gaps:
91

Alignment

Query    1  ATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGC--------GAAA--GTGCT--------------  50
                               |||..|||||   ||||.||||        ||.|  |||.|              
Sbjct    1  -------------------ATGGTGAAGA---AAAGGCTGCCTTCTAGTGACACGGTGTTCCGGTTTGAGACTC  52

Query   51  CGGGAAG----AGGGAGAGCAAACTTGG----CT----------------CAGCCC-----------------A  83
            ||||.||    |||.|| ||.|||.|||    ||                ||||||                 .
Sbjct   53  CGGGCAGCCCAAGGAAG-GCCAACGTGGAGGCCTCACGCAGCTCCACAGACAGCCCCAGCTCGGTGTTCCTCAG  125

Query   84  CTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCAT  157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  126  CTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCAATCCCCTACCCCAT  199

Query  158  CTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGATGGTGCCTCT  231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  200  CTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCAGTTTTGATGGTGCCTCT  273

Query  232  TTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATC  305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  274  TTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATC  347

Query  306  TTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGC  379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  348  TTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGC  421

Query  380  AAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAACTGGATTTGT  453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  422  AAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAACTGGATTTGT  495

Query  454  TTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAAC  527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  496  TTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAAC  569

Query  528  CAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTCCTTAC  601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  570  CAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTCCTTAC  643

Query  602  TCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGT  675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  644  TCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGT  717

Query  676  CCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGA  749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  718  CCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGA  791

Query  750  ATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA  823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  792  ATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAA  865

Query  824  CTCCTGAATCTGAGAACTCTCG---AGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGA  894
            ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  866  CTCCTGAATCTGAGAACTCTCGAGTAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGA  939

Query  895  GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA  968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  940  GAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACA  1013

Query  969  GGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATATTCTTA  1042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014  GGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATATTCTTA  1087

Query 1043  TATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACTCTGGAG  1116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088  TATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACTCTGGAG  1161

Query 1117  GAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTC  1190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162  GAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTC  1235

Query 1191  ACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGATACAAA  1264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1236  ACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGATACAAA  1309

Query 1265  ATAACTTACAGAAGTTGCTTGAGAATGGTGAC  1296
            ||||||||||||||||||||||||||||||||
Sbjct 1310  ATAACTTACAGAAGTTGCTTGAGAATGGTGAC  1341

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