Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04000
Subject:
XM_005272063.3
Aligned Length:
1304
Identities:
1236
Gaps:
64

Alignment

Query    1  ATGACTGAACTACAGCAAGATGTGGAAGACACAAAGCCTGCGAAAGTGCTCGGGAAGAGGGAGAGCAAACTTGG  74
                               ||||                 |.|||||      ||||.||          ||..
Sbjct    1  -------------------ATGT-----------------CTAAAGT------GAAGCGG----------TTTC  22

Query   75  C--------TCAGCCCACTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGC  140
            |        ||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   23  CTTTCTTCTTCAG----CTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGC  92

Query  141  CCAATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCA  214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   93  CCAATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGGTCAAAATCCA  166

Query  215  GTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAA  288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  167  GTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAACGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAA  240

Query  289  AGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAAC  362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241  AGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGGCCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAAC  314

Query  363  GGAGGAACCACTGAAGCAAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTAT  436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  315  GGAGGAACCACTGAAGCAAAGCTTTACCTGTGCTCTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTAT  388

Query  437  CAGAAAACTGGATTTGTTTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTA  510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  389  CAGAAAACTGGATTTGTTTTCATTCCAAAGTCTTTGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTA  462

Query  511  ACCCTAATAAAGAAAACCAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTA  584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  463  ACCCTAATAAAGAAAACCAAAACTGCTCTTCTAGTGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTA  536

Query  585  CATATTTGTCTCCTTACTCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATA  658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  537  CATATTTGTCTCCTTACTCTCCAGAGATTCAACTTACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATA  610

Query  659  CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCT  732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  611  CAAGTGTTGGTAACAGTCCCAATCCATCTTCTGCTGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCT  684

Query  733  CTGGATTTCAATGATGAATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAG  806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  685  CTGGATTTCAATGATGAATTCTCAGATCTGGATGGAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAG  758

Query  807  CAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGA  880
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  759  CAGTTCTGGTTCTCAAACTCCTGAATCTGAGAACTCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGA  832

Query  881  ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAG  954
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  833  ATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGCAGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAG  906

Query  955  AGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT  1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  907  AGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTGGAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCT  980

Query 1029  TCACCATATTCTTATATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAA  1102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  981  TCACCATATTCTTATATTCTATGCAATTGTTGTCTGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAA  1054

Query 1103  TTAATACTCTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCA  1176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055  TTAATACTCTGGAGGAGCAGCTGGGGTTACTAACCTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCA  1128

Query 1177  TCTGGCCTGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATT  1250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129  TCTGGCCTGAGGTCACAAGTACAATTCAATGTGGAGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATT  1202

Query 1251  AGAAAAGATACAAAATAACTTACAGAAGTTGCTTGAGAATGGTGAC  1296
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203  AGAAAAGATACAAAATAACTTACAGAAGTTGCTTGAGAATGGTGAC  1248

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