Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04000
Subject:
XM_011543592.3
Aligned Length:
1492
Identities:
1265
Gaps:
218

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAAACAAAAGGGGTGGGGGTTCCCAGCAGGAAGGCTCACACCTGCAGGAGGCCACACGTGAGCGTGTGTAC  74

Query    1  ----------------------------------------ATGA----CTGAACTACAGCA-AG---ATGTGGA  26
                                                    .|||    |||  |..||||| ||   |||    
Sbjct   75  ATGTGCGTGTGTGCTTGTGCAGGGCGCTCCCAGCCTCCAGGTGATCTGCTG--CCCCAGCACAGCCCATG----  142

Query   27  AGACACAAAGCCTGCGAAAGTGCTCGGGA----AGA---GGGAG--AGCAA----AC-----TTGGC-------  75
                 ||.|||       ||.|||.||.|    |||   |||||  |||||    ||     .||||       
Sbjct  143  -----CAGAGC-------AGAGCTGGGCAGCACAGACCTGGGAGCCAGCAAGTCCACACAGTCTGGCATTTACA  204

Query   76  ------TCAGCCCACTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCA  143
                  .|||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  205  AGTGAAACAG----CTCAGAGGCTGAGAATGGTGTGGAGGAGAAAAAGAAAGCCTGCAGGTCGCCAACAGCCCA  274

Query  144  ATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATG--------------  203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct  275  ATCCCCTACCCCATCTGTGGAGGCGGACTCCCCAGACCAGAAGAAAATCATTAGCCTATGCCCATATCTTCTCT  348

Query  204  -----------------------------GTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAA  248
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  349  CCAAATCTATGCTTCATTCAGGACCAAGAGTCAAAATCCAGTTTTGATGGTGCCTCTTTAGCAAGTGATAAGAA  422

Query  249  CGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGG  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  423  CGACTGTAAAACAGAAAGCAAAAATGACCCTAAGACTGAAAGAAAAAAGTCTTCATCTTCCAGCCAGTACAAGG  496

Query  323  CCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT  396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  497  CCAATATGCACTTTCACAAGTTGTTTCTTAGTGTCCCAACGGAGGAACCACTGAAGCAAAGCTTTACCTGTGCT  570

Query  397  CTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAACTGGATTTGTTTTCATTCCAAAGTCTT  470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  571  CTACAGAAAGAAATACTATACCAAGGAAAGCTCTTTGTATCAGAAAACTGGATTTGTTTTCATTCCAAAGTCTT  644

Query  471  TGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAACCAAAACTGCTCTTCTAG  544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  645  TGGAAAAGACACAAAGATCTCTATTCCAGCTTTCTCGGTAACCCTAATAAAGAAAACCAAAACTGCTCTTCTAG  718

Query  545  TGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAACT  618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  719  TGCCAAACGCCCTGATCATAGCAACAGTCACAGACAGGTACATATTTGTCTCCTTACTCTCCAGAGATTCAACT  792

Query  619  TACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGTCCCAATCCATCTTCTGC  692
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  TACAAACTACTAAAATCTGTGTGTGGACACTTAGAAAATACAAGTGTTGGTAACAGTCCCAATCCATCTTCTGC  866

Query  693  TGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGAATTCTCAGATCTGGATG  766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  867  TGAAAACAGTTTCCGAGCAGACCGCCCTTCATCTCTGCCTCTGGATTTCAATGATGAATTCTCAGATCTGGATG  940

Query  767  GAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAAC  840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  941  GAGTGGTTCAACAAAGAAGGCAAGACATGGAAGGATATAGCAGTTCTGGTTCTCAAACTCCTGAATCTGAGAAC  1014

Query  841  TCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGC  914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  TCTCGAGATTTCCATGCGACAGAATCCCAAACAGTTCTGAATGTCTCCAAGGGAGAAGCAAAGCCAACTCGGGC  1088

Query  915  AGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTG  988
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089  AGATGCCCATGTGAACAGAGTACCTGAAGGAAAAGCCAAGAGTCTCCCTGTACAGGGTCTGTCAGAAACTGTTG  1162

Query  989  GAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATATTCTTATATTCTATGCAATTGTTGTC  1062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163  GAATCTTACATAAAGTCAAGTCTCAGAAATGTCCGATGCTTCACCATATTCTTATATTCTATGCAATTGTTGTC  1236

Query 1063  TGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC  1136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237  TGTGCACTAATCATCTCGACCTTCTACATGAGATACAGAATTAATACTCTGGAGGAGCAGCTGGGGTTACTAAC  1310

Query 1137  CTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAATGTGG  1210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311  CTCCATTGTGGACACCCATAATACTGAACAGGCAGCACCATCTGGCCTGAGGTCACAAGTACAATTCAATGTGG  1384

Query 1211  AGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGATACAAAATAACTTACAGAAGTTGCTT  1284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1385  AGGTTCTCTGTCAAGAGCTTACAGCTAACATAGTGAAATTAGAAAAGATACAAAATAACTTACAGAAGTTGCTT  1458

Query 1285  GAGAATGGTGAC  1296
            ||||||||||||
Sbjct 1459  GAGAATGGTGAC  1470

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