Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04579
Subject:
XR_002956824.1
Aligned Length:
2508
Identities:
786
Gaps:
1722

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTCCTTAGTAACCTGGGCGATAGCTGATGAGACGGAAGTCCTGAGAGTTTGACCGATTTAAGGTCACGTGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGAAGTGCTGGAACCAAGACTCGGAGTTTTCTCTAAGTTTAGTGCCTTTATTTTGTTTTAAACCACACTGTTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CATTTCCCCCCATTTTGGAAAGCTTTATAGTTGGAAAGAATGAAAACCTGATCTGACCCCTTCATTTTATGGTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAACAAAATCTACGTAGGAGAAATCACTTGGTACAAGTCACAAGTCAGTGGTAGAGCTGCCGCAAATGCTTTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGAATACGTGTGATTATGAATCTAAATGGCAGATGGCAGGGAGTGATAAGTGGATGTTTCCAAGGATTGTCTTC  370

Query    1  ----ATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA  70
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGTCATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA  444

Query   71  GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA  144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA  518

Query  145  GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA  218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA  592

Query  219  TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG  292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG  666

Query  293  CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA  366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA  740

Query  367  ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA  814

Query  441  TATGGCCAGCTTCCCAG---------------------------------------------------------  457
            |||||||||||||||||                                                         
Sbjct  815  TATGGCCAGCTTCCCAGAGGTAAGATGGCCTTGCTAAAATCTCTCTCCGTGGTCTCTTTTGGAATGGAGGAGAC  888

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  889  TGGGTCATATCAGGAGGAAGTGTTCCTTCAGCTTAGGATGAAACAAGAGAGAAGACATAATAAAGAGAACTTAA  962

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  963  GGATAAGGCAAAGCTCTTTTCCTGTTGCCAGATTCCTTTTCTGTTAAACTCAGATGCTACAGAGGCTAGGTAAG  1036

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1037  TTGTTTGAATACCCAAACGGGTCCCATCTAAGAAAAACAATACTGGAGATGCAGTGATTGGTGCTTGGCCAGCG  1110

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1111  TGAAAAGGCTCTGGTGAGCTGGAGAGCCTGTACCTTGTGTGAGTGGAATGCCTCTGCCCAGCTCCTGCTGATCA  1184

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1185  TTGCCAGGCACAATGTAGGCCTGGTAATCAGTGTTACCTGATACTACGATTTTTATTTCCAGAAGAAGCTAGTA  1258

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1259  ACACAAATTTTTATGTGACATCTTTATTCTGTAAATGTTGATGACTAATTGAGTTTTTTTTTTAAAGACTATGA  1332

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1333  AGCAAATAAAACAATACTTTAATGGGCCAAATGTGGCCTGAGGGCCACCAATTTGTGACCTCTGCATTAGTATT  1406

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1407  TGGAGCAGACCCTCCAGGAAGTCCTTTTATACTAGACTGACCATTGCAGAATATTGCATGGAGCACAGTGCTTC  1480

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1481  CAAAACTGGAAGGAATTGGCCTGGATTAGGAGTCTTAGAGTACCTGGAATCCGGTCCCATCTCTACCACCAACT  1554

Query  458  ----------------------------------------------------------------AGTGTACAGC  467
                                                                            ||||||||||
Sbjct 1555  GGCTGTTTGACCTTGGGCAAGTTGCTTCACTCTCTGGGCCTCCATTTCCTCATCTGCTAATATAAGTGTACAGC  1628

Query  468  TGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTAC  541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTAC  1702

Query  542  CCATTCCCC-----------------------------------------------------------------  550
            |||||||||                                                                 
Sbjct 1703  CCATTCCCCAAATGTGAGTGCTTTGAGAGGAGAGAGGAAGAGCTTTGTCAGTTTTGTTCATTGCTGTATTCCTA  1776

Query  551  -------------------------AAGTAACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAA  599
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GGCCCTCAAACAGAGCCTAGCATGTAAGTAACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAA  1850

Query  600  CACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATA  673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATA  1924

Query  674  CAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTG  747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTG  1998

Query  748  GACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGA-----------------------------------  786
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct 1999  GACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGATGAAAGTCCACTGGGGCCAGCAATACTCCAGAGCC  2072

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2073  CAGTTTCTGCTGGATCCCATGGGTGGCACATTGGGACTTCTCTCCCTCCCCCATCTACACAGAAGACTGTCACC  2146

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2147  ATGCTGACAGAAGCCTGTCCTTGTAAGGCCCAGCCTTCCAGGGGAACACTCAGACATGTTCATTCTCTTCCTGC  2220

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2221  TTCTGCTCTGGGCCGGTGGGTGGCTCTCAGAAAATACTTGCTGCTGGCAAAAGGCCTGTACTCAGGCATTTGCT  2294

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2295  TTGACTTGATGTTGCCAAGGGACTGAGGCCATTGGCAGGCTTAGTACCACCTGCTCCTCATCTTAGGAGTCTCC  2368

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2369  TTTTCAAATAATTAGGCTCTGTTCCCATTTTAAAACTCTGATATTGGCCTTCACCTGTGACTGGACACTTTACT  2442

Query  787  ------------------------------------------------------------------  786
                                                                              
Sbjct 2443  AGAGGCCCATTTTCACTAAACAATAAAATCTAAATAAATTGGAAGGAATAACAACCACAAAGGAAA  2508

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