Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04659
Subject:
XM_011514281.3
Aligned Length:
1930
Identities:
987
Gaps:
941

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGTAACAGCCACCCTCTTCGCCCCTTTACTGCAGTGGGGGAAATTGATCATGTGCACATTTTGTCTGAACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TATTGGTGCCTTGTTGATTGGGGAAGAATATGGCGACGTCACATTCGTGGTGGAAAAGAAACGTTTTCCTGCCC  148

Query    1  --------------------ATGTGC---------AGAGCATTATTATATGGTGGAATGCGAGAGTCTCAGCCT  45
                                |.||||         .||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACAGGGTAATTTTAGCAGCCAGGTGCCAATATTTTCGAGCATTATTATATGGTGGAATGCGAGAGTCTCAGCCT  222

Query   46  GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAAGCATTCACAATGCTACTCAAATATATCTACACTGGGCG  119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAAGCATTCACAATGCTACTCAAATATATCTACACTGGGCG  296

Query  120  GGCAACGCTGACAGATGAGAAGGAGGAGGTGCTGCTGGACTTTTTGAGCCTGGCTCATAAATATGGATTTCCAG  193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCAACGCTGACAGATGAGAAGGAGGAGGTGCTGCTGGACTTTTTGAGCCTGGCTCATAAATATGGATTTCCAG  370

Query  194  AGCTAGAGGATTCTACCTCTGAGTATCTCTGCACCATACTTAACATTCAGAATGTCTGCATGACTTTTGATGTT  267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGCTAGAGGATTCTACCTCTGAGTATCTCTGCACCATACTTAACATTCAGAATGTCTGCATGACTTTTGATGTT  444

Query  268  GCCAGTCTCTACTCACTTCCCAAGTTAACTTGTATGTGCTGCATGTTTATGGATAGGAATGCTCAGGAAGTCCT  341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCCAGTCTCTACTCACTTCCCAAGTTAACTTGTATGTGCTGCATGTTTATGGATAGGAATGCTCAGGAAGTCCT  518

Query  342  CTCAAGTGAAGGTTTCCTCTCCCTTTCTAAGACAGCACTTTTAAACATCGTGTTAAGAGACTCATTTGCAGCTC  415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCAAGTGAAGGTTTCCTCTCCCTTTCTAAGACAGCACTTTTAAACATCGTGTTAAGAGACTCATTTGCAGCTC  592

Query  416  CCGAAAAAGATATTTTCCTAGCCTTATTAAACTGGTGTAAGCACAATTCAAAGGAGAATCATGCTGAAATCATG  489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCGAAAAAGATATTTTCCTAGCCTTATTAAACTGGTGTAAGCACAATTCAAAGGAGAATCATGCTGAAATCATG  666

Query  490  CAGGCTGTGCGTTTACCTCTCATGAGCCTCACAGAGCTTCTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCC  563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGGCTGTGCGTTTACCTCTCATGAGCCTCACAGAGCTTCTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCC  740

Query  564  TGATGCCATCCTGGATGCCATTAAAGTGCGATCTGAGAGCCGGGATATGGACCTCAATTATAGAGGCATGCTCA  637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGATGCCATCCTGGATGCCATTAAAGTGCGATCTGAGAGCCGGGATATGGACCTCAATTATAGAGGCATGCTCA  814

Query  638  TACCAGAAGAAAACATTGCAACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTA  711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TACCAGAAGAAAACATTGCAACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTA  888

Query  712  GATGGTGATACTCAAAATTATGATTTGGATCATGGATTTTCAAGGCACCCAATTGATGATGACTGCCGTTCCGG  785
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GATGGTGATACTCAAAATTATGATTTGGATCATGGATTTTCAAGGCACCCAATTGATGATGACTGCCGTTCCGG  962

Query  786  CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAATCACATACGGATACTCTTGTGGGACCGAGATAGCCGGT  859
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CATCGAGATTAAGCTAGGTCAGCCATCCATTATCAATCACATACGGATACTCTTGTGGGACCGAGATAGCCGGT  1036

Query  860  CTTACTCATACTTCATTGAAGTGTCAATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTG  933
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTTACTCATACTTCATTGAAGTGTCAATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTG  1110

Query  934  TGTCGTTCTTGGCAGAAATTATATTTTCCAGCCCGTGTCTGCAG-------TGGAGATGGAGTCTCACTATGGT  1000
            ||||||||||||||||||||||||||||||||||||||||||||       |||||           |||    
Sbjct 1111  TGTCGTTCTTGGCAGAAATTATATTTTCCAGCCCGTGTCTGCAGGTTCAATTGGAG-----------CTA----  1169

Query 1001  GCCCACTCTGGTCTCGAACTCCTGAGCTCAAGCAATCCTCCCTCCTTGGCCTTCCAAAGTGCAGGTATATTCGA  1074
             ||||                                                                     
Sbjct 1170  -CCCA---------------------------------------------------------------------  1173

Query 1075  ATTGTTGGGACTCACAACACAGTGAACAAGATTTTTCACATTGTGGCTTTTGAATGTATGTTTACAAACAAAAC  1148
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1149  CTTCACTCTTGAGAAGGGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGTGATTG  1222
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1223  AAGGAGTCAGTCGGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAATTATGACTGGGATTCTGGCTACACA  1296
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1297  TGTCACCAGCTAGGAAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTACT  1370
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1371  ACTTTGGGATTGTGATGATCGAAGCTATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCATGG  1444
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1445  TTGCTGACAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTTCATC  1518
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1519  CGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAGCAGCAGAG  1592
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1593  CAGCCAGAAGGAGGAAAATAGTGAGGAATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGCAGCTCGACTCCC  1666
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1667  ATGCGCTGCGGGCGCCTAGTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACTCACGCTCCCCCAACCGGCAG  1740
                                                                                      
Sbjct 1174  --------------------------------------------------------------------------  1173

Query 1741  CACCAA  1746
                  
Sbjct 1174  ------  1173

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