Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05102
Subject:
NR_158606.1
Aligned Length:
2250
Identities:
451
Gaps:
1796

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTTTGGCCGGAAAGGCTTACCATGAGTTGCCAGGGCTGAGAGAGATGGAGAAGGATTCGCGGCGGTGACAGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAAATTCCCCAGTTACATTATAGACTTGGAGACTTGTCCTTGTGTGGACGGGAGCCGGAAAGCCTTGAGAACTT  148

Query    1  ----------------ATGGCACAGGAGAAAATGAAACTAGGTTTCAAGTCGCTGCCGAGTTCCACTACCGCAG  58
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATTCCTCGACCCGGACATGGCACAGGAGAAAATGAAACTAGGTTTCAAGTCGCTGCCGAGTTCCACTACCGCAG  222

Query   59  ACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGTTTTAATTCACAGGTGTTGCAA  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAATGGACTTGGTTTTAATTCACAGGTGTTGCAA  296

Query  133  GCTGACATGTTAAGAATTAGGACAAACAGAACAACATTTAGGAATCGACGCTCTCTGTTGTTGCCACCTCCTCC  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCTGACATGTTAAGAATTAGGACAAACAGAACAACATTTAGGAATCGACGCTCTCTGTTGTTGCCACCTCCTCC  370

Query  207  CTTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAAC------------------------------------  244
            ||||||||||||||||||||||||||||||||||||||                                    
Sbjct  371  CTTTCATGGTTCCATCAGCCGCCTTCATCAAATCAAACAGTCTCCCTCTGATGCCGAGCGGAAGCTGGACTGTA  444

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  445  CTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGC  518

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  519  AGGCGCGCGCAGCCACACCTGACTGGTTTTCGTATTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGC  592

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  593  TGGTCTCCAGCTCCTAACCGCAAGTGATCTGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCT  666

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  667  GGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACCTC  740

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  741  CCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTG  814

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  815  AGGAGCATCTCTGCCTGGCCGCCCATCGTCTGGGAGGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAG  888

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  889  TGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCGGCCGCCATCCCATCT  962

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct  963  AGGAAGTGAGGAGCGTCTCTGCCCCGCTGCCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGCGACCCCG  1036

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct 1037  TCTGGGAGGTGAGGAGCATCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCCGCCTGGCAACCGCC  1110

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct 1111  CCGTCTGAGAAGTGAGGAGCCCCTCCGCCCAGCAGCCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCA  1184

Query  245  --------------------------------------------------------------------------  244
                                                                                      
Sbjct 1185  GCCACACCGTCTGGGAAGTGAGGAGCGTCTCTGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGTCAGCC  1258

Query  245  ---------------------------AGGAAGAAGCCATGGATTTAATAAATAGAGAAACAATGTCTGAATGG  291
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCCGCCAGGCCAGCCGCCCCATCCGGGAGGAAGAAGCCATGGATTTAATAAATAGAGAAACAATGTCTGAATGG  1332

Query  292  AAGCTACAAAGTGAGATACAGATAAGTCACTCTTGGGAAGAAGGCTTGAAACTGAATGACAATGGCTTACAGAA  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AAGCTACAAAGTGAGATACAGATAAGTCACTCTTGGGAAGAAGGCTTGAAACTGAATGACAATGGCTTACAGAA  1406

Query  366  ATCATCCTCTCTAAAGTGCATTGATTTAACTCCAGTATCCTCAATGGCTTCTTCCATCAAGAAGACTGGGAAG-  438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 1407  ATCATCCTCTCTAAAGTGCATTGATTTAACTCCAGTATCCTCAATGGCTTCTTCCATCAAGAAGACTGGGAAGC  1480

Query  439  ------TCTACTTCCAGC--TAC---TTT---------------------------------------------  456
                  |||  .||||.|  |||   .||                                             
Sbjct 1481  AGTGTTTCT--CTCCATCATTACAAACTTGTGTGAGTTGCACTGGTTCGCCTTCAAGTCCTATTCCCAGTCCTA  1552

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1553  TGCAACAATACATCATAAGAAGTCAAAATCCTACCAACATTATTAGACCAAGTATCCTTGGACCATTAAAAAGA  1626

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1627  AAAGGTGAAATGGCATTTCAATATCAACCAAAAAAGATTTTCCAAGGCACAACCAACATGCTTTCTTCTGATAC  1700

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1701  TTCCCAACTGTCAGAAAATAATGTGTATCTACTTCCAGCTACTTTTGATGGAAACGACAGCAATGCTGGATCTT  1774

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1775  CTGGTAATTCGTCAGCTGAAATCGGCACTGTCACAAACTCTCCTGTGTCACCTTCTGATACTGGTTCTCATTTG  1848

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1849  TTCTAGTAGACAAACTTTCAACTAAATGATTCACCCATCCCAAGACTTTCTCACCAGTGGAGAAACACACACAT  1922

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1923  CAAGCAAACCAAGTCAGAGCAATGAGAATTGTACTGTATAATTTAAACTATCTCCTATTTATCTTTTTTCCTCA  1996

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1997  ATTTCCTAAAATTCTATTTATCTACAGAACTTGCGTGTATAATTCTTGTGTACATCCTTAAATTTAATGTAATA  2070

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2071  ACATGTTAAAGATGTTTTCCAAATCAGAACCATGTTGAAGATACAAGCGTAAATTGTTAGGCTGCTATTTTCTA  2144

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2145  GAAAATGCTGTACCTTGACTTTTTAAAATAATCTTATGAAACATAATTCTGATAAAATATAATTGTTCAATTAA  2218

Query  457  ------------------------------  456
                                          
Sbjct 2219  CAAAGTAAAATGATGTTTGACAATTATGTA  2248

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