Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05195
Subject:
NR_033427.2
Aligned Length:
3976
Identities:
1034
Gaps:
2942

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTTTTCTTTAGCCGGGTCCCGCTAACTCGGCTACGGTGTATCTGCGTCTTTGGTCAGGTTGTTCCTTGGCTAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGGGCAGTCGTCGCGGACCCACGCGGTTAGCAAGGCTTAGTGCTCGGGCCGGCCGCCTTCACTTCCCTCCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTTTCCTCCCGACTTATCCACTTTAGGGGCGTCTCGGAGTGCCGGAGGCCCCCGGGGAAGAGCGGGGTGCCGG  222

Query    1  -----------------------------------------------ATGTTCAGTCTGATGGCCAGTTGCTGC  27
                                                           |||||||||||||||||||||||||||
Sbjct  223  TGTCCGCTCCGGGCTCGGATGGGAAGTGGTGGGAGGAGCGACCCGGGATGTTCAGTCTGATGGCCAGTTGCTGC  296

Query   28  GGCTGGTTCAAGCGGTGGCGGGAGCCTGTCAGAAAGGTGACTCTTTTGATGGTGGGACTTGATAATGCTGGTAA  101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCTGGTTCAAGCGGTGGCGGGAGCCTGTCAGAAAGGTGACTCTTTTGATGGTGGGACTTGATAATGCTGGTAA  370

Query  102  AACCGCAACAGCAAAGGGAATCCAAGGAGAATACCCTGAAGATGTAGCTCCTACTGTTGGATTTTCAAAAATTA  175
            |||||||||||||||||||||||||||||                                             
Sbjct  371  AACCGCAACAGCAAAGGGAATCCAAGGAG---------------------------------------------  399

Query  176  ACCTTAGACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGGGAGGTGGAATAAGAATTCGGGGAATCTGGAAG  249
                                                                                      
Sbjct  400  --------------------------------------------------------------------------  399

Query  250  AATTACTATGCTGAATCCTATGGGGTAATATTTGTTGTGGATTCCAGTGATGAAGAGAGAATGGAAGAGACAAA  323
                                                                                      
Sbjct  400  --------------------------------------------------------------------------  399

Query  324  AGAGGCTATGTCAGAAATGCTAAGACATCCTAGGATATCGGGAAAGCCTATATTGGTGTTGGCAAATAAACAAG  397
                                                                     |||||||||||||||||
Sbjct  400  ---------------------------------------------------------GTTGGCAAATAAACAAG  416

Query  398  ATAAAGAAGGAGCTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTCTGGAAAAATTGGTCAATGAGCACAAG  471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  417  ATAAAGAAGGAGCTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTCTGGAAAAATTGGTCAATGAGCACAAG  490

Query  472  TGCCTGTGTCAGATA-----GAACCATGTTCAGCAATCTCGGGGTATGGAAAGAAAATTGACAAGTCCATTAAA  540
            |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  491  TGCCTGTGTCAGATAGTAAGGAACCATGTTCAGCAATCTCGGGGTATGGAAAGAAAATTGACAAGTCCATTAAA  564

Query  541  AAAGGCCTTTATTGGCTGCTACATGTTATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGAGAC  614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  565  AAAGGCCTTTATTGGCTGCTACATGTTATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGAGAC  638

Query  615  AACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAGAAA  688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  639  AACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAGAAA  712

Query  689  GAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACG  762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  713  GAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACG  786

Query  763  AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGAGAGAAAAAAAACCAAAA  836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  787  AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGAGAGAAAAAAAACCAAAA  860

Query  837  AATGGAGAAAGACAGTGATGGCTGCCACCTGAAACATAAAATGGAGCATGAGCAAATAGAGACACAAGGCCAGG  910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  861  AATGGAGAAAGACAGTGATGGCTGCCACCTGAAACATAAAATGGAGCATGAGCAAATAGAGACACAAGGCCAGG  934

Query  911  TTAATCACAATGGCCAAAAAAATAATGAATTTGGACTAGTAGAAAATTATAAGGAGGCATTAACACAGCAGTTA  984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  935  TTAATCACAATGGCCAAAAAAATAATGAATTTGGACTAGTAGAAAATTATAAGGAGGCATTAACACAGCAGTTA  1008

Query  985  AAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAAAACTAAGAAACTAAGAAT  1058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009  AAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAAAACTAAGAAACTAAGAAT  1082

Query 1059  GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCC  1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1083  GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCC  1156

Query 1133  CTCCTCCTGTTGGCTGGGGAACCCCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCAT  1206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157  CTCCTCCTGTTGGCTGGGGAACCCCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCAT  1230

Query 1207  AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTGAT  1280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1231  AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTGAT  1304

Query 1281  CTCA----------------------------------------------------------------------  1284
            ||||                                                                      
Sbjct 1305  CTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAGGTGAACTGGGACATTCTTCTTTCTCAGAAG  1378

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1379  AAGAAACATCTTGTAAATTGATGACTGGGGCAAGATAACCATAATAATTTTAGTGAGAAGATTAATACTCAAGG  1452

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1453  ACCTGACTTGATAATTACTTATTTGTGTTTTTCATGGTTAAAAAAATAAAAGAAGCACAATGACCAGTACATGA  1526

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1527  AATCAGCATTTGGACCAAATTAGCAAGATTTACTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTT  1600

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1601  CTGAAGGAAAACTTTACAAAAAGAGCCAATGGACTCAGCACTTTCTTTACTATTTGTTCAATAGCCTATATTTC  1674

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1675  TAGATATTAAATATTTTTTGTAAGATATATGCACATAGAAGGGGGACTTCTAGGAATTTATAACCAAAATTTTA  1748

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1749  AAACTATTTTTATATTTTTTTAAATCTTTAAAAATTTTAATTACTGTGATATTGATTATACACCTTTTTTATAG  1822

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1823  ATGATTTGTTTAAATTATATCTGGAAAATAGAGTTGATTTACTTTCAGACATGAACTATACAAACAGGATATAT  1896

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1897  TTATATGGCTTGAGGTATGTTTTGTAATAGCGTTGTTCTTTAAGTGTACATCGTAATTTGACCTAATTTAAAAA  1970

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 1971  TAATATATTTTCGAAGTAGTAGATTCTCAGATCTTTATTCTAACAATTACATGATTTGAAAACAGTACTCAATG  2044

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2045  AGACTGGAAATACCTTTTGTACCTAAATGTTTTTTAAATTAATCAAAATACATTCTGTGAGATACTATTAAAAG  2118

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2119  TCTCAGTAAAGTCCTATTTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTCCCTATACTCCCTTGTTCCATC  2192

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2193  AGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAATTAAACTATGAAATTAAAGGCAG  2266

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2267  AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAACAGCTTGTGTACTAAAGTAA  2340

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2341  TGAGAATAAAAATGTTGGCCCAAAATTACTTTTATAAATAAATAATTCCAAAATAATTTCTTAATTTAAAATGA  2414

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2415  TAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAGACTAACTTCTAGATGTA  2488

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2489  TATTTTTAATAATAGATTCATAATGTTACATTTAATTGAAAACAAACCTTTATATCCAATGAAAATAGTATAAA  2562

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2563  CAGAATGATTTTTATACCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTA  2636

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2637  GTATCTGATAACATTAAGTACATTTTATGTCGTTTAATATAATTATTTACTTTAAAAATTGTACTTCAGAACAT  2710

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2711  CAGATTTTATTCACATTTTTTAACTCACTGAACTTTAATAATCAGGTCACCTGTACTCTAGTCAGCACTGTATA  2784

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2785  TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCTAAAA  2858

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2859  TTCGTAACAACCTAAATTTGAGAGGTGGCTGAAATGTGATGAAAAGCAATACGAAAAGACAATGTAAACTTTGA  2932

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 2933  AAAGGATTTTAGAGGGAAAATTGCATAGCTTTTTGTAACATTTACTTAATTTTAAAACTAAACTCATACTTTTG  3006

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3007  CTATCTTTTTAATATTTATCTCGTTTGGGAGTATACGTGTTTTTAAAATTTGTGTTTTCTATCTGTTTACTATA  3080

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3081  GTGTAGCTACTGGCTTCATTTAATAAAAATAAATGATTTTGAAATTAAATATAATATAGAATTCACATTTTATA  3154

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3155  TAGCTCTCTCAAAAATTAATTTTTATTCCTTAAGCATTTTAAAAACATTTTAAAAAATGTTTTGTAAATCCAGG  3228

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3229  TGTATTTTAACAATTAAATGCCTATTTTGTTATATGTTATACTTTTATTCTTAATTCTGAATTTTGACATTTTC  3302

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3303  ACACAATAAAAATAATTTATATCAATATTCTGTTTCTCTTTTCAATTGGTAGATTTAAATGATTTCCTTTGGGT  3376

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3377  AATAAAATAGGTAAAGATTTTAAAATATGATTATTGAAAAACAGTTTAAATCAGTAGATTAAAATAATGCATTT  3450

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3451  TTTTGATACTTTACACACAAAACTTTTTTCTCTCTGCAAGTTTTTATGTATGTGGGAAAGAATTTGTGATTTTA  3524

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3525  AATGCAGCTACAAATAGCATTTCACCATATGATGTTAGAGGATTTGATGTCTGTCTTGCGTTAAAGCTGTTGGT  3598

Query 1285  --------------------------------------------------------------------------  1284
                                                                                      
Sbjct 3599  CAACAGATATGTTTTTATGTATTTAAAAGAGGCTCTTGTGTGCCTTTATGTGTAAAATGCATATTACGTAGTAT  3672

Query 1285  ------------------------------------------------------  1284
                                                                  
Sbjct 3673  ACATGATATTGTATGTAACTGACTTCAAATATAAAACTATGCATAGAAACAACA  3726

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