Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05195
Subject:
XM_011512533.2
Aligned Length:
1339
Identities:
1193
Gaps:
146

Alignment

Query    1  ATGTTCAGTCTGATGGCCAGTTGCTGCGGCTGGTTCAAGCGGTGGCGGGAGCCTGTCAGAAAGGTGACTCTTTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GATGGTGGGACTTGATAATGCTGGTAAAACCGCAACAGCAAAGGGAATCCAAGGA-------------------  129
                             ||||||||||||||||||||||||||||||||||||||                   
Sbjct    1  -----------------ATGCTGGTAAAACCGCAACAGCAAAGGGAATCCAAGGAGTCCATGGAAAAATTGTCT  57

Query  130  ------------------------------------GAATACCCTGAAGATGTAGCTCCTACTGTTGGATTTTC  167
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct   58  TCTGCAAAACTGGTCCCTGGTGCTGCTGATCTAAAGGAATACCCTGAAGATGTAGCTCCTACTGTTGGATTTTC  131

Query  168  AAAAATTAACCTTAGACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGGGAGGTGGAATAAGAATTCGGGGAA  241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  132  AAAAATTAACCTTAGACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGGGAGGTGGAATAAGAATTCGGGGAA  205

Query  242  TCTGGAAGAATTACTATGCTGAATCCTATGGGGTAATATTTGTTGTGGATTCCAGTGATGAAGAGAGAATGGAA  315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  206  TCTGGAAGAATTACTATGCTGAATCCTATGGGGTAATATTTGTTGTGGATTCCAGTGATGAAGAGAGAATGGAA  279

Query  316  GAGACAAAAGAGGCTATGTCAGAAATGCTAAGACATCCTAGGATATCGGGAAAGCCTATATTGGTGTTGGCAAA  389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  280  GAGACAAAAGAGGCTATGTCAGAAATGCTAAGACATCCTAGGATATCGGGAAAGCCTATATTGGTGTTGGCAAA  353

Query  390  TAAACAAGATAAAGAAGGAGCTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTCTGGAAAAATTGGTCAATG  463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  354  TAAACAAGATAAAGAAGGAGCTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTCTGGAAAAATTGGTCAATG  427

Query  464  AGCACAAGTGCCTGTGTCAGATAGAACCATGTTCAGCAATCTCGGGGTATGGAAAGAAAATTGACAAGTCCATT  537
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  428  AGCACAAGTGCCTGTGTCAGATAGAACCATGTTCAGCAATCTCGGGGTATGGAAAGAAAATTGACAAGTCCATT  501

Query  538  AAAAAAGGCCTTTATTGGCTGCTACATGTTATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGA  611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  502  AAAAAAGGCCTTTATTGGCTGCTACATGTTATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGA  575

Query  612  GACAACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAG  685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  576  GACAACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAG  649

Query  686  AAAGAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCA  759
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  650  AAAGAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCA  723

Query  760  ACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGAGAGAAAAAAAACCA  833
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  724  ACGAATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGAGAGAAAAAAAACCA  797

Query  834  AAAAATGGAGAAAGACAGTGATGGCTGCCACCTGAAACATAAAATGGAGCATGAGCAAATAGAGACACAAGGCC  907
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  798  AAAAATGGAGAAAGACAGTGATGGCTGCCACCTGAAACATAAAATGGAGCATGAGCAAATAGAGACACAAGGCC  871

Query  908  AGGTTAATCACAATGGCCAAAAAAATAATGAATTTGGACTAGTAGAAAATTATAAGGAGGCATTAACACAGCAG  981
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  872  AGGTTAATCACAATGGCCAAAAAAATAATGAATTTGGACTAGTAGAAAATTATAAGGAGGCATTAACACAGCAG  945

Query  982  TTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAAAACTAAGAAACTAAG  1055
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  946  TTAAAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAAAACTAAGAAACTAAG  1019

Query 1056  AATGAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCAC  1129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020  AATGAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCAC  1093

Query 1130  CCCCTCCTCCTGTTGGCTGGGGAACCCCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACAT  1203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1094  CCCCTCCTCCTGTTGGCTGGGGAACCCCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACAT  1167

Query 1204  CATAATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGT  1277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1168  CATAATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGT  1241

Query 1278  GATCTCA  1284
            |||||||
Sbjct 1242  GATCTCA  1248

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