Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05241
Subject:
NR_134858.1
Aligned Length:
2449
Identities:
550
Gaps:
1885

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGCCCTTTCGGACTCGGTTATGGAGGAGGCCTTCCGCTCGCAGCGGCCTCTCCAGCACCCCTTTTAGGCCTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCACCCGCAGGGGTGCCCAGGCCGCACGCCAAACGCGGGCCCGCGCCGGTTACCTGGCTGCGCGCTCCCGCTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCTCGCGATTCTCCGGAATCGTACCTCTTCGTGGGCTCGCGCCAGCGCTGTGAGCGCACAATTAGTTTAAACT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATGGCCCCGCCCCCTCGCGCTGCCCTCTGATTGGCCTCTGTCGGCGGGGCCCGCTTAAGGACCCGGGAAAAGGA  296

Query    1  -----------------------------------------------------------ATGAA--CAAACGGG  13
                                                                       .||||  ||||..|.
Sbjct  297  AGTTTGAGGGCCACTGGGAAAGAGAAGGGGTATCACCGCTTCCGGACCCCGGCCTGTACTTGAAGGCAAAGAGA  370

Query   14  ACTATATGAA---CA--------------CTTCGGTACAGGAGCCCC-CTCTTGACTACTCCTTCAG-------  62
            ||||.|  ||   ||              |||       |.|||||| |.|.||||.|  .||..||       
Sbjct  371  ACTACA--AATCCCAGCGTCACCCGCGGCCTT-------GAAGCCCCGCCCCTGACAA--ACTGAAGGTCCCGG  433

Query   63  -AAGCATCCACGTCATT---------------------------------------------------------  78
             |||||| |.|||||.|                                                         
Sbjct  434  TAAGCAT-CGCGTCAGTACTTATGGCGCCTGCCGGGTTGTGGTGACGAAAGCAGTTGCCATGGAGTTGCTCTGA  506

Query   79  -----------------------CAA----------------------GATCTGGTAAATGAGGAGCCAAGGAC  107
                                   |||                      ||||||||||||||||||||||||||
Sbjct  507  GTAACCCTGAGGCAGTGGGACGCCAAGACTGGAGAGGAAGCGACTGCGGATCTGGTAAATGAGGAGCCAAGGAC  580

Query  108  AGGACTACGACCACTGAAGCGTTCAAAGTCGGGGAAATCACTGACCCAGTCCCTGTGGCTGAATAACAATGTTC  181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  581  AGGACTACGACCACTGAAGCGTTCAAAGTCGGGGAAATCACTGACCCAGTCCCTGTGGCTGAATAACAATGTTC  654

Query  182  TCAATGATCTGAGAGACTTCAACCAGGTGGCTTCACAGCTGTTGGAGCACCCAGAGAACCTGGCCTGGATCGAC  255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  655  TCAATGATCTGAGAGACTTCAACCAGGTGGCTTCACAGCTGTTGGAGCACCCAGAGAACCTGGCCTGGATCGAC  728

Query  256  CTGTCCTTTAATGACCTGACTTCCATTGACCCTGTCCTAACAACTTTCTTCAACCTGAGTGTCCTCTATCTTCA  329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  729  CTGTCCTTTAATGACCTGACTTCCATTGACCCTGTCCTAACAACTTTCTTCAACCTGAGTGTCCTCTATCTTCA  802

Query  330  CGGCAACAGCATCCAGCGCCTGGGGGAGGTGAATAAGCTGGCTGTCCTTCCTCGGCTCCGTAGCCTGACACTCC  403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  803  CGGCAACAGCATCCAGCGCCTGGGGGAGGTGAATAAGCTGGCTGTCCTTCCTCGGCTCCGTAGCCTGACACTCC  876

Query  404  ATGGGAACCCCATGGAGGAAGAGAAAGGGTATAGGCAATATGTGCTGTGCACCCTGTCCCGTATCACCACGTTC  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  877  ATGGGAACCCCATGGAGGAAGAGAAAGGGTATAGGCAATATGTGCTGTGCACCCTGTCCCGTATCACCACGTTC  950

Query  478  GACTTCAGTGGGGTCACCAAAGCAGACCGCACCACAGCTGAAGTCTGGAAACGCATGAACATCAAGCCCAAGAA  551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  951  GACTTCAGTGGGGTCACCAAAGCAGACCGCACCACAGCTGAAGTCTGGAAACGCATGAACATCAAGCCCAAGAA  1024

Query  552  GGCCTGGACCAAGCAGAATACACTT-------------------------------------------------  576
            |||||||||||||||||||||||||                                                 
Sbjct 1025  GGCCTGGACCAAGCAGAATACACTTTGAGGCTCCCACGACCCTAGTAGTCCTAAAGGCCTAAGCATAGACAGCA  1098

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1099  TGGTTTGACAATAAATAATTTGAGCTGTTGAGCAGATGAGAAGTCACTTACACCTTGTAGAGATGTTCTCTAAC  1172

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1173  TCAGGCAACTGCAAGTAGCTCTAGCCTTTTCTTTTCTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCACA  1246

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1247  CAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCAGCCTCCCAGGTTCAAGAGATTCTCCTGCCT  1320

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1321  CAGCCTCCCCAGTAGCTGTGATTAAAGGCGCCTGCCACCATGACTGGCTAATTTTGTTGTTGTTGTTGTTGTTT  1394

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1395  TGAGACGGTTTCACTCGTCACCCCAGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTGCTG  1468

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1469  GGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCTACCACATCCAGCTAAT  1542

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1543  TTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAA  1616

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1617  CTCCGCCTTCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTATAGGCACCTACTACCA  1690

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1691  CGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCCATCTCCTG  1764

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1765  ACCTTGTGATCCACCCACCTCGGCTTCCCCCAGCTAATTTTTTATATTTTAGTAGAGACAAGGTTTCGCCATGT  1838

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1839  TGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGTCTGCTTTGGCCTCCCAAAGTGCTGGGATTAGAA  1912

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1913  GCGTGAGCCACCACGCCCAGCCTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGCTGGT  1986

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 1987  CTCAAACTCCTGACCTCAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGATAAGCCACTGC  2060

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 2061  ACCTGGCCAGCTCTAGTCTTATTTTGCTGAAAAAGGGAGGCAATTGAGGGAAAGGCCTGCTGGCCTGGGACACT  2134

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 2135  GGAGACGTGGGTTTACCACACAGCCTTGGGAAATTTATCTAACTCTCTGGGCCCCTTTGTACTTTTCAGCTTAG  2208

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 2209  AGATTTGGGGGTTAAAGTAGATCAGTAATTTCCAAACTCTTCACAGAGTACCAGGGTCTGTAGAGATGCCTCAC  2282

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 2283  AGGCCTCCATGACAGGCCAAGAAGATGGCCTATGATCTCTGAAACCAGCCCCCACTTCAATCAGATCAAAGTAA  2356

Query  577  --------------------------------------------------------------------------  576
                                                                                      
Sbjct 2357  TTCCATTCTGTTTTATATGCTGGGATTCTGCTTAAGATTTCATTTGATAAAAAGAATCTTCTGCTTAAAAAAAA  2430

Query  577  -------  576
                   
Sbjct 2431  AAAAAAA  2437

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