Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05574
Subject:
NR_033144.1
Aligned Length:
1595
Identities:
350
Gaps:
1230

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGCAGCCCCGCGCACGCGCACGCGCGCCTCCACGGCTGGGTCGCGGCTGGAGTGAGGACGCGCTGTGTGGAGCA  74

Query    1  -------------------------------------------ATGTCTGCAACTCGAGCCAAGAAAGTGAAGA  31
                                                       |||||||||||||||||||||||||||||||
Sbjct   75  GCGGAGGCACGGCGCTGCTTCCACCGCTGCTCAGGAGGGGAGCATGTCTGCAACTCGAGCCAAGAAAGTGAAGA  148

Query   32  TGGCCACCAAATCATGCCCCGAGTGCGACCAACAGGTTCCTGTTGCATGTAAATCATGTCCTTGTGGTTACATA  105
            |||||||||||||.|||||||||||||||||                                           
Sbjct  149  TGGCCACCAAATCGTGCCCCGAGTGCGACCA-------------------------------------------  179

Query  106  TTTATTAGCAGAAAACTTTTAAATGCAAAACACTCAGAGAAATCACCACCTTCTACAGAAAACAAGCATGAGGC  179
                                                                  ||||||||||||||.|||||
Sbjct  180  ------------------------------------------------------ACAGAAAACAAGCACGAGGC  199

Query  180  CAAGAGGAGGCGAACAGAGAGAGTTAGGAGAGAGAAGATAAATTCTACAGTAAATAAAGATTTAGAAAACAGAA  253
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  200  CAAGAGGAGGCGAACAGAGAGAGTTAGGCGAGAGAAGATAAATTCTACAGTAAATAAAGATTTAGAAAACAGAA  273

Query  254  AGAGGTCTCGAAGTAACAGCCATTCAGATCATATCAGACGAGGAAGAGGAAGACCTAAAAGTGCATCTGCCAAA  327
            ||||.||||||||||||||||||||||||||||||||||||||.||||||.|||||||||||.||||.||||||
Sbjct  274  AGAGATCTCGAAGTAACAGCCATTCAGATCATATCAGACGAGGGAGAGGACGACCTAAAAGTTCATCCGCCAAA  347

Query  328  AAACATGAGGAAGAAAGAGAGAAACAGGAAAAGGAAATTGACATCTATGCTAACCTGTCTGATGAAAAGGCTTT  401
            |||||.||||||||.|||||.|||||||||||||||||.|||||||||||||||||.||||||||.||||||||
Sbjct  348  AAACACGAGGAAGAGAGAGAAAAACAGGAAAAGGAAATCGACATCTATGCTAACCTCTCTGATGAGAAGGCTTT  421

Query  402  CGTGTTTTCAGTCGCCTTGGCAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTC-------------  462
            ||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  422  CGTGTTTTCAGTTGCCTTGGCAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTCTGATATTTGTCTT  495

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct  496  CAAACTCTGTTGGTTGCCACTTTCTTCAGGATTGCATCAGCAGATCCTCAGGCAGTCGTGGACTCTGAGGAGCA  569

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct  570  CCAGACTGTGTGAATGAGGGCCTTTGGTTGCTTTCTCTGTTTCCTAGTCTGCTGCCACGCTTTGGGAGCAAAGC  643

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct  644  TGTGCGTTAGACTTTGCTGGGATTTCCTTGTTTACCAAGGATCATTATCAGTGTTTTGTGTTGGGATATTACTA  717

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct  718  AATGTATTTACAAAGACAAACAAACAAAATGACCAGAAAAGCCCCGGAACCTGGATGGGTCTTTCCCGATTGGA  791

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct  792  GGGACAGGAGTACGGGTGGAACACACAGCTGGAGCAGCTGACGTGCTTGCTAGTTTTCAGGTTCGCACCAGAGA  865

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct  866  TGCAGTGTCTTAAGTCCTGTCAGGAGAGTGACTTTTAAATGTATGTATTTCAGGCTTTCACCATTAACAGATTG  939

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct  940  CATATATACAATCCATTGACTTTTAATAAATTGGTAATTGATATTTTATTGAATGGAGAATTACGAATATAGAT  1013

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 1014  TATAAATTCTGTCTTTAATTGACCTTTTTCTTGGGCGCTATTTTAATGATTTAAGTAGGAGTTATATTTTCAGA  1087

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 1088  AACTTTCTAGACAGTTTGGAAATTTGGGTGCTATATGAAGAAAAGCATTTGAGGCTGTATCATATTTCAGATAT  1161

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 1162  AAACACCTTGTTTTCTTGAATGTTTTATTTATTGGTTTTTAAAAAAAACTTTTCTGTTATCAAGATGGTGCCTG  1235

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 1236  TTAACCTAAACACAGATATATTTATTATATAAATTGCAAAATATTTCTTAGCTACTTGTGAACAGTGATTTTTT  1309

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 1310  TTTGTCTGAATGTTCATTTATACATAATTCTGGTAATTATTTAAATTGTTACTTCATCCTGGAAAAAAATAAAC  1383

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 1384  CTTAATATTGAAAGCGAGTAGATTAAGTAGTGTGGTGTAGCTTTTTGTCCTAGTGAAGTTTGTAAAGTGTTTCA  1457

Query  463  -----------------------------------------  462
                                                     
Sbjct 1458  GCCAGTTTTTGCAGTATTAAATCATCATTCCTTATACTCGC  1498

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