Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05574
- Subject:
- NR_145836.2
- Aligned Length:
- 6837
- Identities:
- 424
- Gaps:
- 6404
Alignment
Query 1 ----------------ATGTCTGCAACTCGAGCCAAGAAAGTGAAGATGGCCACCAAATCATG-------CCCC 51
.|||||| |.||| |..||||.| | |||.
Sbjct 1 AGTGGCTTGGCGGCCGTTGTCTG----TGGAG-------------GGGGGCCTC--------GCCGGGCTCCCG 49
Query 52 GAGTGCGACCAACAGGTTCCTGTTGCATGTAAATCATGTCCTTGTGGTTACATATTTATTAGCAGAAAACTTTT 125
|||..|||.| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 50 GAGGCCGAGC----GGTTCCTGTTGCATGTAAATCATGTCCTTGTGGTTACATATTTATTAGCAGAAAACTTTT 119
Query 126 AAATGCAAAACACTCAGAGAAATCACCACCTTCTACAGAAAACAAGCATGAGGCCAAGAGGAGGCGAACAGAGA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 AAATGCAAAACACTCAGAGAAATCACCACCTTCTACAGAAAACAAGCATGAGGCCAAGAGGAGGCGAACAGAGA 193
Query 200 GAGTTAGGAGAGAGAAGATAAATTCTACAGTAAATAAAGATTTAGAAAACAGAAAGAGGTCTCGAAGTAACAGC 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 GAGTTAGGAGAGAGAAGATAAATTCTACAGTAAATAAAGATTTAGAAAACAGAAAGAGGTCTCGAAGTAACAGC 267
Query 274 CATTCAGATCATATCAGACGAGGAAGAGGAAGACCTAAAAGTGCATCTGCCAAAAAACATGAGGAAGAAAGAGA 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 268 CATTCAGATCATATCAGACGAGGAAGAGGAAGACCTAAAAGTGCATCTGCCAAAAAACATGAGGAAGAAAGAGA 341
Query 348 GAAACAGGAAAAGGAAATTGACATCTATGCTAACCTGTCTGATGAAAAGGCTTTCGTGTTTTCAGTCGCCTTGG 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 GAAACAGGAAAAGGAAATTGACATCTATGCTAACCTGTCTGATGAAAAGGCTTTCGTGTTTTCAGTCGCCTTGG 415
Query 422 CAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTC--------------------------------- 462
|||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTCTGATACTTGTTTGCAAAATCTGCTGAAACTTCT 489
Query 463 -------------------------------------------------------------------------- 462
Sbjct 490 GTCAGGATAACATCAGCAAATTCTCAAACAGTTATGGACTCTCAGGAGCATTCTGACTGCATCAATAAGGGCCA 563
Query 463 -------------------------------------------------------------------------- 462
Sbjct 564 TCGATTGTTTCTTTCTCGCCTGTCGTTTAGCCTGTGCCACACTTCGGGAGCAAAGCTGTGTAGGCTTGGACTGT 637
Query 463 -------------------------------------------------------------------------- 462
Sbjct 638 TCTGGGATTTCCTTGTTTACCAAGGAGTATTGTCAGTGTTTTGTGTTTGGGATATAAGTAAGTGTATTTGCCAA 711
Query 463 -------------------------------------------------------------------------- 462
Sbjct 712 CAACAAAAAAAAACCAACAAAAATGCTGGATGGATGTTAAAGGATAAAAAGTGATGGGGTATGGGGTAGGTATG 785
Query 463 -------------------------------------------------------------------------- 462
Sbjct 786 AAAACTAGGGTAATAAGATGCTTGATTGTTTTCAGGTTTGCCACCAGAGATGCAATATTTTAAATACTGTCAGA 859
Query 463 -------------------------------------------------------------------------- 462
Sbjct 860 AAGAGTGATTTTTAAAAATATATATTTCAGATTTTCAGTGCTAACAGATTGCATATATACAGTTCATTTACTTT 933
Query 463 -------------------------------------------------------------------------- 462
Sbjct 934 TATTAAATTGGCAATCGATATTTTATTGAATGGGGAATTAAGAATATAAACTGTAAATTTTGTCTTAAATTGAT 1007
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1008 TTTTTTTCTTGGCCTTTATTTTTATTACTTAAGGTATGAGTTATATTTTAGGAGATACTTTCTAGACAGTTTGA 1081
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1082 AGTTTGGGTGCTATATGAAGAAAAACATTTAATGATATACTCAGATATAAACACCTTGTTTTCTTGAATGTAAT 1155
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1156 TTATTTATTAGCTAAAAAAAAAAAACAAACTGCTCTCAAGATGGTGCCTGTTAACCTAAACATGAAATATATTT 1229
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1230 ATTACATGCAAAATATTTCTTAGCCACTTTTAAGCAGTAATGTTTTATCTGAATGGATATTTGTTTCTATATCC 1303
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1304 TGATAATTATTTAAATTGTTACTTTCAATCTGGAAGAAAAAATAAACCTTAATATTGAAACTAAGTAGATTAAA 1377
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1378 TAGTGTGATAAAAGTTTTTTGTTCTGGTGAAGTTTGTGAAATATATTTAAATTCTTAATTTTTCTAGTGTTAAG 1451
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1452 TCATAATCGTTTATAGTTGATTTATATTAAATGCTTTTGCATTTTGGCATATCAATTTAATGATTAACATATTC 1525
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1526 AAACTTGGTAATCACTCCCCTTATTTTCAGTCGCTCTTCCCCCAATCTGTTTAGAAATCCTTTTAAAGCCTTCT 1599
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1600 TACAGAAGATAGTCATCAGTTAGATTTAGCCCCCTTTTAAGAGAATCTCCCTTTCAATTTTAGCCGTAACATTA 1673
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1674 TCAATTTCAGACTTCATCCTGCATCTCCCATCACCTCCTCAAAGAAAAAAGGTCAACATTTTTTCCTACTTTAT 1747
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1748 TTAAATGGTAACCAGCAGAGGGAGCTTAAGAGGTACTCTAGATAGGATAAAGAATTTTCCTAAGGATTCCTTTT 1821
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1822 CCTTTAATCCCTGTATCTATCTGCAGGTACTACTGCAACTATTTTGTATGCATTTTATTTATTTATTTAGGAGA 1895
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1896 CAGAGTCTTGCTCGGTCGCCCAGGCTGGAGTGCAGTGGCACTGTCTCAGCTCACTGCAACCTCTGCCTCCTGGG 1969
Query 463 -------------------------------------------------------------------------- 462
Sbjct 1970 TTCAAGTGATTCTTATGCCTCAGCCTCCTGAGTAGCTGTGACTAGAGGCGTGCGCCACCACGCCTGGCTGTTTT 2043
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2044 TTTTTTTGTATTTTTTAGTACAGATGGGGTCTCAGCATGTTGGCCAGGCTGGTCTCAAATTCCTGGCCTTAGGT 2117
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2118 GATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACTCAGCCTTGTGTGCGTTT 2191
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2192 TAGAGTCTTAACTAGTAGTTTCCCCAATAATGTAATGTGATTTTATCTTTGAAACATACTGTAAGGAAACTTTT 2265
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2266 GATTTTAAGTAAAAAAGCTTAAAAATGATTAATATCTAAAAATGCTTGTATACATATATATGTCCTCAGAAAAA 2339
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2340 GCAAGAACAGCTTGTGGAATAAGCACGTCTTTAAGGAATTATCGATGTCAGAGTCTATCCATTTAAAGCTGAAG 2413
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2414 ACCATTACAGGAAAGTCATGTTAAAATATTCATTGGATATGGTAAAGGAGGTACTGGTGGCTGGGCTGGAGCTT 2487
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2488 GCCGTATAGAAAAGTAATTACTTCAGATCTCATAATGTTAAATTATTGGCTTATTTAAAAATTTCCGTGGCAGA 2561
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2562 GAGGCAAATTAGGTTTCCTCTGTGACATAACCTATTTAACCAATTTTTCAAAAAATTGTACTCTATGAGCTTTC 2635
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2636 TTGTTATAAAGCTAAAAAATTTAATTTGTCTAGGCATGTTGTAATGGTCCCAGAAAATATTACTTTGTCACTGG 2709
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2710 TGTCAGAGAAACCTCTGTCATCAGCAGATGTCCTAAGAGTATAATTATAGTTCTTTACTTAATCCAAAATTTGT 2783
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2784 TCTGCTCTGATATCTATAAATGATATGATTATTCAAAATACCTTGAAATGATTCCACAATTAGATTAGGTCTGT 2857
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2858 TGAAGATAACTTATTCTTAAATATGAGTAAGATTAAATAAAAGTAGTTTGAGAGTTGTTACTCCCTGCCTCAAC 2931
Query 463 -------------------------------------------------------------------------- 462
Sbjct 2932 TCCATGGTATTCCAAAATGTTTTTGTGGGCACTTTAATACTTGTAGTTTGATTTTGTTTGTTAGTTTTAGAAAT 3005
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3006 GAACATTTCTTAGATTTTCATGGGTATTTTTTGGCTGTATTTAAATGTAAATGATATAAAAGTAAGGGAAATTG 3079
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3080 TGCAAATTATTTCTTGTGTAGTAATCAGTGGAAGTGATCAAACAGCTTGAAGCAGTTTATGATGAGAAAATTTA 3153
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3154 AAATTGCAAATGACCTGAAAATTTAGCCAGTCTATTCTTATTTCTTTAAATTTCAGAAATACTTAAGAAAAAAA 3227
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3228 AAAAAAAGGTCAGTATGACCTCTGAGTTGCTTCCTAAAAGTAATCAGATAGTGTTCTCCCTCAGATAAGATTTC 3301
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3302 AAATTGAAAAGTATTTGACTTCTTTAACTCTAGTAATTGCACTTGATTCTCTAATTCTGATCATTAAAATGACT 3375
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3376 TGGCAATATTTAATTTTGGCTTGCCTTTCAATCTGCATGTTTGTCTTAAATTTAGAAAAATTAAGCTCTTTACT 3449
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3450 TACTTTTATATAAAGTATTAATTGGCCAGGCATGGTGGCTTACACCTGTAATCCCAACACTTTGGGAGGCCAAG 3523
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3524 GCAGGAGAGTTGTTTGAAGCCAGGAGTTTGAGACCAGCCTGGGCAACATGATGAGACCGCGTCTCTACAAAAAG 3597
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3598 TAAAATTAGCTGGGTGTGGTGCTTCCAGCTACTAGGCAGCTGAGGCTAAAGGATCACTTGAGCCCAGGAGTTCG 3671
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3672 AGGCTGCAGTGAGTGATGATCTTGCCACTGCACTCCAGCCTGGGAGGCAGAGCAAGAAACACCCTGTGTGAAAA 3745
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3746 AAGTATTGAATTTGTTTGATTCCACTTTCAAAATATGCTCTAGATACAGGTAGTCATTCTGCCAAATTGTGTTC 3819
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3820 TTCTCTAAAACATTTTGTCCGTCATTCTTTGAAACTCATTCTTAATTATTTCCACTTTACCTTCTAGTTTGGTT 3893
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3894 TGATGCCTTATATTCTTGCTAGTTAAAAGCATTTTTTCCCTAGTATTTTCTGTCTTTCTAGCCTTTAAGGCATA 3967
Query 463 -------------------------------------------------------------------------- 462
Sbjct 3968 TTGTTGTTAACAAATCTCTTATTTAAGTTAATTAAAGTTTTTTCTGTGCAGCTGGGTTTTTTCTTTTACTACAT 4041
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4042 GACAAGCTTCATTTTTACATTTGGAAGTACATGTATATATGTTTATATATTTTTATTCTCAGGATCTATTTTCT 4115
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4116 AGGGAACTATTTTTTTAAATTATTCTTTTGTGCTGCCTTAACCCATTTATTATAGTTTGAATATTAGTAGTACT 4189
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4190 TACTACTCAAAGATTACAACTATACTAATAACTATCCTAACATACAAAGCAGACTCTCCAGGATTAAAAGTATG 4263
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4264 AGACATATAACAGAGTCTGGAATAGAATAATTCTTTTTACCCCAGTCAAGTATTTGCCTTTTGCATTATTAAGG 4337
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4338 AATCTGTTTTGTTCTTTTATTGATAATTTCTATATTTTTTTCTTTGCCTTATTGCACTGGTTGGGACTTTTTGC 4411
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4412 CTTGATCCAGTTGTAGGGGGGAAACATTCAGTCATTAAGCATTAAATAACTTTGTTGTTGTTGTGGGCTTGAAA 4485
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4486 AAATACCCTTTAGTAGATTGAGGGTAGACTCTTTTATTTCTGCTTGTTGGAAGTTTTCTGTCAGGAACAGATGT 4559
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4560 TGAATTTTGTCAGATGCTTTTTCTGCATAATTGATAGGACCTTTTTTCTCCCCTTTAGAATGTTCATATGGTGA 4633
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4634 AACATACTGATAGCTTTTCTTTTCTTTTTTTTTTGACACGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAAT 4707
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4708 GGTGCGATCTTGGCTCACTGCACCCTCTGCCTCTTGGGTTCAAGCTTCCCTCACCAGCCTCCCAAGTACCTGGG 4781
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4782 TATACAGGTGTGCATCACCATGCCCGGCTAATTTTTGAATTTTTAGTAGAGATAGGTTTTTACCATGTTGGCCA 4855
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4856 GGCTGGTCTTCAACTCCTGACTCAGCCTCCCAAAGTGTTGGGATTACAGTCTCGCTCTGTCGCCCAGGCTGGAG 4929
Query 463 -------------------------------------------------------------------------- 462
Sbjct 4930 GGCAGTGGTGTGATCTTGGCTCAATGCAACCTTGCAACCTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTTA 5003
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5004 GCCTCCTGAGTAGCTGGAATTACAGGCGCACGCCACTACACCCAGCTTCTTTTTGTATTTTTAGTAGAGATGGA 5077
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5078 GTTTCACCATGTTGGCCAAGCTGGTCTCGAACTCCTGAGCTCCGGTGATCCACCCGCCTTTACAGGCATGAGCC 5151
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5152 ACCGTGCCCGGCTGCATTTCTCTTTTGTAAGAACCTGCTCTGGTTTATTGATATTTTGCTGTTTTTCTGTTTTA 5225
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5226 AGTTTCATTAATTTCTGATCTTTAGTATTTTCTCCTTTCTTTGCTTTGGGCTTATTTGCTCCCTTTTCTAGCTT 5299
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5300 ATTGTGGCGGAAGCTCAGATCATTGATTTTAAAATTTACTTATTTATTTATTTATTTATTTAATTCAACACTGA 5373
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5374 TCAGAAGGCTTTTTGTGCTTTTCTAAAAAAAGCATTTAATGCTATAAATTTCCCATTTGCTTTATCTCACAAAT 5447
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5448 TTTATTGTGTTGTAATTTTGTGTTCAATTTAGAATATTCTGATTTTTCTTGGTATTACTATAATTTTCAAATAT 5521
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5522 TTAGAGTTTTTTTCAGTTATCTTTCTGTTACTGATTGTAATTTATTGTTTTTTAAAATTATAGTTCTTTGAATA 5595
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5596 GTTTTGCAGTATTTGCTCTAGGGATTACTATAAACATACTTCACTTTTTACAGTTCACTTAGAAGTCAATATTT 5669
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5670 TACCAGTTCAAGTGGAATGTAGAAAAATCTTACCACTGTTTACATTCCTTTACCCTCTCCCCTTTATGTTATAA 5743
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5744 TTTTCTTATAAATCATAAGACTTGGCTGGGCACAGTGGCTCACCTGTAATCCCAGGACTGGGAGGCCGAGGCGA 5817
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5818 GCAGATTGCTTAAGTCCAGGAGTTCGAGACCAGCCTGGACAATGTGGTGAAACCCCAACTCTACAAAAAATACA 5891
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5892 CAAAATTAGCTAGGCGTGGTAGCATGTTCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGGAGGATTACTTG 5965
Query 463 -------------------------------------------------------------------------- 462
Sbjct 5966 AGCCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCACTCCACTCCACTCCAGCCTGAGTGACAGAGCTAGACAC 6039
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6040 TGTGTCTCAAAAAATAAAAATAAAAAATAAGACTCATCAGATAATGTATTTTTTCCTTACAACTATCATAGATA 6113
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6114 TTTTTAAGAACCCAAGAGGAAAACAGTCTATCACATTTACCACAATATTTATCATTTGTATTAATCTTCCTTAA 6187
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6188 TTCTTGATGTTCCAAGTTTACATAGGTATCAGTCCTTTTCATCTGGAAAATTTCTTTTAGTGCAGGTCTGTTGA 6261
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6262 CATTTAATTCTCTTATTTTTTCTTCATCTGAGAATGTCTTTATTTTGCCTTAATTCATGAAAGATATTTTTGCT 6335
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6336 GGATATAAACTACTGTGTTGACAGTTCTTTCAGCCTCCATGGTTTCTGATGAGAAATGTGCAGCCATTAAAGTA 6409
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6410 ATATTTCCCCTGTATGAAACATGTTATTTTTCTCTGAGTATTTTCAGGAATCTTTGTCTTTGGTTTTTATTGGT 6483
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6484 TTGATTATGATGTGCCCGGGTGTTTGAATTTATTCTCTTTGGGATTTGTTGAGCTTAAATGTGTAAGTTTATGC 6557
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6558 CTTTCATCAGATTATGTAAAGTTTTAAACCATTCAGATATTTTCTGCTCTACTTTCTCCTCCCTCTTAGGCTCC 6631
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6632 AGTGATGCAAGTGTTAGACTCTTTGGTATTATCTCACAGATCTCAGAACCTCTGTTCATTTATTTTATTTTAAT 6705
Query 463 -------------------------------------------------------------------------- 462
Sbjct 6706 AAATCATTTCAGTTAACAAAATCATATATTGTATGCAGCATGATGTTTCAATATGTATGTTCACATTGTAGGAT 6779
Query 463 ----------------------------- 462
Sbjct 6780 GTCTAAAGTAAAGATAATGAACATATGCA 6808