Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_001099694.2
Aligned Length:
1771
Identities:
435
Gaps:
1280

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTACATGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGCCAGGCATGGCTCTTCCTCAGGGACGCTTGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTCAGGGATGTGGCTATAGAATTCTCATTGGCAGAGTGGAAATTCCTGAACCCTGCGCAGAGGGCTTTGTACA  148

Query    1  -----------------------------------------------------------ATGATGAAGGAGTTC  15
                                                                       ||||||||||||.||
Sbjct  149  GGGAAGTGATGTTGGAGAACTACAGGAACCTGGAGGCTGTGGATATCTCTTCCAAACGCATGATGAAGGAGGTC  222

Query   16  TCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAG  89
            |..||.||||.||||||||||||||||||||||||||||||||..||||||||||||||||||.||||||.|.|
Sbjct  223  TTGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGATGTTGCAAAGACATGAAAGTTATCACACTGG  296

Query   90  AGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATG  163
            ||||||||||||||||||||||||.||||||||||||.|||||||||||||||..|||.||||.|||||.||||
Sbjct  297  AGATTTTTGCTTCCAGGAAATTGAAAAAGATATTCATGACTTTGAGTTTCAGTCACAAAAAGATGAAAGAAATG  370

Query  164  GTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGCTGGA  237
            |.||.||||||.|||||.||.|||||||||||||||..|||||.||||||||||||||||||||||||||||||
Sbjct  371  GCCATGAAGCATCCATGCCAAAAATCAAAGAGTTGATGGGTAGCACAGACCGACATGATCAAAGGCATGCTGGA  444

Query  238  AACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGA  311
            ||||||||||||||||||||||||||||..||||||||||.||||||.|||||||||||||||||||||||.||
Sbjct  445  AACAAGCCTATTAAAGATCAGCTTGGATTAAGCTTTCATTTGCATCTTCCTGAACTCCACATATTTCAGCCCGA  518

Query  312  ATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTT  385
            |..||||||||.|||||||||.|||||||||.|||.|.||||.||||.|||||..|||||||||||||||||||
Sbjct  519  AGAGAAAATTGCTAATCAAGTGGAGAAGTCTGTCAACGATGCTTCCTCAATTTCAACATCCCAAAGAATTTCTT  592

Query  386  GTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTG  459
            ||||.||..||||.|.||.|.|||||||||||||||||||||...|||||||.|||||||.||.||||||| ..
Sbjct  593  GTAGGCCTGAAACACATACTCCTAATAACTATGGGAATAATTTTTTCCATTCATCATTACTCACACAAAAA-CA  665

Query  460  GGAAGTACACATGAGAGAAAAATCTTTCCAATG-----------------------------------------  492
            |||||||||||||||||||||||||||||||||                                         
Sbjct  666  GGAAGTACACATGAGAGAAAAATCTTTCCAATGTAATGAGACTGGCGAAGCCTTTAATTGTAGCTCATTTGTAA  739

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  740  GGAAACATCAGATAATCCATTTAGGAGAAAAACAATATAAATTTGATATATGTGGCAAAGTCTTTAATGAGAAG  813

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  814  CGATACCTTGCACGCCATCGTAGATGTCACACTAGTGAGAAACCTTACAAGTGTAATGAATGTGGAAAGTCCTT  887

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  888  CAGTTACAAGTCATCCCTGACATGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAATGTG  961

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  962  GAAAGTCCTTCAGTTACAAGTCATCCCTTACATGCCATCATAGGTGTCACACTGGTGAGAAACCTTACAAGTGT  1035

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1036  AATGAATGTGGAAAGTCCTTCAGTTACAAGTCATCCCTTAGATGCCATCGTAGACTTCATACTGGAATAAAACC  1109

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1110  TTACAAGTGTAATGAGTGTGGCAAGATGTTTGGTCAAAATTCAACCCTTGTAATTCATAAGGCAATTCATACTG  1183

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1184  GAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGTCATCATAGA  1257

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1258  CTTCATACTGGAGAGAAACCTTACAAGTGTAATGACTGTGGTAAGGCTTTTATTCATCAGTCAAGCCTTGCACG  1331

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1332  TCATCATAGACTTCATACTGGAGAGAAATCTTACAAATGTGAAGAATGTGACAGAGTTTTCAGTCAGAAATCAA  1405

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1406  ACCTTGAGAGACACAAGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTCACAAGACCTTCAGT  1479

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1480  CACAGGTCATCTCTTCCATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAATGAATGTGGGAA  1553

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1554  GACTTTTAATGTACAGTCACACCTTTCACGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTAAGG  1627

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1628  TTTGTGACAAGGCTTTCATGTGCCATTCTTATCTGGCAAACCATACTAGAATTCATAGCGGAGAGAAACCTTAC  1701

Query  493  ---------------------------------------------------------------------  492
                                                                                 
Sbjct 1702  AAGTGTAATGAGTGTGGTAAGGCTCACAATCACTTGATTGATTCATCAATCAAGCCTTGCATGTCATCA  1770

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