Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_001202457.2
Aligned Length:
1965
Identities:
422
Gaps:
1485

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTACGTGAGGAAGCCACCAAGAAGAGCAAAGAAAAGGAGCCAGGGATGGCTCTTCCTCAGGGACGCTTGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTCAGGGATGTGGCTATAGAGTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTTTATACA  148

Query    1  -----------------------------------------------------------ATGATGAAGGAGTTC  15
                                                                       |||||   |||||||
Sbjct  149  GGGCTGTGATGTTGGAGAACTACAGGAACCTGGAGTTTGTGGATAGCTCTTTAAAATCCATGAT---GGAGTTC  219

Query   16  TCATCCA-CAGCGCAAGGCAATAC---AGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACA  85
            |||||.| ||| |||..|.|.|||   |||||||||||||||||||||.||||||||||||.||||||||||||
Sbjct  220  TCATCAACCAG-GCACAGTATTACAGGAGAAGTGATCCACACAGGGACGTTGCAAAGACATAAAAGTCATCACA  292

Query   86  TTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGG  159
            ||.|||||||||||||||..|||||..||||||||||||||.||||||||||||||||||||||||..|||||.
Sbjct  293  TTGGAGATTTTTGCTTCCCAGAAATGAAGAAAGATATTCATCACTTTGAGTTTCAGTGGCAAGAAGTTGAAAGA  366

Query  160  AATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGC  233
            |||||.||.|||||||||||||||.||||||||.|||||||||||||||||||||||..||||||.||||||||
Sbjct  367  AATGGCCATGAAGCACCCATGACAAAAATCAAAAAGTTGACTGGTAGTACAGACCGAAGTGATCACAGGCATGC  440

Query  234  TGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGC  307
            ||||||||||||||||||||||||||||||||..||||||||||||||||||||||||||||||||.||||||.
Sbjct  441  TGGAAACAAGCCTATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTCCACATGTTTCAGA  514

Query  308  CTGAATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTA-ATTTTGACATCCCAAAGAAT  380
            ||.||.||||||||.||||.|||.|.||.||||||   |||..|||.||||.| .||..|| ||||||||||||
Sbjct  515  CTAAAGGGAAAATTAGTAACCAATTGGACAAGTCT---ATCGGTGCTTCCTCAGCTTCAGA-ATCCCAAAGAAT  584

Query  381  TTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAA  454
            |||||||||.|.||||||.|.||||||||||||.||||||||.||||.|||||||||||||||   ||.|||||
Sbjct  585  TTCTTGTAGGCTCAAAACTCATATTTCTAATAAGTATGGGAAGAATTTCCTCCATTCTTCATT---CACACAAA  655

Query  455  AATTGGGAAGTACACATGAGAGAAAAATCTTTCCAATG------------------------------------  492
            .| ..||||.||..|||||||||||||.|||.||||.|                                    
Sbjct  656  TA-CAGGAAATATGCATGAGAGAAAAACCTTGCCAAAGTAATGAGTGTGGCAAAGCCTTTAATTATAGCTCACT  728

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  729  CTTAAGGAGACACCACATAACCCATTCAAGAGAGAGAGAATATAAATGTGATGTATGTGGCAAGATCTTTAATC  802

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  803  AGAAGCAATACATTGTATATCATCATAGATGTCACACTGGTGAGAAAACTTACAAGTGTAATGAGTGTGGGAAG  876

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  877  ACCTTCACTCAGATGTCATCCCTTGTATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGA  950

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  951  GTGTGGCAAGACCTTCAGTGAGAAGTCATCCCTTAGATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACA  1024

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1025  AGTGTAATGAGTGTGGCAAGACTTTTGGTCGAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAG  1098

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1099  AAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGAAATCATCCCTTCAATGCCATCATATACTTCA  1172

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1173  CACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAATGTTTACATTCGCAGATCACACCTTGAAAGACATA  1246

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1247  GGAAGATTCATACTGGAGAGGGATCATACAAATGTAAGGTTTGTGACAAGGTTTTCCGGAGTGATTCATACCTT  1320

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1321  GCAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACAAGTGTAATAAATGTGGCAGGAGTTTCAGTCGGAA  1394

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1395  GTCATCCCTTCAATACCATCATACACTTCACACTGGAGAGAAACCTTACACATGTAATGAATGTGGCAAGGTTT  1468

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1469  TTAGTCGAAGAGAAAACCTTGCACGTCATCATAGACTTCATGCTGGAGAGAAACCTTACAAATGTGAAGAATGT  1542

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1543  GACAAAGTTTTCAGTCGCAGATCACACCTTGAAAGACATAGGAGAATTCATACTGGGGAAAAACCATACAAATG  1616

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1617  TAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCATGCCTTGCAAACCATACGAGAGTTCATACTGGAGAGAAAC  1690

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1691  CTTACAAGTGTAATAAATGTGCGAAGGTTTTTAATCAAAAAGGAATCCTTGCACAACATCAGAGAGTTCATACT  1764

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1765  GGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAGCAAGCCTTGCAAAACATCAGAG  1838

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1839  AGTTCATACTGCAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTACTGGACAGTCAACACTTATTC  1912

Query  493  -----------------------------------------  492
                                                     
Sbjct 1913  ACCATCAAGCAATCCATGGGTGTAGGGAAACTTTACAAATG  1953

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