Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_001321522.1
Aligned Length:
2913
Identities:
450
Gaps:
2424

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTCTTTCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAAGAGTGGAAGTGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCT  148

Query    1  -----------ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTG  63
                       ||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  149  CTTCCAAATGCATGATGAAGGAGTTCTCATCAACAGCACAAGGCAATACAGAAGTGATCCACACAGGGACATTG  222

Query   64  CAAAGACATGAAAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTT  137
            ||||||||||||.|||||||||||.||||||||||||||||||||||.|||||||||||||||.|.||||||||
Sbjct  223  CAAAGACATGAACGTCATCACATTGGAGATTTTTGCTTCCAGGAAATGGAGAAAGATATTCATGATTTTGAGTT  296

Query  138  TCAGTGGCAAGAAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAG  211
            |||||||.|||||||.|||||.|||.|.||.||||||||||||||||||||||||.|||||||.|||||||||.
Sbjct  297  TCAGTGGAAAGAAGATGAAAGAAATAGCCATGAAGCACCCATGACAGAAATCAAACAGTTGACGGGTAGTACAA  370

Query  212  ACCGACATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTG  285
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  371  ACCGACATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTCATTCGCATCTG  444

Query  286  CCTGAACTCCACATATTTCAGCCTGAATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTT  359
            ||||||||||||||.||||||.|.|||.|||||||||||||||||||||||||||||||||.||.|||.||.||
Sbjct  445  CCTGAACTCCACATGTTTCAGACCGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAGTGCTTCGTT  518

Query  360  AATTTTGACATCCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCC  433
            ..|||..|||||||||||||||||||||||.||.|||||||..||||||||.||||||||||||||||.|||..
Sbjct  519  GGTTTCAACATCCCAAAGAATTTCTTGTAGGCCTAAAACCCACATTTCTAAGAACTATGGGAATAATTTCCTGA  592

Query  434  ATTCTTCATTACCCATACAAAAATTG--GGAAGTACACATGAGAGAAAAATCTTTCCAATG-------------  492
            ||||||||||||.||.||||||   |  |||||||||||||||||||||||||||||||||             
Sbjct  593  ATTCTTCATTACTCACACAAAA---GCAGGAAGTACACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGC  663

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  664  AAAGCCTTTAATTATAGCTCAGTCTTAAGGAAACATCAGATAATCCATTTAGGAGCGAAACAATATAAATGTGA  737

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  738  TGTGTGTGGCAAGGTCTTTAATCAAAAGCGATATCTTGCATGTCATCGTAGATGTCACACTGGCAAGAAACCTT  811

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  812  ACAAGTGTAATGATTGTGGCAAGACCTTCAGTCAGGAGTTAACCCTTACATGCCATCATAGACTTCATACTGGA  885

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  886  GAGAAACATTACAAGTGCAGTGAGTGTGGCAAGACCTTCAGTCGAAATTCAGCCCTTGTAATTCATAAGGCAAT  959

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  960  TCATACTGGAGAGAAATCTTACAAGTGTAATGAATGTGGCAAGACCTTCAGTCAAACGTCATACCTTGTGTACC  1033

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1034  ATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAAC  1107

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1108  CTTGAAAGACATAGGAAAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGCAGCAGGACCTTTAGTCG  1181

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1182  GAAGTCATCCCTTACACGCCATCGTAGACTTCATACTGGAGAGAAACCTTATAAGTGTAATGATTGTGGCAAGA  1255

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1256  CCTTCAGTCAGATGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAA  1329

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1330  TGTGATGAAGCTTTCAGTTTCAAATCGAACCTTGAAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAA  1403

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1404  GTGTAATGATTGTGGCAAGACCTTCAGTCAGACATCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGA  1477

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1478  AACCTTACAAATGTGAAGAATGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATAGGATAATTCAT  1551

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1552  ACTGGAGAGAAACTTTACAAGTGTAATGAATGTGGCAAGACCTTTAGTCGGAAGTCATCCCTTACACGCCATTG  1625

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1626  TAGACTTCATACTGGAGAGAAACCTTACCAGTGTAATGAGTGTGGCAAAGCCTTTCGTGGGCAGTCAGCACTTA  1699

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1700  TTTACCATCAAGCAATCCATGGTATAGGGAAACTTTACAAATGTAATGATTGTCACCAAGTCTTTAGTAATGCT  1773

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1774  ACAACCATTGCAAATCATTGGAGAATCCATAATGAAGAGAGATCGTACAAGTGTAATAGATGTGGCAAATTTTT  1847

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1848  CAGACATCGTTCATACCTTGCAGTTCATTGGCGAACTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTG  1921

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1922  ATGAAGCTTTCAGTTTCAAATCAAACCTTCAAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAGGTGT  1995

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1996  AATGAATGTGGCAAGACCTTTAGTCGGAAGTCATACCTTACATGCCATCGTAGACTTCATACTGGAGAGAAACC  2069

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2070  TTACAAGTGTAATGAGTGTGGCAAGACCTTCGGTCGAAATTCAGCCCTTATAATTCACAAGGCAATTCATACTG  2143

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2144  GAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGGCCTTCAGTCAGAAGTCATCCCTTACATGCCATCTTAGA  2217

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2218  CTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCAAGCCTTGAAAA  2291

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2292  ACACAGGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTTGGGCGTGATTCAC  2365

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2366  ACCTGGCACAACATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGAACTTCCGT  2439

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2440  CACAATTCAGCCCTTGTAATTCATAAGGCAATTCATAGTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAA  2513

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2514  GACCTTCCGTCACAATTCAGCCCTTGAAATTCATAAGGCAATTCATACTGGAGAAAAACCTTACAAGTGTAGTG  2587

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2588  AATGTGGCAAGGTTTTTAATAGAAAAGCAAACCTTTCACGTCATCATAGACTTCATACTGGAGAGAAACCTTAC  2661

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2662  AAGTGTAATAAATGTGGTAAGGTTTTTAATCAACAAGCACACCTTGCATGTCATCATAGAATTCATACTGGAGA  2735

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2736  GAAACCTTACAAGTGTAATGAGTGTGGCAAAACCTTCCGTCACAATTCAGTCCTTGTAATTCATAAGACAATTC  2809

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2810  ATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAAGCAAAACTTGCACGTCAT  2883

Query  493  ---------------------------  492
                                       
Sbjct 2884  CATAGAATTCATACTGGAAAGAAACAT  2910

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