Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_001348157.2
Aligned Length:
1330
Identities:
439
Gaps:
839

Alignment

Query    1  -----------------------------------------------ATG----ATGAAGGAGTTCTCATCCAC  23
                                                           |||    |||||||||||||||||.||
Sbjct    1  ATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGGTATCTCTTCCAAATGCACAATGAAGGAGTTCTCATCAAC  74

Query   24  AGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAGAGATTTTT  97
            |||.||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||
Sbjct   75  AGCACAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAACGTCATCACATTGGAGATTTTT  148

Query   98  GCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATGGTCACGAA  171
            .||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||.|||
Sbjct  149  CCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGATGAAAGAAATGGCCATGAA  222

Query  172  GCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGCTGGAAACAAGCC  245
            ||||||||||||.||||||||.|.||||..|||||||||||.|.|.|||||||.||||||||||||||||||||
Sbjct  223  GCACCCATGACAAAAATCAAAAAATTGATGGGTAGTACAGAGCAATATGATCACAGGCATGCTGGAAACAAGCC  296

Query  246  TATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGAATGGAAAA  319
            |||||||.|||||||||||||.|||||||||||.||||||.||||||||||||||||||||||..||.||||||
Sbjct  297  TATTAAATATCAGCTTGGATCAAGCTTTCATTCACATCTGTCTGAACTCCACATATTTCAGCCCAAAGGGAAAA  370

Query  320  TTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTTGTAGTCCC  393
            ||..|||||||||.|||||||||||||.|.||||.||||...|||..|||.|||||||||||||||||||.|||
Sbjct  371  TTAATAATCAAGTGGAGAAGTCTATCAACGATGCTTCCTCGGTTTCAACAGCCCAAAGAATTTCTTGTAGGCCC  444

Query  394  AAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAAGTAC  467
            |||||||.|||.|||||||||||||||.||||||..||..|||.||||||||.||.|||||.| ..||||||||
Sbjct  445  AAAACCCATATATCTAATAACTATGGGGATAATTTTCTGAATTATTCATTACTCACACAAAGA-CAGGAAGTAC  517

Query  468  ACATGAGAGAAAAATCTTTCCAATG-------------------------------------------------  492
            .||||||||||||||||||||||||                                                 
Sbjct  518  GCATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAAGCCTTTAATTATAGCTCACTCTTAAGGAAACAT  591

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  592  CAGATTATTCATCTAGGAGAGAAACAATATAAATGTGATGTATGTGACAAGGTCTTTATTCGGAAGCGATACCT  665

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  666  TGCACGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGTCCTTCAGTCAGA  739

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  740  TGTCATCCCTTACATATCATCATCGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCT  813

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  814  TTCAGACACAATTCAGCCCTTCAAAGACATAGGAGAATTCATACTGGAGAGAAACCACATAAGTGTAATGAGTG  887

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  888  TGGCAAGACCTTTAGTCAGAAGTCATACCTTGCATGCCATCGTAGCATTCATACTGGAAAGAAACCTTACGAAT  961

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  962  GTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAACCTTGAAAGTCATAGGATAACTCATACTGGAGAGAAA  1035

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1036  CCATACAAGTGTAATGATTGTGGCAAGACCTTCAGTCATATGTCAACCCTTACATGCCATCGTAGACTTCATAC  1109

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1110  TGGAGAGAAACCTTACAAGTGTGAAGAATGTGATGAAGCTTTCCGTTTCAAATCAAGTCTTGAAAGACATAGGA  1183

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1184  GAATTCATAATGGAGAGAAACTGTACAAATGTAATGAGTGTGGCAAGACCTTCAGTCAGGAGTTATCCCTTACC  1257

Query  493  ------------------------------------------------------------------------  492
                                                                                    
Sbjct 1258  TGCCATTGTAGACTTCATAGTGGAGAGAAACCTTGCAAGTGTGGAGAATGTGACAAGGCTTACAGTTTCAAA  1329

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