Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_001369762.1
Aligned Length:
1997
Identities:
443
Gaps:
1507

Alignment

Query    1  ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGA  74
            |||||||||...||||..||.||||.|||||||||||||||||.|.|||||||||||||||||||||||||.|.
Sbjct    1  ATGATGAAGACATTCTTCTCAACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGC  74

Query   75  AAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAG  148
            |||||||||||||.|||||||||||||||||.|||||||||||||.||||||..|||..|||||||||||.|||
Sbjct   75  AAGTCATCACATTGGAGATTTTTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAG  148

Query  149  AAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGAT  222
            ||||.||||..||||..||.|.|||||||||||||||||||||||||||||||||||||||||.||.|||||||
Sbjct  149  AAGATGAAACAAATGACCATGCAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATGAT  222

Query  223  CAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCA  296
            ||||||||||||||||||||||.||||||||||||||||||||..||||||||||||||||||||||||||.||
Sbjct  223  CAAAGGCATGCTGGAAACAAGCATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCA  296

Query  297  CATATTTCAGCCTGAATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACAT  370
            ||||||||||||||||.|||||||||||||||||||||||||||||||||.||||||.||||.|.|||..||||
Sbjct  297  CATATTTCAGCCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACAT  370

Query  371  CCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTA  444
            ||||||||||||.||||||.||||||||||.||||||||||||.|||||.||||||||||||||||||||||||
Sbjct  371  CCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTA  444

Query  445  CCCATACAAAAATTGGGAA-GTACACATGAGAGAAAAATCTTTCCAATG-------------------------  492
            |.||.|||||||  .|||| |||||||||||||||||||||||||||||                         
Sbjct  445  CTCACACAAAAA--CGGAATGTACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAAT  516

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  517  TGTAGCTCACTTTTAAAAAAACATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAA  590

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  591  GGTATTTAATCAGAAGCGATACCTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATG  664

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  665  AGTGTGGCAAGATCTTTGGTCACAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTAT  738

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  739  GAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGG  812

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  813  GAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTC  886

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  887  ACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCAT  960

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  961  CGTAGGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCT  1034

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1035  TGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATATA  1108

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1109  ATTCATACCTGGCAAAACATAGTATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTT  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  TTTAATCAACAATCAACTCTTGCACGCCATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAATG  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  TGACAAAGTTTTCAGGTGCAAATCACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAAT  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  GTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAA  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  CCATACATGTGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATAC  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  TGCAGAGAAACCGTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGA  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  GGATTCATACTGGAGAGAAACCGTACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCA  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  CAACATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATC  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  ATCGCTTATAATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCA  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  GTCAGATGTCATCCCTCGTATACCATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGC  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  AAGGTTTTTAATCAACAAGCACACCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAA  1922

Query  493  -------------------------------------------------------------------------  492
                                                                                     
Sbjct 1923  TGAGTGTGGCAAGACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCT  1995

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